CircNet

General Information

circRNA Basic Information

CircID	chr1:12373750\|12416827
Strand	+
CircType	exon
Host Gene	ENSG00000048707.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	CTTGCAGGAGGGAACAGGCAGGCCTGTGGCTTCCAACAAGGCCATTACCTGTGCGGAGCTCGTTTTGGATGTCTCACCCAAGACACAAAGAGTCATTTTAAAAAAGAAGGAACCAGGAAAGCGTTCTCAGCTGTGGAGGATGACAGGAACAGGAATGCTGGCCCATGAGGGCTCCTCAGTTCCTCACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGCCATCTTAGATATTGCTGGTCTCGCTGCAGTGACTGACAACAGATACGAGCCACTGATGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAGGAAAACTGACCTGTGGGTTACATGGGTTGGTCGTCCAGGCCAAAGGAGGACTTTCTGGTTTGTTTGATGGAGCTGAAGTTGTTCTTGGTCCTGACACTTCCATGGAGCTTTTGGGGCCAGTTCCACCTGAACAACAATTTATTAATCAAAAAATGAGACCTGGTTCTGGAATGTTATCCATCAGAGTCATCCCAGATGGACCAACTAGAGCACTCCAGATAACAGATTTCTGCCACCGGAAAAGCAGCCGTTCATATGAAGTGGATGAACTTCCTGTCACCGAACAAGAGCTGCAGAAATTAAAGAATCCAGATACAGAGCAGGAATTGGAAGTGCTTGTGAGGTTAGAAGGTGGAATTGGGTTGTCCTTAATTAATAAAGTCCCAGAAGAACTGGTCTTTGCAAGTCTTACAGGAATCAATGTGCACTATACACAGCTGGCAACCAGTCACATGCTTGAACTCAGCATACAGGATGTACAGGTGGACAATCAGCTCATTGGTACCACGCAGCCCTTCATGCTCTATGTGACTCCCCTGAGCAATGAGAATGAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGTAAGAGTGCACTGACCAACATCTACAAGCATCTGATGATCACAGCTCAGAGATTCACAGTGCAAATTGAGGAGAAACTGCTCCTCAAGCTGCTAAGTTTCTTTGGCTACGATCAAGCAGAATCAGATTTAGAATTTAAGCTTTAAGAGTATTTGGGATCAAGAGCAAGATCCTGTCTGTTTAATGCTGTGTTTTCCACTTTGGGTTGGAACGCCAGTGTTTATTTGTATTCAGACAGCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATGAAAAGACAGCTGAGCAAGGTGGAACACCAATTCGATACTACTTTGAAAATCTCAAAATCAGCATTCCTCAGATCAAGCTAAGTGTGTTCACCTCCAACAAGCTCCCATTGGATCTTAAGAGTTTTGTTTAGTGCAGGATAAACTAAGAAAGGAAAGGACATGGCCGAGGGAATAGCTTGGGATCTGAGACCTTATGCCAAAACAGCCAGGACTGGAGAGTTCAAGATTTATGAGAGGAGAGAAACTCAGTAAGGCCCTAAAAAGCACCTTGGGGTTTCCTTTGATACGGTTTGAAGACGCTGTGATTAATCTAGATCCATTCACTCGGGTACATCCCTATGAGACCAAGGAGTTCATCATCAATGATATCCTCAAACATTTCCAGGAGGAACTCCTCAGCCAGGCAGCTCGAATCCTGGGATCAGTGGATTTTCTTGGCAATCCTATGGGGCTTTTGAATGATGTTTCTGAAGGGGTTACTGGACTGATAAAATATGGAAATGTCGGGGGCCTCATCAGAAATGTTACACACGGAGTATCAAACTCTGCTGCCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:12373750\|12416827	hsa-miR-637	1	1	1
chr1:12373750\|12416827	hsa-miR-643	1	1	1
chr1:12373750\|12416827	hsa-miR-665	1	1	1
chr1:12373750\|12416827	hsa-miR-1248	1	1	1
chr1:12373750\|12416827	hsa-miR-2110	1	1	1
chr1:12373750\|12416827	hsa-miR-4656	1	1	1
chr1:12373750\|12416827	hsa-miR-4734	1	1	1
chr1:12373750\|12416827	hsa-miR-5100	1	1	1
chr1:12373750\|12416827	hsa-miR-7974	1	1	1
chr1:12373750\|12416827	hsa-miR-8075	1	1	1
chr1:12373750\|12416827	hsa-miR-135a-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-134-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-4433b-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-22-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-4731-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-7155-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-6765-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-671-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-215-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-6857-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-27a-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-6728-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-8071	1	1	1
chr1:12373750\|12416827	hsa-miR-6880-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-7847-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-4653-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-3064-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-145-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-6842-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-6829-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-6827-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-6798-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-4793-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-6786-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-5088-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-1226-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-4763-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-4786-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-885-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-6834-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-6501-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-6809-3p	1	1	1
chr1:12373750\|12416827	hsa-miR-490-5p	1	1	1
chr1:12373750\|12416827	hsa-miR-6838-3p	1	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:12373750\|12416827
ORF Type	ORF1
Protein Length	318
Nucleotide Length	954
Protein Sequence	MTGTGMLAHEGSSVPHNPNKPSAARSTEGSAILDIAGLAAVTDNRYEPLMLRKPDRRRSTTQTWSFREGKLTCGLHGLVVQAKGGLSGLFDGAEVVLGPDTSMELLGPVPPEQQFINQKMRPGSGMLSIRVIPDGPTRALQITDFCHRKSSRSYEVDELPVTEQELQKLKNPDTEQELEVLVRLEGGIGLSLINKVPEELVFASLTGINVHYTQLATSHMLELSIQDVQVDNQLIGTTQPFMLYVTPLSNENEVIETGPAVQVNAVKFPSKSALTNIYKHLMITAQRFTVQIEEKLLLKLLSFFGYDQAESDLEFKL*
Nucleotide Sequence	ATGACAGGAACAGGAATGCTGGCCCATGAGGGCTCCTCAGTTCCTCACAATCCCAATAAGCCCTCAGCCGCCCGCTCCACCGAGGGGTCTGCCATCTTAGATATTGCTGGTCTCGCTGCAGTGACTGACAACAGATACGAGCCACTGATGCTGAGAAAGCCTGACCGCAGGCGAAGCACAACTCAGACGTGGAGTTTCCGAGAAGGAAAACTGACCTGTGGGTTACATGGGTTGGTCGTCCAGGCCAAAGGAGGACTTTCTGGTTTGTTTGATGGAGCTGAAGTTGTTCTTGGTCCTGACACTTCCATGGAGCTTTTGGGGCCAGTTCCACCTGAACAACAATTTATTAATCAAAAAATGAGACCTGGTTCTGGAATGTTATCCATCAGAGTCATCCCAGATGGACCAACTAGAGCACTCCAGATAACAGATTTCTGCCACCGGAAAAGCAGCCGTTCATATGAAGTGGATGAACTTCCTGTCACCGAACAAGAGCTGCAGAAATTAAAGAATCCAGATACAGAGCAGGAATTGGAAGTGCTTGTGAGGTTAGAAGGTGGAATTGGGTTGTCCTTAATTAATAAAGTCCCAGAAGAACTGGTCTTTGCAAGTCTTACAGGAATCAATGTGCACTATACACAGCTGGCAACCAGTCACATGCTTGAACTCAGCATACAGGATGTACAGGTGGACAATCAGCTCATTGGTACCACGCAGCCCTTCATGCTCTATGTGACTCCCCTGAGCAATGAGAATGAGGTCATCGAGACCGGCCCAGCTGTGCAAGTCAACGCAGTGAAGTTCCCCAGTAAGAGTGCACTGACCAACATCTACAAGCATCTGATGATCACAGCTCAGAGATTCACAGTGCAAATTGAGGAGAAACTGCTCCTCAAGCTGCTAAGTTTCTTTGGCTACGATCAAGCAGAATCAGATTTAGAATTTAAGCTTTAA

CircID	chr1:12373750\|12416827
ORF Type	ORF2
Protein Length	121
Nucleotide Length	363
Protein Sequence	MPKQPGLESSRFMRGEKLSKALKSTLGFPLIRFEDAVINLDPFTRVHPYETKEFIINDILKHFQEELLSQAARILGSVDFLGNPMGLLNDVSEGVTGLIKYGNVGGLIRNVTHGVSNSAAK
Nucleotide Sequence	ATGCCAAAACAGCCAGGACTGGAGAGTTCAAGATTTATGAGAGGAGAGAAACTCAGTAAGGCCCTAAAAAGCACCTTGGGGTTTCCTTTGATACGGTTTGAAGACGCTGTGATTAATCTAGATCCATTCACTCGGGTACATCCCTATGAGACCAAGGAGTTCATCATCAATGATATCCTCAAACATTTCCAGGAGGAACTCCTCAGCCAGGCAGCTCGAATCCTGGGATCAGTGGATTTTCTTGGCAATCCTATGGGGCTTTTGAATGATGTTTCTGAAGGGGTTACTGGACTGATAAAATATGGAAATGTCGGGGGCCTCATCAGAAATGTTACACACGGAGTATCAAACTCTGCTGCCAAG

CircID	chr1:12373750\|12416827
ORF Type	ORF3
Protein Length	89
Nucleotide Length	267
Protein Sequence	MLVDVGQCTLTGELHCVDLHSWAGLDDLILIAQGSHIEHEGLRGTNELIVHLYILYAEFKHVTGCQLCIVHIDSCKTCKDQFFWDFIN*
Nucleotide Sequence	ATGCTTGTAGATGTTGGTCAGTGCACTCTTACTGGGGAACTTCACTGCGTTGACTTGCACAGCTGGGCCGGTCTCGATGACCTCATTCTCATTGCTCAGGGGAGTCACATAGAGCATGAAGGGCTGCGTGGTACCAATGAGCTGATTGTCCACCTGTACATCCTGTATGCTGAGTTCAAGCATGTGACTGGTTGCCAGCTGTGTATAGTGCACATTGATTCCTGTAAGACTTGCAAAGACCAGTTCTTCTGGGACTTTATTAATTAA

CircID	chr1:12373750\|12416827
ORF Type	ORF4
Protein Length	126
Nucleotide Length	378
Protein Sequence	VELAPKAPWKCQDQEQLQLHQTNQKVLLWPGRPTHVTHRSVFLLGNSTSELCFACGQAFSASVARICCQSLQRDQQYLRWQTPRWSGRLRAYWDCEELRSPHGPAFLFLSSSTAENAFLVPSFLK*
Nucleotide Sequence	GTGGAACTGGCCCCAAAAGCTCCATGGAAGTGTCAGGACCAAGAACAACTTCAGCTCCATCAAACAAACCAGAAAGTCCTCCTTTGGCCTGGACGACCAACCCATGTAACCCACAGGTCAGTTTTCCTTCTCGGAAACTCCACGTCTGAGTTGTGCTTCGCCTGCGGTCAGGCTTTCTCAGCATCAGTGGCTCGTATCTGTTGTCAGTCACTGCAGCGAGACCAGCAATATCTAAGATGGCAGACCCCTCGGTGGAGCGGGCGGCTGAGGGCTTATTGGGATTGTGAGGAACTGAGGAGCCCTCATGGGCCAGCATTCCTGTTCCTGTCATCCTCCACAGCTGAGAACGCTTTCCTGGTTCCTTCTTTTTTAAAATGA

CircID	chr1:12373750\|12416827
ORF Type	ORF5
Protein Length	63
Nucleotide Length	189
Protein Sequence	MLCFPLWVGTPVFICIQTATWEPACQRWKNMMKTSMKRQLSKVEHQFDTTLKISKSAFLRSS*
Nucleotide Sequence	ATGCTGTGTTTTCCACTTTGGGTTGGAACGCCAGTGTTTATTTGTATTCAGACAGCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATGAAAAGACAGCTGAGCAAGGTGGAACACCAATTCGATACTACTTTGAAAATCTCAAAATCAGCATTCCTCAGATCAAGCTAA

CircID	chr1:12373750\|12416827
ORF Type	ORF6
Protein Length	60
Nucleotide Length	180
Protein Sequence	MRPPTFPYFISPVTPSETSFKSPIGLPRKSTDPRIRAAWLRSSSWKCLRISLMMNSLVS*
Nucleotide Sequence	ATGAGGCCCCCGACATTTCCATATTTTATCAGTCCAGTAACCCCTTCAGAAACATCATTCAAAAGCCCCATAGGATTGCCAAGAAAATCCACTGATCCCAGGATTCGAGCTGCCTGGCTGAGGAGTTCCTCCTGGAAATGTTTGAGGATATCATTGATGATGAACTCCTTGGTCTCATAG

CircID	chr1:12373750\|12416827
ORF Type	ORF7
Protein Length	45
Nucleotide Length	135
Protein Sequence	MGWSSRPKEDFLVCLMELKLFLVLTLPWSFWGQFHLNNNLLIKK*
Nucleotide Sequence	ATGGGTTGGTCGTCCAGGCCAAAGGAGGACTTTCTGGTTTGTTTGATGGAGCTGAAGTTGTTCTTGGTCCTGACACTTCCATGGAGCTTTTGGGGCCAGTTCCACCTGAACAACAATTTATTAATCAAAAAATGA

CircID	chr1:12373750\|12416827
ORF Type	ORF8
Protein Length	92
Nucleotide Length	276
Protein Sequence	LIPVRLAKTSSSGTLLIKDNPIPPSNLTSTSNSCSVSGFFNFCSSCSVTGSSSTSYERLLFRWQKSVIWSALVGPSGMTLMDNIPEPGLIF*
Nucleotide Sequence	TTGATTCCTGTAAGACTTGCAAAGACCAGTTCTTCTGGGACTTTATTAATTAAGGACAACCCAATTCCACCTTCTAACCTCACAAGCACTTCCAATTCCTGCTCTGTATCTGGATTCTTTAATTTCTGCAGCTCTTGTTCGGTGACAGGAAGTTCATCCACTTCATATGAACGGCTGCTTTTCCGGTGGCAGAAATCTGTTATCTGGAGTGCTCTAGTTGGTCCATCTGGGATGACTCTGATGGATAACATTCCAGAACCAGGTCTCATTTTTTGA

CircID	chr1:12373750\|12416827
ORF Type	ORF9
Protein Length	42
Nucleotide Length	126
Protein Sequence	MEVSGPRTTSAPSNKPESPPLAWTTNPCNPQVSFPSRKLHV*
Nucleotide Sequence	ATGGAAGTGTCAGGACCAAGAACAACTTCAGCTCCATCAAACAAACCAGAAAGTCCTCCTTTGGCCTGGACGACCAACCCATGTAACCCACAGGTCAGTTTTCCTTCTCGGAAACTCCACGTCTGA

CircID	chr1:12373750\|12416827
ORF Type	ORF10
Protein Length	90
Nucleotide Length	270
Protein Sequence	LGSRARSCLFNAVFSTLGWNASVYLYSDSHLGACLPEVEKYDENLHEKTAEQGGTPIRYYFENLKISIPQIKLSVFTSNKLPLDLKSFV*
Nucleotide Sequence	TTGGGATCAAGAGCAAGATCCTGTCTGTTTAATGCTGTGTTTTCCACTTTGGGTTGGAACGCCAGTGTTTATTTGTATTCAGACAGCCACTTGGGAGCCTGCCTGCCAGAGGTGGAAAAATATGATGAAAACCTCCATGAAAAGACAGCTGAGCAAGGTGGAACACCAATTCGATACTACTTTGAAAATCTCAAAATCAGCATTCCTCAGATCAAGCTAAGTGTGTTCACCTCCAACAAGCTCCCATTGGATCTTAAGAGTTTTGTTTAG

CircID	chr1:12373750\|12416827
ORF Type	ORF11
Protein Length	40
Nucleotide Length	120
Protein Sequence	MRPRSSSSMISSNISRRNSSARQLESWDQWIFLAILWGF*
Nucleotide Sequence	ATGAGACCAAGGAGTTCATCATCAATGATATCCTCAAACATTTCCAGGAGGAACTCCTCAGCCAGGCAGCTCGAATCCTGGGATCAGTGGATTTTCTTGGCAATCCTATGGGGCTTTTGA

CircID	chr1:12373750\|12416827
ORF Type	ORF12
Protein Length	37
Nucleotide Length	111
Protein Sequence	MCTIHSWQPVTCLNSAYRMYRWTISSLVPRSPSCSM*
Nucleotide Sequence	ATGTGCACTATACACAGCTGGCAACCAGTCACATGCTTGAACTCAGCATACAGGATGTACAGGTGGACAATCAGCTCATTGGTACCACGCAGCCCTTCATGCTCTATGTGA

CircID	chr1:12373750\|12416827
ORF Type	ORF13
Protein Length	34
Nucleotide Length	102
Protein Sequence	MLVSALLLGNFTALTCTAGPVSMTSFSLLRGVT*
Nucleotide Sequence	ATGTTGGTCAGTGCACTCTTACTGGGGAACTTCACTGCGTTGACTTGCACAGCTGGGCCGGTCTCGATGACCTCATTCTCATTGCTCAGGGGAGTCACATAG

CircID	chr1:12373750\|12416827
ORF Type	ORF14
Protein Length	32
Nucleotide Length	96
Protein Sequence	MTLCVLGETSKTSSAQVMALLEATGLPVPSCK
Nucleotide Sequence	ATGACTCTTTGTGTCTTGGGTGAGACATCCAAAACGAGCTCCGCACAGGTAATGGCCTTGTTGGAAGCCACAGGCCTGCCTGTTCCCTCCTGCAAG

CircID	chr1:12373750\|12416827
ORF Type	ORF15
Protein Length	31
Nucleotide Length	93
Protein Sequence	MAEGIAWDLRPYAKTARTGEFKIYERRETQ*
Nucleotide Sequence	ATGGCCGAGGGAATAGCTTGGGATCTGAGACCTTATGCCAAAACAGCCAGGACTGGAGAGTTCAAGATTTATGAGAGGAGAGAAACTCAGTAA

CircID	chr1:12373750\|12416827
ORF Type	ORF16
Protein Length	70
Nucleotide Length	210
Protein Sequence	VNGSRLITASSNRIKGNPKVLFRALLSFSPLINLELSSPGCFGIRSQIPSYSLGHVLSFLSLSCTKQNS*
Nucleotide Sequence	GTGAATGGATCTAGATTAATCACAGCGTCTTCAAACCGTATCAAAGGAAACCCCAAGGTGCTTTTTAGGGCCTTACTGAGTTTCTCTCCTCTCATAAATCTTGAACTCTCCAGTCCTGGCTGTTTTGGCATAAGGTCTCAGATCCCAAGCTATTCCCTCGGCCATGTCCTTTCCTTTCTTAGTTTATCCTGCACTAAACAAAACTCTTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:12373750\|12416827	ELAVL1	4	6	1
chr1:12373750\|12416827	FAM120A	0	0	1
chr1:12373750\|12416827	SF3B1	0	1	0
chr1:12373750\|12416827	PRPF8	2	0	5
chr1:12373750\|12416827	UPF1	1	1	0
chr1:12373750\|12416827	DDX54	1	2	30
chr1:12373750\|12416827	FMR1	2	0	7
chr1:12373750\|12416827	CPSF6	0	1	0
chr1:12373750\|12416827	TIA1	0	2	0
chr1:12373750\|12416827	CPSF3	1	0	0
chr1:12373750\|12416827	FUS	0	1	1
chr1:12373750\|12416827	DGCR8	0	0	1
chr1:12373750\|12416827	SRSF7	0	0	2
chr1:12373750\|12416827	SRSF1	0	0	3
chr1:12373750\|12416827	NOP58	0	1	11
chr1:12373750\|12416827	U2AF1	1	0	2
chr1:12373750\|12416827	U2AF2	9	4	2
chr1:12373750\|12416827	SRSF9	0	0	1
chr1:12373750\|12416827	TIAL1	0	1	0
chr1:12373750\|12416827	ZNF622	0	0	1
chr1:12373750\|12416827	IGF2BP1	2	0	4
chr1:12373750\|12416827	RBM10	0	1	0
chr1:12373750\|12416827	PCBP2	0	2	0
chr1:12373750\|12416827	HNRNPM	0	1	0
chr1:12373750\|12416827	PTBP1	0	4	1
chr1:12373750\|12416827	HNRNPC	3	2	5
chr1:12373750\|12416827	ZNF184	0	0	1
chr1:12373750\|12416827	LARP4	0	0	1
chr1:12373750\|12416827	ZC3H7B	0	0	1
chr1:12373750\|12416827	SMNDC1	0	0	1
chr1:12373750\|12416827	LIN28B	0	0	4
chr1:12373750\|12416827	RANGAP1	0	0	2
chr1:12373750\|12416827	FXR1	2	0	4
chr1:12373750\|12416827	FXR2	2	0	7
chr1:12373750\|12416827	UCHL5	0	0	1
chr1:12373750\|12416827	BUD13	1	0	1
chr1:12373750\|12416827	IGF2BP3	2	0	3
chr1:12373750\|12416827	IGF2BP2	1	1	7
chr1:12373750\|12416827	TARDBP	0	1	0
chr1:12373750\|12416827	GTF2F1	0	0	1
chr1:12373750\|12416827	RBFOX2	0	2	0
chr1:12373750\|12416827	CSTF2T	0	0	6
chr1:12373750\|12416827	CSTF2	0	2	0
chr1:12373750\|12416827	RBM22	0	1	0
chr1:12373750\|12416827	XRN2	0	0	1
chr1:12373750\|12416827	AGO2	1	2	3
chr1:12373750\|12416827	EIF4A3	2	6	24
chr1:12373750\|12416827	FBL	0	1	2

CircRNA Information