CircRNA Information

General Information
circRNA Basic Information
CircID chr1:108699312|108699542
Strand +
CircType exon
Host Gene ENSG00000134186.10;
Algorism CIRI2;
Sequence CTTTCTCTTGATCGCTCTCTCTCTTTTTCTCGTTCATTTCCTCTTTCCTTATCATAGTCACGATCTCGTCTTCTACCTCTCTCATTTTCTTTCTCTCTTTCTCGATCCCTGTCCCTTCTATCCCCTTTCCTATCACGACTTCGACTGCGACTTCTATGCCTTTCCCTACTTCTGCTGCGCCTGCGTTCTAACCCCCGGTCAATACTTCGGGATCTTCGCCGTTCTTTCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:108699312|108699542 hsa-let-7b-5p 0 0 1
chr1:108699312|108699542 hsa-let-7b-3p 0 0 1
chr1:108699312|108699542 hsa-let-7c-5p 0 0 1
chr1:108699312|108699542 hsa-let-7c-3p 0 0 1
chr1:108699312|108699542 hsa-let-7d-5p 0 0 1
chr1:108699312|108699542 hsa-let-7d-3p 0 0 1
chr1:108699312|108699542 hsa-let-7e-5p 0 0 1
chr1:108699312|108699542 hsa-let-7e-3p 0 0 1
chr1:108699312|108699542 hsa-miR-98-5p 0 0 1
chr1:108699312|108699542 hsa-miR-98-3p 0 0 1
chr1:108699312|108699542 hsa-let-7g-5p 0 0 1
chr1:108699312|108699542 hsa-let-7g-3p 0 0 1
chr1:108699312|108699542 hsa-let-7i-5p 0 0 1
chr1:108699312|108699542 hsa-let-7i-3p 0 0 1
chr1:108699312|108699542 hsa-miR-335-5p 0 0 1
chr1:108699312|108699542 hsa-miR-335-3p 0 0 1
chr1:108699312|108699542 hsa-miR-583 0 0 1
chr1:108699312|108699542 hsa-miR-638 1 0 1
chr1:108699312|108699542 hsa-miR-298 1 0 1
chr1:108699312|108699542 hsa-miR-922 0 0 1
chr1:108699312|108699542 hsa-let-7a 0 0 1
chr1:108699312|108699542 hsa-let-7f 0 0 1
chr1:108699312|108699542 hsa-miR-602 1 0 0
chr1:108699312|108699542 hsa-miR-637 1 0 0
chr1:108699312|108699542 hsa-miR-663a 1 0 0
chr1:108699312|108699542 hsa-miR-762 1 0 0
chr1:108699312|108699542 hsa-miR-765 1 0 0
chr1:108699312|108699542 hsa-miR-936 1 0 0
chr1:108699312|108699542 hsa-miR-3125 1 0 0
chr1:108699312|108699542 hsa-miR-3132 1 0 0
chr1:108699312|108699542 hsa-miR-3138 1 0 0
chr1:108699312|108699542 hsa-miR-3153 1 0 0
chr1:108699312|108699542 hsa-miR-3154 1 0 0
chr1:108699312|108699542 hsa-miR-3175 1 0 0
chr1:108699312|108699542 hsa-miR-3196 1 0 0
chr1:108699312|108699542 hsa-miR-3197 1 0 0
chr1:108699312|108699542 hsa-miR-4298 1 0 0
chr1:108699312|108699542 hsa-miR-4257 1 0 0
chr1:108699312|108699542 hsa-miR-4270 1 0 0
chr1:108699312|108699542 hsa-miR-4271 1 0 0
chr1:108699312|108699542 hsa-miR-4281 1 0 0
chr1:108699312|108699542 hsa-miR-3665 1 0 0
chr1:108699312|108699542 hsa-miR-3916 1 0 0
chr1:108699312|108699542 hsa-miR-3937 1 0 0
chr1:108699312|108699542 hsa-miR-3945 1 0 0
chr1:108699312|108699542 hsa-miR-4418 1 0 0
chr1:108699312|108699542 hsa-miR-4428 1 0 0
chr1:108699312|108699542 hsa-miR-4450 1 0 0
chr1:108699312|108699542 hsa-miR-4458 1 0 0
chr1:108699312|108699542 hsa-miR-4476 1 0 0
chr1:108699312|108699542 hsa-miR-4479 1 0 0
chr1:108699312|108699542 hsa-miR-4489 1 0 0
chr1:108699312|108699542 hsa-miR-4496 1 0 0
chr1:108699312|108699542 hsa-miR-2392 1 0 0
chr1:108699312|108699542 hsa-miR-4516 1 0 0
chr1:108699312|108699542 hsa-miR-4533 1 0 0
chr1:108699312|108699542 hsa-miR-3976 1 0 0
chr1:108699312|108699542 hsa-miR-4644 1 0 0
chr1:108699312|108699542 hsa-miR-4688 1 0 0
chr1:108699312|108699542 hsa-miR-4739 1 0 0
chr1:108699312|108699542 hsa-miR-4767 1 0 0
chr1:108699312|108699542 hsa-miR-4784 1 0 0
chr1:108699312|108699542 hsa-miR-5090 1 0 0
chr1:108699312|108699542 hsa-miR-5093 1 0 0
chr1:108699312|108699542 hsa-miR-5192 1 0 0
chr1:108699312|108699542 hsa-miR-5194 1 0 0
chr1:108699312|108699542 hsa-miR-5703 1 0 0
chr1:108699312|108699542 hsa-miR-5739 1 0 0
chr1:108699312|108699542 hsa-miR-6085 1 0 0
chr1:108699312|108699542 hsa-miR-6086 1 0 0
chr1:108699312|108699542 hsa-miR-6088 1 0 0
chr1:108699312|108699542 hsa-miR-6090 1 0 0
chr1:108699312|108699542 hsa-miR-6124 1 0 0
chr1:108699312|108699542 hsa-miR-6127 1 0 0
chr1:108699312|108699542 hsa-miR-6133 1 0 0
chr1:108699312|108699542 hsa-miR-6134 1 0 0
chr1:108699312|108699542 hsa-miR-6165 1 0 0
chr1:108699312|108699542 hsa-miR-7150 1 0 0
chr1:108699312|108699542 hsa-miR-8052 1 0 0
chr1:108699312|108699542 hsa-miR-8085 1 0 0
chr1:108699312|108699542 hsa-miR-12114 1 0 0
chr1:108699312|108699542 hsa-miR-12118 1 0 0
chr1:108699312|108699542 hsa-miR-12120 1 0 0
chr1:108699312|108699542 hsa-miR-12128 1 0 0
chr1:108699312|108699542 hsa-miR-211-3p 1 0 0
chr1:108699312|108699542 hsa-miR-4433b-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6734-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6809-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4433a-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6857-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6728-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6833-5p 1 0 0
chr1:108699312|108699542 hsa-miR-1236-5p 1 0 0
chr1:108699312|108699542 hsa-miR-5187-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6807-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6757-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6873-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4695-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6746-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4709-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6730-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6820-5p 1 0 0
chr1:108699312|108699542 hsa-miR-3622b-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6721-5p 1 0 0
chr1:108699312|108699542 hsa-miR-197-5p 1 0 0
chr1:108699312|108699542 hsa-miR-7845-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6716-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6732-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6798-5p 1 0 0
chr1:108699312|108699542 hsa-miR-3126-5p 1 0 0
chr1:108699312|108699542 hsa-miR-486-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6760-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6881-5p 1 0 0
chr1:108699312|108699542 hsa-miR-2467-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6782-5p 1 0 0
chr1:108699312|108699542 hsa-miR-3150b-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6810-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6835-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4640-5p 1 0 0
chr1:108699312|108699542 hsa-miR-885-3p 1 0 0
chr1:108699312|108699542 hsa-miR-1228-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4650-3p 1 0 0
chr1:108699312|108699542 hsa-miR-4690-5p 1 0 0
chr1:108699312|108699542 hsa-miR-92b-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4713-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6834-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4787-5p 1 0 0
chr1:108699312|108699542 hsa-miR-149-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6824-5p 1 0 0
chr1:108699312|108699542 hsa-miR-3162-5p 1 0 0
chr1:108699312|108699542 hsa-miR-3925-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6878-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6892-5p 1 0 0
chr1:108699312|108699542 hsa-miR-5010-5p 1 0 0
chr1:108699312|108699542 hsa-miR-5584-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6864-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6895-5p 1 0 0
chr1:108699312|108699542 hsa-miR-423-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6499-5p 1 0 0
chr1:108699312|108699542 hsa-miR-483-5p 1 0 0
chr1:108699312|108699542 hsa-miR-5197-3p 1 0 0
chr1:108699312|108699542 hsa-miR-3124-5p 1 0 0
chr1:108699312|108699542 hsa-miR-181d-3p 1 0 0
chr1:108699312|108699542 hsa-miR-1207-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4763-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6778-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6787-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6865-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6870-5p 1 0 0
chr1:108699312|108699542 hsa-miR-5001-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6743-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6752-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6754-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6803-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6813-5p 1 0 0
chr1:108699312|108699542 hsa-miR-7110-5p 1 0 0
chr1:108699312|108699542 hsa-miR-1249-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6751-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6788-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6797-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6808-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6875-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6879-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4728-5p 1 0 0
chr1:108699312|108699542 hsa-miR-5196-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6780b-5p 1 0 0
chr1:108699312|108699542 hsa-miR-10396b-5p 1 0 0
chr1:108699312|108699542 hsa-miR-10526-3p 1 0 0
chr1:108699312|108699542 hsa-miR-1909-3p 1 0 0
chr1:108699312|108699542 hsa-miR-3689a-3p 1 0 0
chr1:108699312|108699542 hsa-miR-4649-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4725-3p 1 0 0
chr1:108699312|108699542 hsa-miR-4745-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4749-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6738-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6794-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4436b-3p 1 0 0
chr1:108699312|108699542 hsa-miR-4697-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6831-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6511a-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6511b-5p 1 0 0
chr1:108699312|108699542 hsa-miR-3940-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6731-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6739-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6758-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6856-5p 1 0 0
chr1:108699312|108699542 hsa-miR-1914-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6855-5p 1 0 0
chr1:108699312|108699542 hsa-miR-3173-3p 1 0 0
chr1:108699312|108699542 hsa-miR-3679-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6891-5p 1 0 0
chr1:108699312|108699542 hsa-miR-4716-3p 1 0 0
chr1:108699312|108699542 hsa-miR-6859-5p 1 0 0
chr1:108699312|108699542 hsa-miR-3619-5p 1 0 0
chr1:108699312|108699542 hsa-miR-6838-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:108699312|108699542
ORF Type ORF1
Protein Length 41
Nucleotide Length 123
Protein Sequence MSLLSPFLSRLRLRLLCLSLLLLRLRSNPRSILRDLRRSFS
Nucleotide Sequence CTGTCCCTTCTATCCCCTTTCCTATCACGACTTCGACTGCGACTTCTATGCCTTTCCCTACTTCTGCTGCGCCTGCGTTCTAACCCCCGGTCAATACTTCGGGATCTTCGCCGTTCTTTCTCC
CircID chr1:108699312|108699542
ORF Type ORF2
Protein Length 74
Nucleotide Length 222
Protein Sequence MIALSLFLVHFLFPYHSHDLVFYLSHFLSLFLDPCPFYPLSYHDFDCDFYAFPYFCCACVLTPGQYFGIFAVLS
Nucleotide Sequence TTGATCGCTCTCTCTCTTTTTCTCGTTCATTTCCTCTTTCCTTATCATAGTCACGATCTCGTCTTCTACCTCTCTCATTTTCTTTCTCTCTTTCTCGATCCCTGTCCCTTCTATCCCCTTTCCTATCACGACTTCGACTGCGACTTCTATGCCTTTCCCTACTTCTGCTGCGCCTGCGTTCTAACCCCCGGTCAATACTTCGGGATCTTCGCCGTTCTTTCT
CircID chr1:108699312|108699542
ORF Type ORF3
Protein Length 28
Nucleotide Length 84
Protein Sequence MREVEDEIVTMIRKEEMNEKKRESDQEK
Nucleotide Sequence ATGAGAGAGGTAGAAGACGAGATCGTGACTATGATAAGGAAAGAGGAAATGAACGAGAAAAAGAGAGAGAGCGATCAAGAGAAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab