CircNet

General Information

circRNA Basic Information

CircID	chr1:119948414\|119949126
Strand	-
CircType	exon
Host Gene	ENSG00000134250.18;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCAAGAATTGTCAGACAGTATTGGCTCCCTGTTCCCCAAACCCTTGTGAGAATGCTGCTGTTTGCAAAGAGTCACCAAATTTTGAGAGTTATACTTGCTTGTGTGCTCCTGGCTGGCAAGGTCAGCGGTGTACCATTGACATTGACGAGTGTATCTCCAAGCCCTGCATGAACCATGGTCTCTGCCATAACACCCAGGGCAGCTACATGTGTGAATGTCCACCAGGCTTCAGTGGTATGGACTGTGAGGAGGACATTGATGACTGCCTTGCCA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:119948414\|119949126	hsa-miR-1294	1	1	1
chr1:119948414\|119949126	hsa-miR-149-5p	1	1	1
chr1:119948414\|119949126	hsa-miR-6894-5p	1	1	1
chr1:119948414\|119949126	hsa-miR-766-5p	1	1	1
chr1:119948414\|119949126	hsa-miR-221-3p	1	1	1
chr1:119948414\|119949126	hsa-miR-6753-5p	1	1	1
chr1:119948414\|119949126	hsa-miR-7106-3p	1	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:119948414\|119949126
ORF Type	ORF1
Protein Length	40
Nucleotide Length	120
Protein Sequence	MLLFAKSHQILRVILACVLLAGKVSGVPLTLTSVSPSPA*
Nucleotide Sequence	ATGCTGCTGTTTGCAAAGAGTCACCAAATTTTGAGAGTTATACTTGCTTGTGTGCTCCTGGCTGGCAAGGTCAGCGGTGTACCATTGACATTGACGAGTGTATCTCCAAGCCCTGCATGA

CircID	chr1:119948414\|119949126
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MAETMVHAGLGDTLVNVNGTPLTLPARSTQASITLKIW*
Nucleotide Sequence	ATGGCAGAGACCATGGTTCATGCAGGGCTTGGAGATACACTCGTCAATGTCAATGGTACACCGCTGACCTTGCCAGCCAGGAGCACACAAGCAAGTATAACTCTCAAAATTTGGTGA

CircID	chr1:119948414\|119949126
ORF Type	ORF3
Protein Length	35
Nucleotide Length	105
Protein Sequence	MNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLA
Nucleotide Sequence	ATGAACCATGGTCTCTGCCATAACACCCAGGGCAGCTACATGTGTGAATGTCCACCAGGCTTCAGTGGTATGGACTGTGAGGAGGACATTGATGACTGCCTTGCC

CircID	chr1:119948414\|119949126
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MVSAITPRAATCVNVHQASVVWTVRRTLMTALP
Nucleotide Sequence	ATGGTCTCTGCCATAACACCCAGGGCAGCTACATGTGTGAATGTCCACCAGGCTTCAGTGGTATGGACTGTGAGGAGGACATTGATGACTGCCTTGCCA

CircID	chr1:119948414\|119949126
ORF Type	ORF5
Protein Length	74
Nucleotide Length	222
Protein Sequence	VDIHTCSCPGCYGRDHGSCRAWRYTRQCQWYTADLASQEHTSKYNSQNLVTLCKQQHSHKGLGNREPILSDNSC
Nucleotide Sequence	GTGGACATTCACACATGTAGCTGCCCTGGGTGTTATGGCAGAGACCATGGTTCATGCAGGGCTTGGAGATACACTCGTCAATGTCAATGGTACACCGCTGACCTTGCCAGCCAGGAGCACACAAGCAAGTATAACTCTCAAAATTTGGTGACTCTTTGCAAACAGCAGCATTCTCACAAGGGTTTGGGGAACAGGGAGCCAATACTGTCTGACAATTCTTGC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:119948414\|119949126	ELAVL1	3	1	1
chr1:119948414\|119949126	SF3B1	2	0	0
chr1:119948414\|119949126	CELF2	1	0	0
chr1:119948414\|119949126	PRPF8	0	2	0
chr1:119948414\|119949126	FUS	0	1	0
chr1:119948414\|119949126	DGCR8	0	1	1
chr1:119948414\|119949126	NOP58	2	1	1
chr1:119948414\|119949126	SRSF3	0	1	0
chr1:119948414\|119949126	U2AF1	2	0	0
chr1:119948414\|119949126	U2AF2	15	5	1
chr1:119948414\|119949126	DDX54	1	0	3
chr1:119948414\|119949126	RBM10	0	1	0
chr1:119948414\|119949126	PCBP2	0	0	1
chr1:119948414\|119949126	FTO	1	0	0
chr1:119948414\|119949126	PTBP1	0	0	1
chr1:119948414\|119949126	HNRNPC	1	3	0
chr1:119948414\|119949126	HNRNPM	0	2	0
chr1:119948414\|119949126	ACIN1	0	1	1
chr1:119948414\|119949126	XRN2	1	0	0
chr1:119948414\|119949126	HNRNPA1	1	2	0
chr1:119948414\|119949126	LIN28B	0	1	3
chr1:119948414\|119949126	GTF2F1	1	0	0
chr1:119948414\|119949126	IGF2BP2	1	0	1
chr1:119948414\|119949126	HNRNPUL1	0	0	1
chr1:119948414\|119949126	TARDBP	3	1	0
chr1:119948414\|119949126	BUD13	0	1	2
chr1:119948414\|119949126	RBM47	0	0	2
chr1:119948414\|119949126	DDX24	1	0	0
chr1:119948414\|119949126	CSTF2T	0	0	1
chr1:119948414\|119949126	TIA1	1	0	0
chr1:119948414\|119949126	TIAL1	2	0	0
chr1:119948414\|119949126	FBL	2	2	1
chr1:119948414\|119949126	EIF4A3	2	2	4
chr1:119948414\|119949126	AGO2	0	0	1

CircRNA Information