CircNet

General Information

circRNA Basic Information

CircID	chr1:12208343\|12208525
Strand	-
CircType	exon
Host Gene	ENSG00000028137.15;
Algorism	CIRI2;
Sequence	CTTCAATTCCTGGGCCCCAAACGGGCTGCCCTGCCACTTTGGTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCGTGTCGTGGGTGTGTGTAGCCAAGGTCGGTAAGTTGAATGGCCTGCCTTGAAGCCACTGAAGCTGGGATTCCTCCCCATTAGAGTCAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:12208343\|12208525	hsa-miR-345-5p	0	0	1
chr1:12208343\|12208525	hsa-miR-345-3p	0	0	1
chr1:12208343\|12208525	hsa-miR-193b-5p	0	0	1
chr1:12208343\|12208525	hsa-miR-193b-3p	0	0	1
chr1:12208343\|12208525	hsa-miR-520g-5p	0	0	1
chr1:12208343\|12208525	hsa-miR-520g-3p	0	0	1
chr1:12208343\|12208525	hsa-miR-520h	0	0	1
chr1:12208343\|12208525	hsa-miR-603	0	0	1
chr1:12208343\|12208525	hsa-miR-638	1	0	1
chr1:12208343\|12208525	hsa-miR-939-5p	0	0	1
chr1:12208343\|12208525	hsa-miR-939-3p	0	0	1
chr1:12208343\|12208525	hsa-miR-940	0	1	1
chr1:12208343\|12208525	hsa-miR-1207-5p	1	1	1
chr1:12208343\|12208525	hsa-miR-769-3p	0	1	1
chr1:12208343\|12208525	hsa-miR-450b-3p	0	1	1
chr1:12208343\|12208525	hsa-miR-193a-3p	0	1	1
chr1:12208343\|12208525	hsa-miR-362-3p	0	0	1
chr1:12208343\|12208525	hsa-miR-329	0	0	1
chr1:12208343\|12208525	hsa-miR-647	0	1	0
chr1:12208343\|12208525	hsa-miR-663a	1	0	0
chr1:12208343\|12208525	hsa-miR-466	1	1	0
chr1:12208343\|12208525	hsa-miR-3166	0	1	0
chr1:12208343\|12208525	hsa-miR-3197	1	0	0
chr1:12208343\|12208525	hsa-miR-4260	0	1	0
chr1:12208343\|12208525	hsa-miR-3941	0	1	0
chr1:12208343\|12208525	hsa-miR-4706	1	0	0
chr1:12208343\|12208525	hsa-miR-4739	1	0	0
chr1:12208343\|12208525	hsa-miR-4741	1	0	0
chr1:12208343\|12208525	hsa-miR-5683	0	1	0
chr1:12208343\|12208525	hsa-miR-6081	1	0	0
chr1:12208343\|12208525	hsa-miR-8485	1	1	0
chr1:12208343\|12208525	hsa-miR-125b-2-3p	1	1	0
chr1:12208343\|12208525	hsa-miR-15a-3p	0	1	0
chr1:12208343\|12208525	hsa-miR-671-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-212-5p	0	1	0
chr1:12208343\|12208525	hsa-miR-3150a-3p	1	1	0
chr1:12208343\|12208525	hsa-miR-6861-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-6825-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-6894-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-6857-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-6742-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-3180-3p	1	0	0
chr1:12208343\|12208525	hsa-miR-6757-3p	0	1	0
chr1:12208343\|12208525	hsa-miR-3614-5p	0	1	0
chr1:12208343\|12208525	hsa-miR-6813-3p	0	1	0
chr1:12208343\|12208525	hsa-miR-6513-5p	0	1	0
chr1:12208343\|12208525	hsa-miR-6767-5p	1	1	0
chr1:12208343\|12208525	hsa-miR-4796-3p	0	1	0
chr1:12208343\|12208525	hsa-miR-4763-3p	1	1	0
chr1:12208343\|12208525	hsa-miR-1343-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-6743-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-6754-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-6780a-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-7111-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-328-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-4632-5p	1	1	0
chr1:12208343\|12208525	hsa-miR-6735-5p	1	1	0
chr1:12208343\|12208525	hsa-miR-6715b-5p	1	0	0
chr1:12208343\|12208525	hsa-miR-195-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:12208343\|12208525
ORF Type	ORF1
Protein Length	38
Nucleotide Length	117
Protein Sequence	MGPKRAALPLWYMASVIPSASLVSASVLRVVGVCSQGR
Nucleotide Sequence	CTGGGCCCCAAACGGGCTGCCCTGCCACTTTGGTACATGGCCAGTGTGATCCCAAGTGCCAGTCTTGTGTCTGCGTCTGTGTTGCGTGTCGTGGGTGTGTGTAGCCAAGGTCGGTAA

CircID	chr1:12208343\|12208525
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MATHTHDTQHRRRHKTGTWDHTGHVPKWQGSPFGAQELK
Nucleotide Sequence	TTGGCTACACACACCCACGACACGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACCAAAGTGGCAGGGCAGCCCGTTTGGGGCCCAGGAATTGAAG

CircID	chr1:12208343\|12208525
ORF Type	ORF3
Protein Length	59
Nucleotide Length	180
Protein Sequence	LTLMGRNPSFSGFKAGHSTYRPWLHTPTTRNTDADTRLALGITLAMYQSGRAARLGPRN
Nucleotide Sequence	CTGACTCTAATGGGGAGGAATCCCAGCTTCAGTGGCTTCAAGGCAGGCCATTCAACTTACCGACCTTGGCTACACACACCCACGACACGCAACACAGACGCAGACACAAGACTGGCACTTGGGATCACACTGGCCATGTACCAAAGTGGCAGGGCAGCCCGTTTGGGGCCCAGGAATTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information