CircRNA Information

General Information
circRNA Basic Information
CircID chr1:1312440|1312805
Strand -
CircType exon
Host Gene ENSG00000127054.17;
Algorism CIRI2;
Sequence GCTGTCCTTCATGATCAGGGTGCCGTGCAGGAGCCGAGGCTTCTTGGCCTCAGGGAGCAGCCCTGCGGAGGAGGTGGCAGGAGCCATCAATGTGAGGGCCGCTCCCAGCCGCCTGCCCCGAGCACCCTGCCCTGCCCTGCCCAGCCCGCATACCCTGCGCCATCTCCCGCTTCAGCAGCCCCAGCGAGATGCCTACGGGGATGCTGGGGCTTGTGGGCAGCGTCACCGTCTCGCCATTGGCCGGCATGTAGCAGTTGACCCGGAGCTCCTGCTCGATCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:1312440|1312805 hsa-miR-23a-5p 0 0 1
chr1:1312440|1312805 hsa-miR-23a-3p 0 0 1
chr1:1312440|1312805 hsa-miR-221-5p 0 0 1
chr1:1312440|1312805 hsa-miR-221-3p 0 0 1
chr1:1312440|1312805 hsa-miR-222-5p 0 0 1
chr1:1312440|1312805 hsa-miR-222-3p 0 0 1
chr1:1312440|1312805 hsa-miR-23b-5p 0 0 1
chr1:1312440|1312805 hsa-miR-23b-3p 0 0 1
chr1:1312440|1312805 hsa-miR-612 1 1 1
chr1:1312440|1312805 hsa-miR-652-5p 0 0 1
chr1:1312440|1312805 hsa-miR-652-3p 0 0 1
chr1:1312440|1312805 hsa-miR-708-5p 0 0 1
chr1:1312440|1312805 hsa-miR-708-3p 0 0 1
chr1:1312440|1312805 hsa-miR-920 0 0 1
chr1:1312440|1312805 hsa-miR-1252-5p 0 0 1
chr1:1312440|1312805 hsa-miR-1252-3p 0 0 1
chr1:1312440|1312805 hsa-miR-423-3p 1 0 1
chr1:1312440|1312805 hsa-miR-486-3p 0 1 1
chr1:1312440|1312805 hsa-miR-324-5p 0 1 1
chr1:1312440|1312805 hsa-miR-28-5p 0 1 1
chr1:1312440|1312805 hsa-miR-338-3p 0 0 1
chr1:1312440|1312805 hsa-miR-1207-5p 1 1 1
chr1:1312440|1312805 hsa-miR-125a-5p 0 1 1
chr1:1312440|1312805 hsa-miR-125b 0 0 1
chr1:1312440|1312805 hsa-miR-1285 0 0 1
chr1:1312440|1312805 hsa-miR-720 0 0 1
chr1:1312440|1312805 hsa-miR-564 1 0 0
chr1:1312440|1312805 hsa-miR-638 1 0 0
chr1:1312440|1312805 hsa-miR-639 1 0 0
chr1:1312440|1312805 hsa-miR-663a 1 0 0
chr1:1312440|1312805 hsa-miR-762 1 1 0
chr1:1312440|1312805 hsa-miR-940 1 0 0
chr1:1312440|1312805 hsa-miR-1291 1 0 0
chr1:1312440|1312805 hsa-miR-1268a 1 0 0
chr1:1312440|1312805 hsa-miR-1976 0 1 0
chr1:1312440|1312805 hsa-miR-544b 0 1 0
chr1:1312440|1312805 hsa-miR-3141 1 0 0
chr1:1312440|1312805 hsa-miR-3147 1 1 0
chr1:1312440|1312805 hsa-miR-3197 1 0 0
chr1:1312440|1312805 hsa-miR-4322 1 0 0
chr1:1312440|1312805 hsa-miR-4323 0 1 0
chr1:1312440|1312805 hsa-miR-4270 1 0 0
chr1:1312440|1312805 hsa-miR-3615 1 0 0
chr1:1312440|1312805 hsa-miR-3621 1 0 0
chr1:1312440|1312805 hsa-miR-3665 1 0 0
chr1:1312440|1312805 hsa-miR-3907 1 1 0
chr1:1312440|1312805 hsa-miR-3937 0 1 0
chr1:1312440|1312805 hsa-miR-1268b 1 0 0
chr1:1312440|1312805 hsa-miR-4449 1 0 0
chr1:1312440|1312805 hsa-miR-3135b 1 0 0
chr1:1312440|1312805 hsa-miR-4466 1 0 0
chr1:1312440|1312805 hsa-miR-4486 1 0 0
chr1:1312440|1312805 hsa-miR-4492 1 1 0
chr1:1312440|1312805 hsa-miR-4498 1 1 0
chr1:1312440|1312805 hsa-miR-4505 1 1 0
chr1:1312440|1312805 hsa-miR-4507 1 0 0
chr1:1312440|1312805 hsa-miR-4525 1 0 0
chr1:1312440|1312805 hsa-miR-1587 1 1 0
chr1:1312440|1312805 hsa-miR-4651 1 0 0
chr1:1312440|1312805 hsa-miR-4656 1 0 0
chr1:1312440|1312805 hsa-miR-4669 1 0 0
chr1:1312440|1312805 hsa-miR-4688 1 0 0
chr1:1312440|1312805 hsa-miR-4706 1 0 0
chr1:1312440|1312805 hsa-miR-4734 1 1 0
chr1:1312440|1312805 hsa-miR-4741 1 0 0
chr1:1312440|1312805 hsa-miR-4767 1 0 0
chr1:1312440|1312805 hsa-miR-5090 1 1 0
chr1:1312440|1312805 hsa-miR-5787 1 1 0
chr1:1312440|1312805 hsa-miR-6071 1 0 0
chr1:1312440|1312805 hsa-miR-6088 1 0 0
chr1:1312440|1312805 hsa-miR-6132 1 1 0
chr1:1312440|1312805 hsa-miR-6165 0 1 0
chr1:1312440|1312805 hsa-miR-6860 1 1 0
chr1:1312440|1312805 hsa-miR-7150 1 0 0
chr1:1312440|1312805 hsa-miR-8072 1 0 0
chr1:1312440|1312805 hsa-miR-8089 1 0 0
chr1:1312440|1312805 hsa-miR-432-3p 1 0 0
chr1:1312440|1312805 hsa-miR-92a-1-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6765-5p 1 1 0
chr1:1312440|1312805 hsa-miR-125b-1-3p 1 0 0
chr1:1312440|1312805 hsa-miR-6861-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6894-5p 1 0 0
chr1:1312440|1312805 hsa-miR-4687-3p 1 1 0
chr1:1312440|1312805 hsa-miR-6799-5p 1 1 0
chr1:1312440|1312805 hsa-miR-6089 1 0 0
chr1:1312440|1312805 hsa-miR-3192-5p 0 1 0
chr1:1312440|1312805 hsa-miR-6746-5p 1 1 0
chr1:1312440|1312805 hsa-miR-4722-5p 0 1 0
chr1:1312440|1312805 hsa-miR-7160-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6890-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6741-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6762-3p 0 1 0
chr1:1312440|1312805 hsa-miR-6727-5p 1 1 0
chr1:1312440|1312805 hsa-miR-6806-5p 0 1 0
chr1:1312440|1312805 hsa-miR-6721-5p 1 1 0
chr1:1312440|1312805 hsa-miR-197-5p 1 0 0
chr1:1312440|1312805 hsa-miR-5589-5p 1 0 0
chr1:1312440|1312805 hsa-miR-4728-3p 1 0 0
chr1:1312440|1312805 hsa-miR-6716-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6829-5p 1 1 0
chr1:1312440|1312805 hsa-miR-2467-3p 1 0 0
chr1:1312440|1312805 hsa-miR-7855-5p 1 0 0
chr1:1312440|1312805 hsa-miR-7109-3p 0 1 0
chr1:1312440|1312805 hsa-miR-6786-5p 1 0 0
chr1:1312440|1312805 hsa-miR-3944-3p 1 0 0
chr1:1312440|1312805 hsa-miR-1229-5p 1 0 0
chr1:1312440|1312805 hsa-miR-4640-5p 1 0 0
chr1:1312440|1312805 hsa-miR-4715-3p 0 1 0
chr1:1312440|1312805 hsa-miR-1908-5p 1 0 0
chr1:1312440|1312805 hsa-miR-1228-5p 1 0 0
chr1:1312440|1312805 hsa-miR-296-3p 1 0 0
chr1:1312440|1312805 hsa-miR-6823-5p 1 0 0
chr1:1312440|1312805 hsa-miR-92b-5p 0 1 0
chr1:1312440|1312805 hsa-miR-4732-5p 1 0 0
chr1:1312440|1312805 hsa-miR-4446-3p 1 1 0
chr1:1312440|1312805 hsa-miR-6824-5p 1 0 0
chr1:1312440|1312805 hsa-miR-1306-5p 0 1 0
chr1:1312440|1312805 hsa-miR-7112-5p 1 1 0
chr1:1312440|1312805 hsa-miR-3190-5p 1 0 0
chr1:1312440|1312805 hsa-miR-1225-5p 1 0 0
chr1:1312440|1312805 hsa-miR-7106-3p 0 1 0
chr1:1312440|1312805 hsa-miR-744-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6792-5p 1 0 0
chr1:1312440|1312805 hsa-miR-2277-5p 1 0 0
chr1:1312440|1312805 hsa-miR-3177-3p 1 1 0
chr1:1312440|1312805 hsa-miR-6729-3p 0 1 0
chr1:1312440|1312805 hsa-miR-1233-5p 1 0 0
chr1:1312440|1312805 hsa-miR-4763-3p 1 1 0
chr1:1312440|1312805 hsa-miR-6778-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6787-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6816-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6870-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6775-5p 1 1 0
chr1:1312440|1312805 hsa-miR-1343-5p 1 1 0
chr1:1312440|1312805 hsa-miR-5001-5p 1 1 0
chr1:1312440|1312805 hsa-miR-6726-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6743-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6756-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6803-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6819-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6851-5p 1 0 0
chr1:1312440|1312805 hsa-miR-7107-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6722-3p 1 0 0
chr1:1312440|1312805 hsa-miR-6774-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6779-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6808-5p 1 1 0
chr1:1312440|1312805 hsa-miR-6879-5p 1 1 0
chr1:1312440|1312805 hsa-miR-3620-5p 1 1 0
chr1:1312440|1312805 hsa-miR-4728-5p 1 0 0
chr1:1312440|1312805 hsa-miR-5189-5p 1 0 0
chr1:1312440|1312805 hsa-miR-5196-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6780b-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6836-5p 1 1 0
chr1:1312440|1312805 hsa-miR-10396a-5p 1 0 0
chr1:1312440|1312805 hsa-miR-10396b-5p 1 0 0
chr1:1312440|1312805 hsa-miR-1909-3p 1 0 0
chr1:1312440|1312805 hsa-miR-328-5p 1 0 0
chr1:1312440|1312805 hsa-miR-4632-5p 1 1 0
chr1:1312440|1312805 hsa-miR-4649-5p 1 0 0
chr1:1312440|1312805 hsa-miR-4725-3p 1 0 0
chr1:1312440|1312805 hsa-miR-6729-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6735-5p 1 1 0
chr1:1312440|1312805 hsa-miR-6846-5p 1 1 0
chr1:1312440|1312805 hsa-miR-6848-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6858-5p 1 0 0
chr1:1312440|1312805 hsa-miR-3187-5p 1 1 0
chr1:1312440|1312805 hsa-miR-939-5p 1 0 0
chr1:1312440|1312805 hsa-miR-3940-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6731-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6785-5p 1 0 0
chr1:1312440|1312805 hsa-miR-6791-5p 1 1 0
chr1:1312440|1312805 hsa-miR-4722-3p 0 1 0
chr1:1312440|1312805 hsa-miR-6727-3p 1 1 0
chr1:1312440|1312805 hsa-miR-4676-5p 1 0 0
chr1:1312440|1312805 hsa-miR-433-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:1312440|1312805
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MPCPAQPAYPAPSPASAAPARCLRGCWGLWAASPSRHWPACSS
Nucleotide Sequence CTGCCCTGCCCTGCCCAGCCCGCATACCCTGCGCCATCTCCCGCTTCAGCAGCCCCAGCGAGATGCCTACGGGGATGCTGGGGCTTGTGGGCAGCGTCACCGTCTCGCCATTGGCCGGCATGTAGCAGTTGA
CircID chr1:1312440|1312805
ORF Type ORF2
Protein Length 93
Nucleotide Length 279
Protein Sequence LSFMIRVPCRSRGFLASGSSPAEEVAGAINVRAAPSRLPRAPCPALPSPHTLRHLPLQQPQRDAYGDAGACGQRHRLAIGRHVAVDPELLLDL
Nucleotide Sequence CTGTCCTTCATGATCAGGGTGCCGTGCAGGAGCCGAGGCTTCTTGGCCTCAGGGAGCAGCCCTGCGGAGGAGGTGGCAGGAGCCATCAATGTGAGGGCCGCTCCCAGCCGCCTGCCCCGAGCACCCTGCCCTGCCCTGCCCAGCCCGCATACCCTGCGCCATCTCCCGCTTCAGCAGCCCCAGCGAGATGCCTACGGGGATGCTGGGGCTTGTGGGCAGCGTCACCGTCTCGCCATTGGCCGGCATGTAGCAGTTGACCCGGAGCTCCTGCTCGATCTT
CircID chr1:1312440|1312805
ORF Type ORF3
Protein Length 39
Nucleotide Length 120
Protein Sequence MPCPARIPCAISRFSSPSEMPTGMLGLVGSVTVSPLAGM
Nucleotide Sequence CTGCCCTGCCCAGCCCGCATACCCTGCGCCATCTCCCGCTTCAGCAGCCCCAGCGAGATGCCTACGGGGATGCTGGGGCTTGTGGGCAGCGTCACCGTCTCGCCATTGGCCGGCATGTAG
CircID chr1:1312440|1312805
ORF Type ORF4
Protein Length 65
Nucleotide Length 198
Protein Sequence MPANGETVTLPTSPSIPVGISLGLLKREMAQGMRAGQGRAGCSGQAAGSGPHIDGSCHLLRRAAP
Nucleotide Sequence ATGCCGGCCAATGGCGAGACGGTGACGCTGCCCACAAGCCCCAGCATCCCCGTAGGCATCTCGCTGGGGCTGCTGAAGCGGGAGATGGCGCAGGGTATGCGGGCTGGGCAGGGCAGGGCAGGGTGCTCGGGGCAGGCGGCTGGGAGCGGCCCTCACATTGATGGCTCCTGCCACCTCCTCCGCAGGGCTGCTCCCTGA
CircID chr1:1312440|1312805
ORF Type ORF5
Protein Length 48
Nucleotide Length 144
Protein Sequence MGRAGQGARGRRLGAALTLMAPATSSAGLLPEAKKPRLLHGTLIMKDS
Nucleotide Sequence CTGGGCAGGGCAGGGCAGGGTGCTCGGGGCAGGCGGCTGGGAGCGGCCCTCACATTGATGGCTCCTGCCACCTCCTCCGCAGGGCTGCTCCCTGAGGCCAAGAAGCCTCGGCTCCTGCACGGCACCCTGATCATGAAGGACAGC
CircID chr1:1312440|1312805
ORF Type ORF6
Protein Length 55
Nucleotide Length 168
Protein Sequence MLHAGQWRDGDAAHKPQHPRRHLAGAAEAGDGAGYAGWAGQGRVLGAGGWERPSH
Nucleotide Sequence CTGCTACATGCCGGCCAATGGCGAGACGGTGACGCTGCCCACAAGCCCCAGCATCCCCGTAGGCATCTCGCTGGGGCTGCTGAAGCGGGAGATGGCGCAGGGTATGCGGGCTGGGCAGGGCAGGGCAGGGTGCTCGGGGCAGGCGGCTGGGAGCGGCCCTCACATTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab