CircRNA Information

General Information
circRNA Basic Information
CircID chr1:109631194|109631316
Strand -
CircType exon
Host Gene ENSG00000116337.14;
Algorism CIRI2;
Sequence CACGTTTTGTCCTCAGACCCCGCCCATGCTGTGTGGTCTCTGCATGTCTCCATTCTTCTCTGTCTCTGTCTTGCATGTCTCCTACCATGTCACTGTCCCTGGGCCACCCAGTGAAAGCAAAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:109631194|109631316 hsa-miR-663b 0 0 1
chr1:109631194|109631316 hsa-miR-1293 1 0 1
chr1:109631194|109631316 hsa-miR-1253 0 0 1
chr1:109631194|109631316 hsa-miR-1224-5p 0 0 1
chr1:109631194|109631316 hsa-miR-663 0 0 1
chr1:109631194|109631316 hsa-miR-492 1 0 0
chr1:109631194|109631316 hsa-miR-608 0 1 0
chr1:109631194|109631316 hsa-miR-641 0 1 0
chr1:109631194|109631316 hsa-miR-650 1 0 0
chr1:109631194|109631316 hsa-miR-663a 1 0 0
chr1:109631194|109631316 hsa-miR-762 1 0 0
chr1:109631194|109631316 hsa-miR-1303 1 0 0
chr1:109631194|109631316 hsa-miR-1268a 1 0 0
chr1:109631194|109631316 hsa-miR-1270 1 0 0
chr1:109631194|109631316 hsa-miR-3138 1 0 0
chr1:109631194|109631316 hsa-miR-3141 1 0 0
chr1:109631194|109631316 hsa-miR-4298 1 0 0
chr1:109631194|109631316 hsa-miR-1268b 1 0 0
chr1:109631194|109631316 hsa-miR-4428 1 0 0
chr1:109631194|109631316 hsa-miR-4436a 1 0 0
chr1:109631194|109631316 hsa-miR-4462 1 0 0
chr1:109631194|109631316 hsa-miR-4499 1 0 0
chr1:109631194|109631316 hsa-miR-4506 1 0 0
chr1:109631194|109631316 hsa-miR-4507 1 0 0
chr1:109631194|109631316 hsa-miR-4533 1 0 0
chr1:109631194|109631316 hsa-miR-1587 1 0 0
chr1:109631194|109631316 hsa-miR-3976 1 0 0
chr1:109631194|109631316 hsa-miR-4644 1 0 0
chr1:109631194|109631316 hsa-miR-4651 1 0 0
chr1:109631194|109631316 hsa-miR-4654 1 0 0
chr1:109631194|109631316 hsa-miR-4689 1 0 0
chr1:109631194|109631316 hsa-miR-4696 0 1 0
chr1:109631194|109631316 hsa-miR-4706 1 0 0
chr1:109631194|109631316 hsa-miR-4784 1 0 0
chr1:109631194|109631316 hsa-miR-5091 1 1 0
chr1:109631194|109631316 hsa-miR-5190 0 1 0
chr1:109631194|109631316 hsa-miR-5739 1 0 0
chr1:109631194|109631316 hsa-miR-5787 1 0 0
chr1:109631194|109631316 hsa-miR-6075 1 0 0
chr1:109631194|109631316 hsa-miR-6076 1 0 0
chr1:109631194|109631316 hsa-miR-6088 1 0 0
chr1:109631194|109631316 hsa-miR-6134 1 0 0
chr1:109631194|109631316 hsa-miR-6863 1 0 0
chr1:109631194|109631316 hsa-miR-8085 1 0 0
chr1:109631194|109631316 hsa-miR-8089 1 0 0
chr1:109631194|109631316 hsa-miR-9500 1 0 0
chr1:109631194|109631316 hsa-miR-12128 1 1 0
chr1:109631194|109631316 hsa-miR-211-3p 1 1 0
chr1:109631194|109631316 hsa-miR-92a-2-5p 1 0 0
chr1:109631194|109631316 hsa-miR-7155-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6728-5p 1 0 0
chr1:109631194|109631316 hsa-miR-1236-5p 1 0 0
chr1:109631194|109631316 hsa-miR-4695-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6820-5p 1 0 0
chr1:109631194|109631316 hsa-miR-3622b-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6806-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6721-5p 1 0 0
chr1:109631194|109631316 hsa-miR-7845-5p 1 1 0
chr1:109631194|109631316 hsa-miR-6742-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6793-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6796-5p 1 0 0
chr1:109631194|109631316 hsa-miR-3190-3p 1 0 0
chr1:109631194|109631316 hsa-miR-6770-5p 1 0 0
chr1:109631194|109631316 hsa-miR-3126-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6760-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6782-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6888-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6810-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6786-5p 1 0 0
chr1:109631194|109631316 hsa-miR-1229-5p 1 0 0
chr1:109631194|109631316 hsa-miR-193b-5p 0 1 0
chr1:109631194|109631316 hsa-miR-4640-5p 1 0 0
chr1:109631194|109631316 hsa-miR-1228-5p 1 1 0
chr1:109631194|109631316 hsa-miR-92b-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6847-5p 1 1 0
chr1:109631194|109631316 hsa-miR-6824-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6800-5p 1 0 0
chr1:109631194|109631316 hsa-miR-3678-3p 0 1 0
chr1:109631194|109631316 hsa-miR-744-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6801-5p 1 0 0
chr1:109631194|109631316 hsa-miR-7113-5p 0 1 0
chr1:109631194|109631316 hsa-miR-6767-5p 1 0 0
chr1:109631194|109631316 hsa-miR-4520-3p 1 0 0
chr1:109631194|109631316 hsa-miR-1207-5p 1 0 0
chr1:109631194|109631316 hsa-miR-1233-5p 1 0 0
chr1:109631194|109631316 hsa-miR-4763-3p 1 0 0
chr1:109631194|109631316 hsa-miR-6769b-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6778-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6787-5p 1 1 0
chr1:109631194|109631316 hsa-miR-6816-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6743-5p 1 1 0
chr1:109631194|109631316 hsa-miR-6756-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6779-5p 1 0 0
chr1:109631194|109631316 hsa-miR-3620-5p 1 0 0
chr1:109631194|109631316 hsa-miR-4728-5p 1 0 0
chr1:109631194|109631316 hsa-miR-10396b-5p 1 1 0
chr1:109631194|109631316 hsa-miR-1237-5p 1 0 0
chr1:109631194|109631316 hsa-miR-1909-3p 1 0 0
chr1:109631194|109631316 hsa-miR-4649-5p 1 0 0
chr1:109631194|109631316 hsa-miR-4726-5p 1 0 0
chr1:109631194|109631316 hsa-miR-4745-5p 1 0 0
chr1:109631194|109631316 hsa-miR-4749-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6729-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6883-5p 1 0 0
chr1:109631194|109631316 hsa-miR-1910-3p 1 0 0
chr1:109631194|109631316 hsa-miR-6511a-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6758-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6856-5p 1 0 0
chr1:109631194|109631316 hsa-miR-4646-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6884-5p 1 0 0
chr1:109631194|109631316 hsa-miR-6764-5p 0 1 0
chr1:109631194|109631316 hsa-miR-2682-5p 1 0 0
chr1:109631194|109631316 hsa-miR-4536-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:109631194|109631316
ORF Type ORF1
Protein Length 35
Nucleotide Length 108
Protein Sequence MSSDPAHAVWSLHVSILLCLCLACLLPCHCPWATQ
Nucleotide Sequence TTGTCCTCAGACCCCGCCCATGCTGTGTGGTCTCTGCATGTCTCCATTCTTCTCTGTCTCTGTCTTGCATGTCTCCTACCATGTCACTGTCCCTGGGCCACCCAGTGA
CircID chr1:109631194|109631316
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MLCGLCMSPFFSVSVLHVSYHVTVPGPPSESK
Nucleotide Sequence ATGCTGTGTGGTCTCTGCATGTCTCCATTCTTCTCTGTCTCTGTCTTGCATGTCTCCTACCATGTCACTGTCCCTGGGCCACCCAGTGAAAGCAAA
CircID chr1:109631194|109631316
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MVGDMQDRDREEWRHAETTQHGRGLRTKR
Nucleotide Sequence ATGGTAGGAGACATGCAAGACAGAGACAGAGAAGAATGGAGACATGCAGAGACCACACAGCATGGGCGGGGTCTGAGGACAAAACGT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab