CircNet

General Information

circRNA Basic Information

CircID	chr1:1233839\|1233983
Strand	+
CircType	exon
Host Gene	ENSG00000176022.4;
Algorism	CIRI2;
Sequence	CTGGGGCAGAGTCTGAAATAAAGCAGCACCGGCCCTGTGTGGCGCGGACCCATGGGAAGCCTTGAAAGGAAAGTCTCTTCAGAAAGAAACAATGGGTTCAGTGACTTGTACACTGAAAAGATAGATGGCCAGTTTTAAAGTTCTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:1233839\|1233983	hsa-miR-224-5p	0	0	1
chr1:1233839\|1233983	hsa-miR-224-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-146a-5p	0	0	1
chr1:1233839\|1233983	hsa-miR-146a-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-193b-5p	0	0	1
chr1:1233839\|1233983	hsa-miR-193b-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-498-5p	0	0	1
chr1:1233839\|1233983	hsa-miR-498-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-660-5p	0	0	1
chr1:1233839\|1233983	hsa-miR-660-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-937-5p	0	0	1
chr1:1233839\|1233983	hsa-miR-937-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-548e-5p	0	0	1
chr1:1233839\|1233983	hsa-miR-548e-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-1250-5p	0	0	1
chr1:1233839\|1233983	hsa-miR-1250-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-324-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-146b-5p	0	0	1
chr1:1233839\|1233983	hsa-miR-193a-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-548a-3p	0	0	1
chr1:1233839\|1233983	hsa-miR-220c	0	0	1
chr1:1233839\|1233983	hsa-miR-1308	0	0	1
chr1:1233839\|1233983	hsa-miR-548f	0	0	1
chr1:1233839\|1233983	hsa-miR-608	1	0	0
chr1:1233839\|1233983	hsa-miR-648	0	1	0
chr1:1233839\|1233983	hsa-miR-3918	0	1	0
chr1:1233839\|1233983	hsa-miR-4522	0	1	0
chr1:1233839\|1233983	hsa-miR-12119	1	0	0
chr1:1233839\|1233983	hsa-miR-138-5p	1	0	0
chr1:1233839\|1233983	hsa-miR-103a-2-5p	1	0	0
chr1:1233839\|1233983	hsa-miR-6757-3p	1	0	0
chr1:1233839\|1233983	hsa-miR-7161-3p	0	1	0
chr1:1233839\|1233983	hsa-miR-6882-5p	0	1	0
chr1:1233839\|1233983	hsa-let-7g-3p	0	1	0
chr1:1233839\|1233983	hsa-miR-3620-5p	1	0	0
chr1:1233839\|1233983	hsa-miR-103a-1-5p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:1233839\|1233983
ORF Type	ORF1
Protein Length	28
Nucleotide Length	87
Protein Sequence	MGSLERKVSSERNNGFSDLYTEKIDGQF
Nucleotide Sequence	ATGGGAAGCCTTGAAAGGAAAGTCTCTTCAGAAAGAAACAATGGGTTCAGTGACTTGTACACTGAAAAGATAGATGGCCAGTTTTAA

CircID	chr1:1233839\|1233983
ORF Type	ORF2
Protein Length	29
Nucleotide Length	90
Protein Sequence	MCGADPWEALKGKSLQKETMGSVTCTLKR
Nucleotide Sequence	CTGTGTGGCGCGGACCCATGGGAAGCCTTGAAAGGAAAGTCTCTTCAGAAAGAAACAATGGGTTCAGTGACTTGTACACTGAAAAGATAG

CircID	chr1:1233839\|1233983
ORF Type	ORF3
Protein Length	27
Nucleotide Length	81
Protein Sequence	MKRLSFQGFPWVRATQGRCCFISDSAP
Nucleotide Sequence	CTGAAGAGACTTTCCTTTCAAGGCTTCCCATGGGTCCGCGCCACACAGGGCCGGTGCTGCTTTATTTCAGACTCTGCCCCA

CircID	chr1:1233839\|1233983
ORF Type	ORF4
Protein Length	33
Nucleotide Length	99
Protein Sequence	MNPLFLSEETFLSRLPMGPRHTGPVLLYFRLCP
Nucleotide Sequence	CTGAACCCATTGTTTCTTTCTGAAGAGACTTTCCTTTCAAGGCTTCCCATGGGTCCGCGCCACACAGGGCCGGTGCTGCTTTATTTCAGACTCTGCCCC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information