CircRNA Information

General Information
circRNA Basic Information
CircID chr1:11942370|11942560
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGTCTGCAACACACATTCCTTCCCCTAAAGAGGCCTCCAGTCTACCTCCTCCAGGAAGCCCTCCTTAATCTCATCCCATGTGGTCACTCCTTTGCACGTGCAGTCTTGGTTTGCCCAGTAGTTGACGTATTGGTACAAACCTGCTCCTTCTCCCTCTGCCAGGCCAGGGCCACATCTTTATTTCCTTGGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:11942370|11942560 hsa-let-7b-5p 0 0 1
chr1:11942370|11942560 hsa-let-7b-3p 0 0 1
chr1:11942370|11942560 hsa-let-7c-5p 0 0 1
chr1:11942370|11942560 hsa-let-7c-3p 0 0 1
chr1:11942370|11942560 hsa-let-7d-5p 0 0 1
chr1:11942370|11942560 hsa-let-7d-3p 0 0 1
chr1:11942370|11942560 hsa-let-7e-5p 0 0 1
chr1:11942370|11942560 hsa-let-7e-3p 0 0 1
chr1:11942370|11942560 hsa-miR-19a-5p 0 0 1
chr1:11942370|11942560 hsa-miR-19a-3p 0 0 1
chr1:11942370|11942560 hsa-miR-98-5p 0 0 1
chr1:11942370|11942560 hsa-miR-98-3p 0 0 1
chr1:11942370|11942560 hsa-let-7g-5p 0 0 1
chr1:11942370|11942560 hsa-let-7g-3p 0 0 1
chr1:11942370|11942560 hsa-let-7i-5p 0 0 1
chr1:11942370|11942560 hsa-let-7i-3p 0 0 1
chr1:11942370|11942560 hsa-miR-206 0 0 1
chr1:11942370|11942560 hsa-miR-379-5p 0 0 1
chr1:11942370|11942560 hsa-miR-379-3p 0 0 1
chr1:11942370|11942560 hsa-miR-328-5p 0 0 1
chr1:11942370|11942560 hsa-miR-328-3p 0 0 1
chr1:11942370|11942560 hsa-miR-527 0 0 1
chr1:11942370|11942560 hsa-miR-598-5p 0 0 1
chr1:11942370|11942560 hsa-miR-598-3p 0 0 1
chr1:11942370|11942560 hsa-miR-606 0 0 1
chr1:11942370|11942560 hsa-miR-612 0 0 1
chr1:11942370|11942560 hsa-miR-613 0 0 1
chr1:11942370|11942560 hsa-miR-650 0 0 1
chr1:11942370|11942560 hsa-miR-657 0 0 1
chr1:11942370|11942560 hsa-miR-765 0 0 1
chr1:11942370|11942560 hsa-miR-663b 1 0 1
chr1:11942370|11942560 hsa-miR-1291 0 0 1
chr1:11942370|11942560 hsa-miR-1255a 0 0 1
chr1:11942370|11942560 hsa-miR-1252-5p 0 0 1
chr1:11942370|11942560 hsa-miR-1252-3p 0 0 1
chr1:11942370|11942560 hsa-miR-1324 0 0 1
chr1:11942370|11942560 hsa-miR-576-3p 0 0 1
chr1:11942370|11942560 hsa-miR-518a-5p 0 0 1
chr1:11942370|11942560 hsa-miR-516a-3p 0 0 1
chr1:11942370|11942560 hsa-miR-1255b 0 0 1
chr1:11942370|11942560 hsa-let-7a 0 0 1
chr1:11942370|11942560 hsa-let-7f 0 0 1
chr1:11942370|11942560 hsa-miR-1285 0 0 1
chr1:11942370|11942560 hsa-miR-19b 0 0 1
chr1:11942370|11942560 hsa-miR-1 0 0 1
chr1:11942370|11942560 hsa-miR-151-3p 0 0 1
chr1:11942370|11942560 hsa-miR-588 1 0 0
chr1:11942370|11942560 hsa-miR-658 1 0 0
chr1:11942370|11942560 hsa-miR-1183 1 0 0
chr1:11942370|11942560 hsa-miR-2861 1 0 0
chr1:11942370|11942560 hsa-miR-3132 1 0 0
chr1:11942370|11942560 hsa-miR-3138 1 0 0
chr1:11942370|11942560 hsa-miR-3141 1 0 0
chr1:11942370|11942560 hsa-miR-3154 1 0 0
chr1:11942370|11942560 hsa-miR-4270 1 0 0
chr1:11942370|11942560 hsa-miR-3652 1 0 0
chr1:11942370|11942560 hsa-miR-4498 1 0 0
chr1:11942370|11942560 hsa-miR-4505 1 0 0
chr1:11942370|11942560 hsa-miR-4510 1 0 0
chr1:11942370|11942560 hsa-miR-4516 1 0 0
chr1:11942370|11942560 hsa-miR-4533 1 0 0
chr1:11942370|11942560 hsa-miR-1587 1 0 0
chr1:11942370|11942560 hsa-miR-4654 1 0 0
chr1:11942370|11942560 hsa-miR-4656 1 0 0
chr1:11942370|11942560 hsa-miR-4689 1 0 0
chr1:11942370|11942560 hsa-miR-4721 1 0 0
chr1:11942370|11942560 hsa-miR-4739 1 0 0
chr1:11942370|11942560 hsa-miR-4741 1 0 0
chr1:11942370|11942560 hsa-miR-5093 1 0 0
chr1:11942370|11942560 hsa-miR-6081 1 0 0
chr1:11942370|11942560 hsa-miR-6127 1 0 0
chr1:11942370|11942560 hsa-miR-6133 1 0 0
chr1:11942370|11942560 hsa-miR-7150 1 0 0
chr1:11942370|11942560 hsa-miR-8073 1 0 0
chr1:11942370|11942560 hsa-miR-8085 1 0 0
chr1:11942370|11942560 hsa-miR-8089 1 0 0
chr1:11942370|11942560 hsa-miR-12118 1 0 0
chr1:11942370|11942560 hsa-miR-12120 1 0 0
chr1:11942370|11942560 hsa-miR-4433b-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6840-3p 1 0 0
chr1:11942370|11942560 hsa-miR-504-3p 1 0 0
chr1:11942370|11942560 hsa-miR-4433a-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6765-5p 1 0 0
chr1:11942370|11942560 hsa-miR-7106-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6825-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6894-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6799-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6510-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6728-5p 1 0 0
chr1:11942370|11942560 hsa-miR-8071 1 0 0
chr1:11942370|11942560 hsa-miR-1236-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6089 1 0 0
chr1:11942370|11942560 hsa-miR-6880-5p 1 0 0
chr1:11942370|11942560 hsa-miR-7847-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6746-5p 1 0 0
chr1:11942370|11942560 hsa-miR-197-5p 1 0 0
chr1:11942370|11942560 hsa-miR-874-3p 1 0 0
chr1:11942370|11942560 hsa-miR-7108-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6772-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6732-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6805-5p 1 0 0
chr1:11942370|11942560 hsa-miR-23a-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6798-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6760-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6881-5p 1 0 0
chr1:11942370|11942560 hsa-miR-2467-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6782-5p 1 0 0
chr1:11942370|11942560 hsa-miR-5008-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6835-5p 1 0 0
chr1:11942370|11942560 hsa-miR-5088-5p 1 0 0
chr1:11942370|11942560 hsa-miR-4640-5p 1 0 0
chr1:11942370|11942560 hsa-miR-4650-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6771-5p 1 0 0
chr1:11942370|11942560 hsa-miR-4690-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6749-5p 1 0 0
chr1:11942370|11942560 hsa-miR-7854-3p 1 0 0
chr1:11942370|11942560 hsa-miR-149-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6824-5p 1 0 0
chr1:11942370|11942560 hsa-miR-3162-5p 1 0 0
chr1:11942370|11942560 hsa-miR-3158-3p 1 0 0
chr1:11942370|11942560 hsa-miR-10400-5p 1 0 0
chr1:11942370|11942560 hsa-miR-1207-5p 1 0 0
chr1:11942370|11942560 hsa-miR-4763-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6778-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6787-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6812-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6870-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6737-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6743-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6754-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6803-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6819-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6851-5p 1 0 0
chr1:11942370|11942560 hsa-miR-7107-5p 1 0 0
chr1:11942370|11942560 hsa-miR-11181-3p 1 0 0
chr1:11942370|11942560 hsa-miR-1249-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6722-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6780a-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6797-5p 1 0 0
chr1:11942370|11942560 hsa-miR-7111-5p 1 0 0
chr1:11942370|11942560 hsa-miR-3620-5p 1 0 0
chr1:11942370|11942560 hsa-miR-4728-5p 1 0 0
chr1:11942370|11942560 hsa-miR-5196-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6780b-5p 1 0 0
chr1:11942370|11942560 hsa-miR-10526-3p 1 0 0
chr1:11942370|11942560 hsa-miR-4649-5p 1 0 0
chr1:11942370|11942560 hsa-miR-4725-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6729-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6794-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6795-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6846-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6858-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6883-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6831-5p 1 0 0
chr1:11942370|11942560 hsa-miR-939-5p 1 0 0
chr1:11942370|11942560 hsa-miR-4769-5p 1 0 0
chr1:11942370|11942560 hsa-miR-3198 1 0 0
chr1:11942370|11942560 hsa-miR-6876-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6891-5p 1 0 0
chr1:11942370|11942560 hsa-miR-4716-3p 1 0 0
chr1:11942370|11942560 hsa-miR-6750-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6785-5p 1 0 0
chr1:11942370|11942560 hsa-miR-6791-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:11942370|11942560
ORF Type ORF1
Protein Length 62
Nucleotide Length 186
Protein Sequence MQHTFLPLKRPPVYLLQEALLNLIPCGHSFARAVLVCPVVDVLVQTCSFSLCQARATSLFPW
Nucleotide Sequence CTGCAACACACATTCCTTCCCCTAAAGAGGCCTCCAGTCTACCTCCTCCAGGAAGCCCTCCTTAATCTCATCCCATGTGGTCACTCCTTTGCACGTGCAGTCTTGGTTTGCCCAGTAGTTGACGTATTGGTACAAACCTGCTCCTTCTCCCTCTGCCAGGCCAGGGCCACATCTTTATTTCCTTGG
CircID chr1:11942370|11942560
ORF Type ORF2
Protein Length 34
Nucleotide Length 105
Protein Sequence MWPWPGRGRRSRFVPIRQLLGKPRLHVQRSDHMG
Nucleotide Sequence ATGTGGCCCTGGCCTGGCAGAGGGAGAAGGAGCAGGTTTGTACCAATACGTCAACTACTGGGCAAACCAAGACTGCACGTGCAAAGGAGTGACCACATGGGATGA
CircID chr1:11942370|11942560
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MAEGEGAGLYQYVNYWANQDCTCKGVTTWDEIKEGFLEEVDWRPL
Nucleotide Sequence CTGGCAGAGGGAGAAGGAGCAGGTTTGTACCAATACGTCAACTACTGGGCAAACCAAGACTGCACGTGCAAAGGAGTGACCACATGGGATGAGATTAAGGAGGGCTTCCTGGAGGAGGTAGACTGGAGGCCTCTTTAG
CircID chr1:11942370|11942560
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MAWQREKEQVCTNTSTTGQTKTARAKE
Nucleotide Sequence CTGGCCTGGCAGAGGGAGAAGGAGCAGGTTTGTACCAATACGTCAACTACTGGGCAAACCAAGACTGCACGTGCAAAGGAGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab