CircRNA Information

General Information
circRNA Basic Information
CircID chr1:1205370|1205487
Strand -
CircType exon
Host Gene ENSG00000186891.12;
Algorism CIRI2;
Sequence CCTGGGACTGTACCCCCTGGCCTGGGGGACAAGGGTGGTGCCGGCAGGTCGTGCAGCAAGGGTCTCCGCAGTGGAATTCAGGCTGGACACACATGCAGTCCCACTCGGAACAGCACTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:1205370|1205487 hsa-miR-198 0 0 1
chr1:1205370|1205487 hsa-miR-217-5p 0 0 1
chr1:1205370|1205487 hsa-miR-217-3p 0 0 1
chr1:1205370|1205487 hsa-miR-658 0 0 1
chr1:1205370|1205487 hsa-miR-1288-5p 0 0 1
chr1:1205370|1205487 hsa-miR-1288-3p 0 0 1
chr1:1205370|1205487 hsa-miR-512-3p 0 0 1
chr1:1205370|1205487 hsa-miR-361-3p 0 0 1
chr1:1205370|1205487 hsa-miR-220b 0 0 1
chr1:1205370|1205487 hsa-miR-4634 1 0 0
chr1:1205370|1205487 hsa-miR-4648 0 1 0
chr1:1205370|1205487 hsa-miR-4706 1 0 0
chr1:1205370|1205487 hsa-miR-4666b 0 1 0
chr1:1205370|1205487 hsa-miR-10226 0 1 0
chr1:1205370|1205487 hsa-miR-1972 0 1 0
chr1:1205370|1205487 hsa-miR-593-5p 0 1 0
chr1:1205370|1205487 hsa-miR-6840-5p 0 1 0
chr1:1205370|1205487 hsa-miR-181a-2-3p 1 0 0
chr1:1205370|1205487 hsa-miR-6849-3p 0 1 0
chr1:1205370|1205487 hsa-miR-1915-5p 1 0 0
chr1:1205370|1205487 hsa-miR-6732-5p 0 1 0
chr1:1205370|1205487 hsa-miR-5008-5p 0 1 0
chr1:1205370|1205487 hsa-miR-6850-5p 1 0 0
chr1:1205370|1205487 hsa-miR-194-3p 0 1 0
chr1:1205370|1205487 hsa-miR-6837-3p 1 0 0
chr1:1205370|1205487 hsa-miR-1227-3p 0 1 0
chr1:1205370|1205487 hsa-miR-6780b-3p 0 1 0
chr1:1205370|1205487 hsa-miR-6752-5p 0 1 0
chr1:1205370|1205487 hsa-miR-6756-5p 0 1 0
chr1:1205370|1205487 hsa-miR-4745-5p 0 1 0
chr1:1205370|1205487 hsa-miR-4749-5p 1 0 0
chr1:1205370|1205487 hsa-miR-1238-5p 0 1 0
chr1:1205370|1205487 hsa-miR-324-3p 1 1 0
chr1:1205370|1205487 hsa-miR-4722-3p 0 1 0
chr1:1205370|1205487 hsa-miR-6810-3p 1 0 0
chr1:1205370|1205487 hsa-miR-4691-5p 0 1 0
chr1:1205370|1205487 hsa-miR-1234-3p 1 0 0
chr1:1205370|1205487 hsa-miR-6807-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:1205370|1205487
ORF Type ORF1
Protein Length 32
Nucleotide Length 96
Protein Sequence MGDKGGAGRSCSKGLRSGIQAGHTCSPTRNST
Nucleotide Sequence CTGGGGGACAAGGGTGGTGCCGGCAGGTCGTGCAGCAAGGGTCTCCGCAGTGGAATTCAGGCTGGACACACATGCAGTCCCACTCGGAACAGCACT

CircID chr1:1205370|1205487
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence LGLYPLAWGTRVVPAGRAARVSAVEFRLDTHAVPLGTAL
Nucleotide Sequence CTGGGACTGTACCCCCTGGCCTGGGGGACAAGGGTGGTGCCGGCAGGTCGTGCAGCAAGGGTCTCCGCAGTGGAATTCAGGCTGGACACACATGCAGTCCCACTCGGAACAGCACTC

CircID chr1:1205370|1205487
ORF Type ORF3
Protein Length 31
Nucleotide Length 93
Protein Sequence MCVQPEFHCGDPCCTTCRHHPCPPGQGVQSQ
Nucleotide Sequence ATGTGTGTCCAGCCTGAATTCCACTGCGGAGACCCTTGCTGCACGACCTGCCGGCACCACCCTTGTCCCCCAGGCCAGGGGGTACAGTCCCAG

CircID chr1:1205370|1205487
ORF Type ORF4
Protein Length 27
Nucleotide Length 81
Protein Sequence MNSTAETLAARPAGTTLVPQARGYSPR
Nucleotide Sequence CTGAATTCCACTGCGGAGACCCTTGCTGCACGACCTGCCGGCACCACCCTTGTCCCCCAGGCCAGGGGGTACAGTCCCAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites