CircRNA Information

General Information
circRNA Basic Information
CircID chr1:1437334|1437444
Strand -
CircType exon
Host Gene ENSG00000179403.11;
Algorism CIRI2;
Sequence CTGGGCGTCACCGTGTTCATTGTCAGCACCGGCCGAGGCAACTTCCTGGAGCTGTCAGCCGCTGCCTCAGCCCCTGCCGAGAAGCACCTGCACTTTGTGGACGTGGATGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:1437334|1437444 hsa-miR-17-5p 0 0 1
chr1:1437334|1437444 hsa-miR-17-3p 0 0 1
chr1:1437334|1437444 hsa-miR-20a-5p 0 0 1
chr1:1437334|1437444 hsa-miR-20a-3p 0 0 1
chr1:1437334|1437444 hsa-miR-93-5p 0 0 1
chr1:1437334|1437444 hsa-miR-93-3p 0 0 1
chr1:1437334|1437444 hsa-miR-106a-5p 0 0 1
chr1:1437334|1437444 hsa-miR-106a-3p 0 0 1
chr1:1437334|1437444 hsa-miR-106b-5p 0 0 1
chr1:1437334|1437444 hsa-miR-106b-3p 0 0 1
chr1:1437334|1437444 hsa-miR-20b-5p 0 0 1
chr1:1437334|1437444 hsa-miR-20b-3p 0 0 1
chr1:1437334|1437444 hsa-miR-519d-5p 0 0 1
chr1:1437334|1437444 hsa-miR-519d-3p 0 0 1
chr1:1437334|1437444 hsa-miR-520g-5p 0 0 1
chr1:1437334|1437444 hsa-miR-520g-3p 0 0 1
chr1:1437334|1437444 hsa-miR-520h 0 0 1
chr1:1437334|1437444 hsa-miR-657 0 0 1
chr1:1437334|1437444 hsa-miR-665 0 0 1
chr1:1437334|1437444 hsa-miR-1250-5p 0 0 1
chr1:1437334|1437444 hsa-miR-1250-3p 0 0 1
chr1:1437334|1437444 hsa-miR-1307-5p 0 0 1
chr1:1437334|1437444 hsa-miR-1307-3p 0 0 1
chr1:1437334|1437444 hsa-miR-1827 0 1 1
chr1:1437334|1437444 hsa-miR-885-3p 0 0 1
chr1:1437334|1437444 hsa-miR-628-5p 0 0 1
chr1:1437334|1437444 hsa-miR-1207-5p 1 1 1
chr1:1437334|1437444 hsa-miR-519b-3p 0 0 1
chr1:1437334|1437444 hsa-miR-519c-3p 0 0 1
chr1:1437334|1437444 hsa-miR-519a 0 0 1
chr1:1437334|1437444 hsa-miR-612 1 0 0
chr1:1437334|1437444 hsa-miR-663a 1 0 0
chr1:1437334|1437444 hsa-miR-762 1 1 0
chr1:1437334|1437444 hsa-miR-764 0 1 0
chr1:1437334|1437444 hsa-miR-1469 1 0 0
chr1:1437334|1437444 hsa-miR-3665 1 0 0
chr1:1437334|1437444 hsa-miR-4498 1 0 0
chr1:1437334|1437444 hsa-miR-3960 1 0 0
chr1:1437334|1437444 hsa-miR-4656 1 1 0
chr1:1437334|1437444 hsa-miR-5787 1 0 0
chr1:1437334|1437444 hsa-miR-6085 1 1 0
chr1:1437334|1437444 hsa-miR-6860 1 0 0
chr1:1437334|1437444 hsa-miR-7150 1 0 0
chr1:1437334|1437444 hsa-miR-8072 1 0 0
chr1:1437334|1437444 hsa-miR-6765-5p 1 0 0
chr1:1437334|1437444 hsa-miR-6861-5p 1 0 0
chr1:1437334|1437444 hsa-miR-3934-5p 1 0 0
chr1:1437334|1437444 hsa-miR-7160-5p 0 1 0
chr1:1437334|1437444 hsa-miR-6721-5p 1 0 0
chr1:1437334|1437444 hsa-miR-1229-5p 1 0 0
chr1:1437334|1437444 hsa-miR-4691-3p 1 0 0
chr1:1437334|1437444 hsa-miR-1228-5p 1 0 0
chr1:1437334|1437444 hsa-miR-6771-5p 1 0 0
chr1:1437334|1437444 hsa-miR-4638-5p 0 1 0
chr1:1437334|1437444 hsa-miR-2277-5p 1 0 0
chr1:1437334|1437444 hsa-miR-10400-5p 1 0 0
chr1:1437334|1437444 hsa-miR-4763-3p 1 1 0
chr1:1437334|1437444 hsa-miR-6787-5p 1 1 0
chr1:1437334|1437444 hsa-miR-5001-5p 1 1 0
chr1:1437334|1437444 hsa-miR-6803-5p 1 0 0
chr1:1437334|1437444 hsa-miR-6813-5p 1 1 0
chr1:1437334|1437444 hsa-miR-6722-3p 1 1 0
chr1:1437334|1437444 hsa-miR-6779-5p 1 0 0
chr1:1437334|1437444 hsa-miR-4728-5p 1 0 0
chr1:1437334|1437444 hsa-miR-10396b-5p 1 0 0
chr1:1437334|1437444 hsa-miR-1909-3p 0 1 0
chr1:1437334|1437444 hsa-miR-3187-5p 1 0 0
chr1:1437334|1437444 hsa-miR-9851-5p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:1437334|1437444
ORF Type ORF1
Protein Length 37
Nucleotide Length 111
Protein Sequence LGVTVFIVSTGRGNFLELSAAASAPAEKHLHFVDVDD
Nucleotide Sequence CTGGGCGTCACCGTGTTCATTGTCAGCACCGGCCGAGGCAACTTCCTGGAGCTGTCAGCCGCTGCCTCAGCCCCTGCCGAGAAGCACCTGCACTTTGTGGACGTGGATGAC
CircID chr1:1437334|1437444
ORF Type ORF2
Protein Length 30
Nucleotide Length 90
Protein Sequence MSAPAEATSWSCQPLPQPLPRSTCTLWTWM
Nucleotide Sequence TTGTCAGCACCGGCCGAGGCAACTTCCTGGAGCTGTCAGCCGCTGCCTCAGCCCCTGCCGAGAAGCACCTGCACTTTGTGGACGTGGATG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab