CircRNA Information

General Information
circRNA Basic Information
CircID chr1:1387521|1387859
Strand -
CircType exon
Host Gene ENSG00000221978.10;
Algorism CIRI2;
Sequence TCCTGCTCCGGGAGCGGCTCTGCGACTTGGACCCACCAGATGTGGAGCCGCTGTCACTTTTCCTGGGAGGAAGAACAGCACCACCACACGTGTGACCATCTGGCCCGGCCAGGCCCCACACACCCACAGGAGCTCAGACAAGACACACAAGCTCCAGGTTTAGAGAAACAAGAAACCACCTCAGGGTGAGAATGATTACCCCGAGGGACAGCCCCACCCCGGTATCGGCCTCCTGGGTGCGCCCTGAGGCACACACCTCCTCTTAGGAGACGCTGATCGGGATGGGGACCTCGAGTAGCTCTGCTCACGGCTCCGGCTCCGACTCCGACTCTCTCGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:1387521|1387859 hsa-miR-431-5p 0 0 1
chr1:1387521|1387859 hsa-miR-431-3p 0 0 1
chr1:1387521|1387859 hsa-miR-578 0 1 1
chr1:1387521|1387859 hsa-miR-581 0 0 1
chr1:1387521|1387859 hsa-miR-608 1 1 1
chr1:1387521|1387859 hsa-miR-609 0 0 1
chr1:1387521|1387859 hsa-miR-619-5p 0 0 1
chr1:1387521|1387859 hsa-miR-619-3p 0 0 1
chr1:1387521|1387859 hsa-miR-632 1 0 1
chr1:1387521|1387859 hsa-miR-541-5p 0 0 1
chr1:1387521|1387859 hsa-miR-541-3p 0 0 1
chr1:1387521|1387859 hsa-miR-665 0 1 1
chr1:1387521|1387859 hsa-miR-1229-5p 0 0 1
chr1:1387521|1387859 hsa-miR-1229-3p 0 0 1
chr1:1387521|1387859 hsa-miR-1231 0 0 1
chr1:1387521|1387859 hsa-miR-1203 0 1 1
chr1:1387521|1387859 hsa-miR-1266-5p 0 0 1
chr1:1387521|1387859 hsa-miR-1266-3p 0 0 1
chr1:1387521|1387859 hsa-miR-491-5p 0 0 1
chr1:1387521|1387859 hsa-miR-490-3p 0 0 1
chr1:1387521|1387859 hsa-miR-654-5p 0 0 1
chr1:1387521|1387859 hsa-miR-876-3p 0 0 1
chr1:1387521|1387859 hsa-miR-125a-5p 0 0 1
chr1:1387521|1387859 hsa-miR-542-3p 0 0 1
chr1:1387521|1387859 hsa-miR-323-5p 0 0 1
chr1:1387521|1387859 hsa-miR-125b 0 0 1
chr1:1387521|1387859 hsa-miR-550 0 0 1
chr1:1387521|1387859 hsa-miR-644 0 0 1
chr1:1387521|1387859 hsa-miR-147 0 0 1
chr1:1387521|1387859 hsa-miR-612 1 1 0
chr1:1387521|1387859 hsa-miR-1293 1 0 0
chr1:1387521|1387859 hsa-miR-2861 1 1 0
chr1:1387521|1387859 hsa-miR-544b 0 1 0
chr1:1387521|1387859 hsa-miR-4254 0 1 0
chr1:1387521|1387859 hsa-miR-3907 1 0 0
chr1:1387521|1387859 hsa-miR-4455 0 1 0
chr1:1387521|1387859 hsa-miR-4498 1 0 0
chr1:1387521|1387859 hsa-miR-4537 1 0 0
chr1:1387521|1387859 hsa-miR-4651 0 1 0
chr1:1387521|1387859 hsa-miR-4682 1 0 0
chr1:1387521|1387859 hsa-miR-4741 1 1 0
chr1:1387521|1387859 hsa-miR-4785 0 1 0
chr1:1387521|1387859 hsa-miR-6124 0 1 0
chr1:1387521|1387859 hsa-miR-6127 1 0 0
chr1:1387521|1387859 hsa-miR-128-1-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6840-3p 0 1 0
chr1:1387521|1387859 hsa-miR-7155-5p 1 0 0
chr1:1387521|1387859 hsa-miR-1247-3p 0 1 0
chr1:1387521|1387859 hsa-miR-6765-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6825-5p 0 1 0
chr1:1387521|1387859 hsa-miR-6857-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6799-5p 1 0 0
chr1:1387521|1387859 hsa-miR-1227-5p 0 1 0
chr1:1387521|1387859 hsa-miR-7114-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6089 1 1 0
chr1:1387521|1387859 hsa-miR-6867-5p 0 1 0
chr1:1387521|1387859 hsa-miR-6875-3p 1 1 0
chr1:1387521|1387859 hsa-miR-6727-5p 1 1 0
chr1:1387521|1387859 hsa-miR-6759-5p 0 1 0
chr1:1387521|1387859 hsa-miR-4677-5p 0 1 0
chr1:1387521|1387859 hsa-miR-3151-5p 1 1 0
chr1:1387521|1387859 hsa-miR-6748-5p 0 1 0
chr1:1387521|1387859 hsa-miR-6796-5p 1 1 0
chr1:1387521|1387859 hsa-miR-185-3p 0 1 0
chr1:1387521|1387859 hsa-miR-2277-3p 0 1 0
chr1:1387521|1387859 hsa-miR-6749-5p 1 0 0
chr1:1387521|1387859 hsa-miR-550b-2-5p 0 1 0
chr1:1387521|1387859 hsa-miR-6781-5p 1 1 0
chr1:1387521|1387859 hsa-miR-7162-3p 0 1 0
chr1:1387521|1387859 hsa-miR-574-5p 1 0 0
chr1:1387521|1387859 hsa-miR-4724-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6722-5p 0 1 0
chr1:1387521|1387859 hsa-miR-6816-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6726-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6752-5p 1 1 0
chr1:1387521|1387859 hsa-miR-6756-5p 1 1 0
chr1:1387521|1387859 hsa-miR-6803-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6851-5p 1 1 0
chr1:1387521|1387859 hsa-miR-10396b-5p 1 0 0
chr1:1387521|1387859 hsa-miR-1237-5p 1 0 0
chr1:1387521|1387859 hsa-miR-4649-5p 0 1 0
chr1:1387521|1387859 hsa-miR-4745-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6729-5p 0 1 0
chr1:1387521|1387859 hsa-miR-6846-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6848-5p 1 0 0
chr1:1387521|1387859 hsa-miR-6845-5p 1 0 0
chr1:1387521|1387859 hsa-miR-4758-5p 1 0 0
chr1:1387521|1387859 hsa-miR-5008-3p 1 0 0
chr1:1387521|1387859 hsa-miR-6766-5p 0 1 0
chr1:1387521|1387859 hsa-miR-3689d 1 1 0
chr1:1387521|1387859 hsa-miR-323b-5p 1 0 0
chr1:1387521|1387859 hsa-miR-548az-5p 0 1 0
chr1:1387521|1387859 hsa-miR-125b-5p 0 1 0
chr1:1387521|1387859 hsa-miR-548t-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:1387521|1387859
ORF Type ORF1
Protein Length 49
Nucleotide Length 150
Protein Sequence MWSRCHFSWEEEQHHHTCDHLARPGPTHPQELRQDTQAPGLEKQETTSG
Nucleotide Sequence ATGTGGAGCCGCTGTCACTTTTCCTGGGAGGAAGAACAGCACCACCACACGTGTGACCATCTGGCCCGGCCAGGCCCCACACACCCACAGGAGCTCAGACAAGACACACAAGCTCCAGGTTTAGAGAAACAAGAAACCACCTCAGGGTGA

CircID chr1:1387521|1387859
ORF Type ORF2
Protein Length 47
Nucleotide Length 144
Protein Sequence MRLGPTRCGAAVTFPGRKNSTTTRVTIWPGQAPHTHRSSDKTHKLQV
Nucleotide Sequence CTGCGACTTGGACCCACCAGATGTGGAGCCGCTGTCACTTTTCCTGGGAGGAAGAACAGCACCACCACACGTGTGACCATCTGGCCCGGCCAGGCCCCACACACCCACAGGAGCTCAGACAAGACACACAAGCTCCAGGTTTAG

CircID chr1:1387521|1387859
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence LLRERLCDLDPPDVEPLSLFLGGRTAPPHV
Nucleotide Sequence CTGCTCCGGGAGCGGCTCTGCGACTTGGACCCACCAGATGTGGAGCCGCTGTCACTTTTCCTGGGAGGAAGAACAGCACCACCACACGTGTGA

CircID chr1:1387521|1387859
ORF Type ORF4
Protein Length 50
Nucleotide Length 150
Protein Sequence MCVLSELLWVCGAWPGQMVTRVVVLFFLPGKVTAAPHLVGPSRRAAPGAG
Nucleotide Sequence TTGTGTGTCTTGTCTGAGCTCCTGTGGGTGTGTGGGGCCTGGCCGGGCCAGATGGTCACACGTGTGGTGGTGCTGTTCTTCCTCCCAGGAAAAGTGACAGCGGCTCCACATCTGGTGGGTCCAAGTCGCAGAGCCGCTCCCGGAGCAGGA

CircID chr1:1387521|1387859
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MSSCGCVGPGRARWSHVWWCCSSSQEK
Nucleotide Sequence CTGAGCTCCTGTGGGTGTGTGGGGCCTGGCCGGGCCAGATGGTCACACGTGTGGTGGTGCTGTTCTTCCTCCCAGGAAAAGTGA

CircID chr1:1387521|1387859
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MSLGVIILTLRWFLVSLNLELVCLV
Nucleotide Sequence CTGTCCCTCGGGGTAATCATTCTCACCCTGAGGTGGTTTCTTGTTTCTCTAAACCTGGAGCTTGTGTGTCTTGTCTGA

CircID chr1:1387521|1387859
ORF Type ORF7
Protein Length 37
Nucleotide Length 111
Protein Sequence MAGPDGHTCGGAVLPPRKSDSGSTSGGSKSQSRSRSR
Nucleotide Sequence CTGGCCGGGCCAGATGGTCACACGTGTGGTGGTGCTGTTCTTCCTCCCAGGAAAAGTGACAGCGGCTCCACATCTGGTGGGTCCAAGTCGCAGAGCCGCTCCCGGAGCAGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites