CircNet

General Information

circRNA Basic Information

CircID	chr1:12308431\|12311925
Strand	+
CircType	exon
Host Gene	ENSG00000048707.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	AAGACCATGTCTGCCTGCTGGATTGCGTTGTCGTGGATCTCCAGGACATGGACATCTTTGCTGCAGAGAGACATCCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGAGATCTGATCTTCCCTTCCTATTTTGTGCGACAGACAGGAGGAAGCCTCTTAACCGAGCCTTGTAGGCTGAAATTGCAGGTGGAAAGGAATTTGGACAAAGAAATAAGTCATACTGTGCCAGACATATCTATCCATGGCAATCTCTCCTCAGTCCACTGCTCTCTGGATCTGTATAAATACAAGCTGATCCGCGGCTTATTAGAGAACAACCTGGGAGAACCCATAGAGGAATTTATGCGGCCTTATGATTTACAAGATCCAAGAATTCATACTGTCCTGAGTGGAGAAGTGTACACCTGTATGTGCTTCCTCATTGATATGGTGAATGTAAGTCTGGAGCTTAAAGATCCAAAAAGAAAAGAAGGTGCTGGGTCCCTAGCCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:12308431\|12311925
ORF Type	ORF1
Protein Length	149
Nucleotide Length	447
Protein Sequence	MDIFAAERHPREYSKAPEDSSGDLIFPSYFVRQTGGSLLTEPCRLKLQVERNLDKEISHTVPDISIHGNLSSVHCSLDLYKYKLIRGLLENNLGEPIEEFMRPYDLQDPRIHTVLSGEVYTCMCFLIDMVNVSLELKDPKRKEGAGSLA
Nucleotide Sequence	ATGGACATCTTTGCTGCAGAGAGACATCCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGAGATCTGATCTTCCCTTCCTATTTTGTGCGACAGACAGGAGGAAGCCTCTTAACCGAGCCTTGTAGGCTGAAATTGCAGGTGGAAAGGAATTTGGACAAAGAAATAAGTCATACTGTGCCAGACATATCTATCCATGGCAATCTCTCCTCAGTCCACTGCTCTCTGGATCTGTATAAATACAAGCTGATCCGCGGCTTATTAGAGAACAACCTGGGAGAACCCATAGAGGAATTTATGCGGCCTTATGATTTACAAGATCCAAGAATTCATACTGTCCTGAGTGGAGAAGTGTACACCTGTATGTGCTTCCTCATTGATATGGTGAATGTAAGTCTGGAGCTTAAAGATCCAAAAAGAAAAGAAGGTGCTGGGTCCCTAGCC

CircID	chr1:12308431\|12311925
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MGSPRLFSNKPRISLYLYRSREQWTEERLPWIDMSGTV*
Nucleotide Sequence	ATGGGTTCTCCCAGGTTGTTCTCTAATAAGCCGCGGATCAGCTTGTATTTATACAGATCCAGAGAGCAGTGGACTGAGGAGAGATTGCCATGGATAGATATGTCTGGCACAGTATGA

CircID	chr1:12308431\|12311925
ORF Type	ORF3
Protein Length	38
Nucleotide Length	114
Protein Sequence	MSACWIALSWISRTWTSLLQRDIRENTRRHQRIVVEI*
Nucleotide Sequence	ATGTCTGCCTGCTGGATTGCGTTGTCGTGGATCTCCAGGACATGGACATCTTTGCTGCAGAGAGACATCCGAGAGAATACTCGAAGGCACCAGAGGATAGTAGTGGAGATCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:12308431\|12311925	MOV10	0	0	1
chr1:12308431\|12311925	ELAVL1	1	2	0
chr1:12308431\|12311925	SF3B1	1	0	0
chr1:12308431\|12311925	FMR1	1	0	5
chr1:12308431\|12311925	NUDT21	1	0	0
chr1:12308431\|12311925	FUS	0	3	0
chr1:12308431\|12311925	DGCR8	0	2	0
chr1:12308431\|12311925	SRSF1	0	0	2
chr1:12308431\|12311925	NOP58	0	1	3
chr1:12308431\|12311925	SUB1	0	0	1
chr1:12308431\|12311925	U2AF1	0	1	0
chr1:12308431\|12311925	U2AF2	9	1	0
chr1:12308431\|12311925	DDX54	0	0	7
chr1:12308431\|12311925	RBM10	0	1	0
chr1:12308431\|12311925	HNRNPM	1	2	0
chr1:12308431\|12311925	SF3A3	1	0	0
chr1:12308431\|12311925	PTBP1	0	1	1
chr1:12308431\|12311925	HNRNPC	4	2	0
chr1:12308431\|12311925	HNRNPA2B1	0	1	0
chr1:12308431\|12311925	HNRNPA1	0	2	0
chr1:12308431\|12311925	LIN28B	0	1	0
chr1:12308431\|12311925	FXR1	0	0	2
chr1:12308431\|12311925	FXR2	0	0	3
chr1:12308431\|12311925	SND1	0	0	1
chr1:12308431\|12311925	IGF2BP2	0	0	5
chr1:12308431\|12311925	TARDBP	1	5	0
chr1:12308431\|12311925	DICER1	0	0	1
chr1:12308431\|12311925	RBFOX2	0	0	1
chr1:12308431\|12311925	DDX24	2	0	1
chr1:12308431\|12311925	EIF4G2	0	1	0
chr1:12308431\|12311925	CSTF2T	0	0	1
chr1:12308431\|12311925	YBX3	1	0	1
chr1:12308431\|12311925	DKC1	1	0	0
chr1:12308431\|12311925	FBL	1	0	0
chr1:12308431\|12311925	EIF4A3	4	2	6
chr1:12308431\|12311925	AGO2	0	0	2

CircRNA Information