CircRNA Information

General Information
circRNA Basic Information
CircID chr1:12012285|12012452
Strand +
CircType exon
Host Gene ENSG00000116688.15;
Algorism CIRI2;
Sequence CTCAGCCAGCCACCAACGTCCCCACCTTCCACCATCCATCCTTCTACTACATCCTTCAACCACCTAGACCATGCCATCTTCCAAAACAGATCTACACAAAACAGGCCTGCACAAGTCCAGGACTGACACTAAAGCAAAGGACACAATAATGAGAAGAGAGGCAAGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:12012285|12012452 hsa-miR-223-5p 0 0 1
chr1:12012285|12012452 hsa-miR-223-3p 0 0 1
chr1:12012285|12012452 hsa-miR-422a 0 0 1
chr1:12012285|12012452 hsa-miR-563 0 0 1
chr1:12012285|12012452 hsa-miR-592 0 0 1
chr1:12012285|12012452 hsa-miR-599 0 0 1
chr1:12012285|12012452 hsa-miR-601 1 1 1
chr1:12012285|12012452 hsa-miR-411-5p 0 0 1
chr1:12012285|12012452 hsa-miR-411-3p 0 0 1
chr1:12012285|12012452 hsa-miR-942-5p 0 0 1
chr1:12012285|12012452 hsa-miR-942-3p 0 0 1
chr1:12012285|12012452 hsa-miR-1236-5p 0 0 1
chr1:12012285|12012452 hsa-miR-1236-3p 0 0 1
chr1:12012285|12012452 hsa-miR-1265 0 0 1
chr1:12012285|12012452 hsa-miR-1252-5p 0 0 1
chr1:12012285|12012452 hsa-miR-1252-3p 0 0 1
chr1:12012285|12012452 hsa-miR-491-5p 1 0 1
chr1:12012285|12012452 hsa-miR-876-3p 0 0 1
chr1:12012285|12012452 hsa-miR-455-3p 0 0 1
chr1:12012285|12012452 hsa-miR-7 0 0 1
chr1:12012285|12012452 hsa-miR-378 0 0 1
chr1:12012285|12012452 hsa-miR-608 1 0 0
chr1:12012285|12012452 hsa-miR-637 1 0 0
chr1:12012285|12012452 hsa-miR-658 1 0 0
chr1:12012285|12012452 hsa-miR-1293 1 0 0
chr1:12012285|12012452 hsa-miR-1262 1 0 0
chr1:12012285|12012452 hsa-miR-1268a 1 0 0
chr1:12012285|12012452 hsa-miR-1275 1 0 0
chr1:12012285|12012452 hsa-miR-1321 1 0 0
chr1:12012285|12012452 hsa-miR-2110 1 0 0
chr1:12012285|12012452 hsa-miR-378b 0 1 0
chr1:12012285|12012452 hsa-miR-3141 1 0 0
chr1:12012285|12012452 hsa-miR-3154 1 0 0
chr1:12012285|12012452 hsa-miR-1193 1 1 0
chr1:12012285|12012452 hsa-miR-3185 1 0 0
chr1:12012285|12012452 hsa-miR-378c 0 1 0
chr1:12012285|12012452 hsa-miR-3652 1 0 0
chr1:12012285|12012452 hsa-miR-3911 1 0 0
chr1:12012285|12012452 hsa-miR-1268b 1 0 0
chr1:12012285|12012452 hsa-miR-378e 0 1 0
chr1:12012285|12012452 hsa-miR-378f 0 1 0
chr1:12012285|12012452 hsa-miR-4447 1 0 0
chr1:12012285|12012452 hsa-miR-4450 1 0 0
chr1:12012285|12012452 hsa-miR-378h 0 1 0
chr1:12012285|12012452 hsa-miR-4466 1 0 0
chr1:12012285|12012452 hsa-miR-4476 1 0 0
chr1:12012285|12012452 hsa-miR-3689c 1 0 0
chr1:12012285|12012452 hsa-miR-4488 1 0 0
chr1:12012285|12012452 hsa-miR-4506 1 0 0
chr1:12012285|12012452 hsa-miR-2392 1 1 0
chr1:12012285|12012452 hsa-miR-4525 1 0 0
chr1:12012285|12012452 hsa-miR-4533 1 0 0
chr1:12012285|12012452 hsa-miR-4534 1 0 0
chr1:12012285|12012452 hsa-miR-1587 1 0 0
chr1:12012285|12012452 hsa-miR-4642 1 0 0
chr1:12012285|12012452 hsa-miR-4647 0 1 0
chr1:12012285|12012452 hsa-miR-4739 1 0 0
chr1:12012285|12012452 hsa-miR-5192 1 0 0
chr1:12012285|12012452 hsa-miR-5698 1 0 0
chr1:12012285|12012452 hsa-miR-5787 1 0 0
chr1:12012285|12012452 hsa-miR-6079 1 0 0
chr1:12012285|12012452 hsa-miR-6086 1 0 0
chr1:12012285|12012452 hsa-miR-6133 1 0 0
chr1:12012285|12012452 hsa-miR-6134 1 0 0
chr1:12012285|12012452 hsa-miR-6745 1 0 0
chr1:12012285|12012452 hsa-miR-8078 0 1 0
chr1:12012285|12012452 hsa-miR-8089 1 0 0
chr1:12012285|12012452 hsa-miR-12114 1 0 0
chr1:12012285|12012452 hsa-miR-12118 1 0 0
chr1:12012285|12012452 hsa-miR-135a-3p 1 0 0
chr1:12012285|12012452 hsa-miR-105-3p 1 0 0
chr1:12012285|12012452 hsa-miR-511-5p 0 1 0
chr1:12012285|12012452 hsa-miR-92a-1-5p 1 0 0
chr1:12012285|12012452 hsa-miR-92a-2-5p 1 1 0
chr1:12012285|12012452 hsa-miR-128-1-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3150a-3p 1 0 0
chr1:12012285|12012452 hsa-miR-7106-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6825-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6894-5p 1 1 0
chr1:12012285|12012452 hsa-miR-6857-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6799-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6728-5p 1 0 0
chr1:12012285|12012452 hsa-miR-8071 1 0 0
chr1:12012285|12012452 hsa-miR-6804-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6833-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6515-5p 1 1 0
chr1:12012285|12012452 hsa-miR-3192-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6757-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6880-5p 1 0 0
chr1:12012285|12012452 hsa-miR-7847-3p 1 0 0
chr1:12012285|12012452 hsa-miR-6730-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6741-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3622b-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6806-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6759-5p 1 0 0
chr1:12012285|12012452 hsa-miR-8069 1 0 0
chr1:12012285|12012452 hsa-miR-6776-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6742-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3605-5p 1 1 0
chr1:12012285|12012452 hsa-miR-3151-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6748-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6772-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3190-3p 1 1 0
chr1:12012285|12012452 hsa-miR-6805-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6782-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3156-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6821-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6810-5p 1 0 0
chr1:12012285|12012452 hsa-miR-30b-3p 1 0 0
chr1:12012285|12012452 hsa-miR-6786-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3691-5p 1 0 0
chr1:12012285|12012452 hsa-miR-4764-5p 1 0 0
chr1:12012285|12012452 hsa-miR-1908-5p 1 0 0
chr1:12012285|12012452 hsa-miR-296-3p 1 0 0
chr1:12012285|12012452 hsa-let-7b-5p 1 0 0
chr1:12012285|12012452 hsa-miR-92b-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6749-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6834-5p 1 0 0
chr1:12012285|12012452 hsa-miR-149-3p 1 0 0
chr1:12012285|12012452 hsa-miR-6717-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6789-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6802-5p 1 1 0
chr1:12012285|12012452 hsa-miR-5010-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3191-3p 1 1 0
chr1:12012285|12012452 hsa-miR-1225-5p 1 0 0
chr1:12012285|12012452 hsa-let-7c-5p 1 0 0
chr1:12012285|12012452 hsa-miR-4652-5p 1 0 0
chr1:12012285|12012452 hsa-miR-4727-3p 1 0 0
chr1:12012285|12012452 hsa-miR-1910-5p 0 1 0
chr1:12012285|12012452 hsa-miR-335-3p 0 1 0
chr1:12012285|12012452 hsa-miR-6838-3p 0 1 0
chr1:12012285|12012452 hsa-miR-3152-5p 0 1 0
chr1:12012285|12012452 hsa-miR-1233-5p 1 0 0
chr1:12012285|12012452 hsa-miR-1273h-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3689b-3p 1 0 0
chr1:12012285|12012452 hsa-miR-6769b-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6778-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6865-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6726-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6737-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6756-5p 1 1 0
chr1:12012285|12012452 hsa-miR-6769a-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6815-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6851-5p 1 0 0
chr1:12012285|12012452 hsa-miR-1249-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6763-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6779-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6780a-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6788-5p 1 0 0
chr1:12012285|12012452 hsa-miR-7111-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3620-5p 1 0 0
chr1:12012285|12012452 hsa-miR-4728-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6780b-5p 1 0 0
chr1:12012285|12012452 hsa-miR-1237-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3689a-3p 1 0 0
chr1:12012285|12012452 hsa-miR-4701-3p 1 0 0
chr1:12012285|12012452 hsa-miR-4725-3p 1 0 0
chr1:12012285|12012452 hsa-miR-4745-5p 1 0 0
chr1:12012285|12012452 hsa-miR-4749-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6795-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6883-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6887-5p 1 0 0
chr1:12012285|12012452 hsa-miR-4697-5p 1 0 0
chr1:12012285|12012452 hsa-miR-4769-5p 1 0 0
chr1:12012285|12012452 hsa-miR-365a-5p 1 0 0
chr1:12012285|12012452 hsa-miR-365b-5p 1 0 0
chr1:12012285|12012452 hsa-miR-3679-5p 1 0 0
chr1:12012285|12012452 hsa-miR-4747-5p 1 0 0
chr1:12012285|12012452 hsa-miR-6891-5p 1 0 0
chr1:12012285|12012452 hsa-miR-378a-3p 0 1 0
chr1:12012285|12012452 hsa-miR-4472 1 0 0
chr1:12012285|12012452 hsa-miR-541-3p 1 0 0
chr1:12012285|12012452 hsa-miR-6766-5p 1 0 0
chr1:12012285|12012452 hsa-miR-5009-5p 0 1 0
chr1:12012285|12012452 hsa-miR-6744-3p 0 1 0
chr1:12012285|12012452 hsa-miR-6811-5p 1 1 0
chr1:12012285|12012452 hsa-miR-378d 0 1 0
chr1:12012285|12012452 hsa-miR-130a-5p 0 1 0
chr1:12012285|12012452 hsa-miR-122b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:12012285|12012452
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MPSSKTDLHKTGLHKSRTDTKAKDTIMRREAS
Nucleotide Sequence ATGCCATCTTCCAAAACAGATCTACACAAAACAGGCCTGCACAAGTCCAGGACTGACACTAAAGCAAAGGACACAATAATGAGAAGAGAGGCAAGT
CircID chr1:12012285|12012452
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MFCVDLFWKMAWSRWLKDVVEGWMVEGGDVGGWL
Nucleotide Sequence CTGTTTTGTGTAGATCTGTTTTGGAAGATGGCATGGTCTAGGTGGTTGAAGGATGTAGTAGAAGGATGGATGGTGGAAGGTGGGGACGTTGGTGGCTGGCTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab