CircNet

General Information

circRNA Basic Information

CircID	chr1:116392861\|116392988
Strand	+
CircType	exon
Host Gene	ENSG00000163399.14;
Algorism	CIRI2;
Sequence	CTGGTACTTGTTGGTGGAGTTGAAGGGTATCTCGACGATTTTGGCGTATCTTTCTCTCATCTCCTTCACGGAACCACAGCACAGCTCTATGCACTTTAAGAGTGCTGACTCAGAGGCATCTCCTGCAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:116392861\|116392988	hsa-miR-17-5p	0	0	1
chr1:116392861\|116392988	hsa-miR-17-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-20a-5p	0	0	1
chr1:116392861\|116392988	hsa-miR-20a-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-93-5p	0	0	1
chr1:116392861\|116392988	hsa-miR-93-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-106a-5p	0	0	1
chr1:116392861\|116392988	hsa-miR-106a-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-143-5p	0	0	1
chr1:116392861\|116392988	hsa-miR-143-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-106b-5p	0	0	1
chr1:116392861\|116392988	hsa-miR-106b-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-20b-5p	0	0	1
chr1:116392861\|116392988	hsa-miR-20b-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-519d-5p	0	0	1
chr1:116392861\|116392988	hsa-miR-519d-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-1286	0	0	1
chr1:116392861\|116392988	hsa-miR-1252-5p	0	0	1
chr1:116392861\|116392988	hsa-miR-1252-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-519b-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-519c-3p	0	0	1
chr1:116392861\|116392988	hsa-miR-153	0	0	1
chr1:116392861\|116392988	hsa-miR-519a	0	0	1
chr1:116392861\|116392988	hsa-miR-4252	1	1	0
chr1:116392861\|116392988	hsa-miR-3916	0	1	0
chr1:116392861\|116392988	hsa-miR-5702	0	1	0
chr1:116392861\|116392988	hsa-miR-218-1-3p	0	1	0
chr1:116392861\|116392988	hsa-miR-4768-3p	0	1	0
chr1:116392861\|116392988	hsa-miR-6888-5p	0	1	0
chr1:116392861\|116392988	hsa-miR-6849-5p	1	0	0
chr1:116392861\|116392988	hsa-miR-4653-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:116392861\|116392988
ORF Type	ORF1
Protein Length	32
Nucleotide Length	99
Protein Sequence	LVLVGGVEGYLDDFGVSFSHLLHGTTAQLYAL
Nucleotide Sequence	CTGGTACTTGTTGGTGGAGTTGAAGGGTATCTCGACGATTTTGGCGTATCTTTCTCTCATCTCCTTCACGGAACCACAGCACAGCTCTATGCACTTTAA

CircID	chr1:116392861\|116392988
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MLVELKGISTILAYLSLISFTEPQHSSMHFKSADSEASPA
Nucleotide Sequence	TTGTTGGTGGAGTTGAAGGGTATCTCGACGATTTTGGCGTATCTTTCTCTCATCTCCTTCACGGAACCACAGCACAGCTCTATGCACTTTAAGAGTGCTGACTCAGAGGCATCTCCTGCA

CircID	chr1:116392861\|116392988
ORF Type	ORF3
Protein Length	26
Nucleotide Length	78
Protein Sequence	MWFREGDERKIRQNRRDTLQLHQQVP
Nucleotide Sequence	CTGTGGTTCCGTGAAGGAGATGAGAGAAAGATACGCCAAAATCGTCGAGATACCCTTCAACTCCACCAACAAGTACCA

CircID	chr1:116392861\|116392988
ORF Type	ORF4
Protein Length	28
Nucleotide Length	84
Protein Sequence	MCCGSVKEMRERYAKIVEIPFNSTNKYQ
Nucleotide Sequence	CTGTGCTGTGGTTCCGTGAAGGAGATGAGAGAAAGATACGCCAAAATCGTCGAGATACCCTTCAACTCCACCAACAAGTACCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information