CircRNA Information

General Information
circRNA Basic Information
CircID chr1:11247844|11248011
Strand +
CircType exon
Host Gene ENSG00000198793.11;
Algorism CIRI2;
Sequence AAAACCTCGTCACATTACCCCCTTCACCAGTTTCCAGGCTGTACAGCCCCAGCAGTCAAATGCCTTGGTGGGGCTGCTGGGGTACAGCTCTCACCAAGGCCTCATGGGATTTGGGACCTCCCCCAGTCCAGCTAAGTCCACCCTGGTGGAGAGCCGGTGTTGCAGAGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:11247844|11248011 hsa-miR-422a 0 0 1
chr1:11247844|11248011 hsa-miR-605-5p 0 0 1
chr1:11247844|11248011 hsa-miR-605-3p 0 0 1
chr1:11247844|11248011 hsa-miR-625-5p 0 0 1
chr1:11247844|11248011 hsa-miR-625-3p 0 0 1
chr1:11247844|11248011 hsa-miR-637 0 0 1
chr1:11247844|11248011 hsa-miR-943 0 0 1
chr1:11247844|11248011 hsa-miR-1275 0 0 1
chr1:11247844|11248011 hsa-miR-1288-5p 0 0 1
chr1:11247844|11248011 hsa-miR-1288-3p 0 0 1
chr1:11247844|11248011 hsa-miR-875-3p 0 1 1
chr1:11247844|11248011 hsa-miR-582-3p 0 0 1
chr1:11247844|11248011 hsa-miR-378 0 0 1
chr1:11247844|11248011 hsa-miR-1269 0 0 1
chr1:11247844|11248011 hsa-miR-1254 0 0 1
chr1:11247844|11248011 hsa-miR-614 1 0 0
chr1:11247844|11248011 hsa-miR-658 1 0 0
chr1:11247844|11248011 hsa-miR-762 1 0 0
chr1:11247844|11248011 hsa-miR-665 1 0 0
chr1:11247844|11248011 hsa-miR-1299 1 0 0
chr1:11247844|11248011 hsa-miR-1321 1 0 0
chr1:11247844|11248011 hsa-miR-378b 0 1 0
chr1:11247844|11248011 hsa-miR-3154 1 0 0
chr1:11247844|11248011 hsa-miR-3165 1 0 0
chr1:11247844|11248011 hsa-miR-378c 0 1 0
chr1:11247844|11248011 hsa-miR-3936 1 0 0
chr1:11247844|11248011 hsa-miR-4463 1 0 0
chr1:11247844|11248011 hsa-miR-4466 1 0 0
chr1:11247844|11248011 hsa-miR-4496 1 0 0
chr1:11247844|11248011 hsa-miR-4510 1 0 0
chr1:11247844|11248011 hsa-miR-4516 1 0 0
chr1:11247844|11248011 hsa-miR-1587 1 0 0
chr1:11247844|11248011 hsa-miR-4675 0 1 0
chr1:11247844|11248011 hsa-miR-4710 1 0 0
chr1:11247844|11248011 hsa-miR-5192 1 0 0
chr1:11247844|11248011 hsa-miR-5194 1 0 0
chr1:11247844|11248011 hsa-miR-6127 1 0 0
chr1:11247844|11248011 hsa-miR-6745 0 1 0
chr1:11247844|11248011 hsa-miR-7515 1 0 0
chr1:11247844|11248011 hsa-miR-12114 1 0 0
chr1:11247844|11248011 hsa-miR-138-5p 1 0 0
chr1:11247844|11248011 hsa-miR-134-5p 1 0 0
chr1:11247844|11248011 hsa-miR-370-3p 1 0 0
chr1:11247844|11248011 hsa-miR-6734-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6765-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6825-5p 0 1 0
chr1:11247844|11248011 hsa-miR-8071 0 1 0
chr1:11247844|11248011 hsa-miR-6804-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6515-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6089 1 0 0
chr1:11247844|11248011 hsa-miR-6880-5p 1 0 0
chr1:11247844|11248011 hsa-miR-7847-3p 1 0 0
chr1:11247844|11248011 hsa-miR-6890-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6732-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6805-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6881-5p 0 1 0
chr1:11247844|11248011 hsa-miR-7855-5p 0 1 0
chr1:11247844|11248011 hsa-miR-6835-5p 1 1 0
chr1:11247844|11248011 hsa-miR-4738-3p 1 0 0
chr1:11247844|11248011 hsa-miR-6753-5p 0 1 0
chr1:11247844|11248011 hsa-miR-7156-3p 1 0 0
chr1:11247844|11248011 hsa-miR-6741-3p 0 1 0
chr1:11247844|11248011 hsa-let-7a-2-3p 0 1 0
chr1:11247844|11248011 hsa-miR-6787-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6812-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6870-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6752-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6756-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6842-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6851-5p 1 0 0
chr1:11247844|11248011 hsa-miR-7107-5p 1 0 0
chr1:11247844|11248011 hsa-miR-7110-5p 1 0 0
chr1:11247844|11248011 hsa-miR-1249-5p 1 0 0
chr1:11247844|11248011 hsa-miR-3620-5p 1 0 0
chr1:11247844|11248011 hsa-miR-4728-5p 1 0 0
chr1:11247844|11248011 hsa-miR-5196-5p 1 0 0
chr1:11247844|11248011 hsa-miR-10526-3p 1 0 0
chr1:11247844|11248011 hsa-miR-328-5p 1 0 0
chr1:11247844|11248011 hsa-miR-4685-5p 1 0 0
chr1:11247844|11248011 hsa-miR-4725-3p 1 0 0
chr1:11247844|11248011 hsa-miR-4745-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6794-5p 1 0 0
chr1:11247844|11248011 hsa-miR-6858-5p 1 0 0
chr1:11247844|11248011 hsa-miR-3116 0 1 0
chr1:11247844|11248011 hsa-miR-378a-3p 0 1 0
chr1:11247844|11248011 hsa-miR-4472 1 0 0
chr1:11247844|11248011 hsa-miR-5009-5p 0 1 0
chr1:11247844|11248011 hsa-miR-320c 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:11247844|11248011
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence MVGLLGYSSHQGLMGFGTSPSPAKSTLVESRCCR
Nucleotide Sequence TTGGTGGGGCTGCTGGGGTACAGCTCTCACCAAGGCCTCATGGGATTTGGGACCTCCCCCAGTCCAGCTAAGTCCACCCTGGTGGAGAGCCGGTGTTGCAGA

CircID chr1:11247844|11248011
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MYSPSSQMPWWGCWGTALTKASWDLGPPPVQLSPPWWRAGVAE
Nucleotide Sequence CTGTACAGCCCCAGCAGTCAAATGCCTTGGTGGGGCTGCTGGGGTACAGCTCTCACCAAGGCCTCATGGGATTTGGGACCTCCCCCAGTCCAGCTAAGTCCACCCTGGTGGAGAGCCGGTGTTGCAGAG

CircID chr1:11247844|11248011
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MYPSSPTKAFDCWGCTAWKLVKGVM
Nucleotide Sequence CTGTACCCCAGCAGCCCCACCAAGGCATTTGACTGCTGGGGCTGTACAGCCTGGAAACTGGTGAAGGGGGTAATGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites