CircNet

General Information

circRNA Basic Information

CircID	chr1:145974825\|145975436
Strand	+
CircType	exon
Host Gene	ENSG00000121851.12;
Algorism	CIRI2;
Sequence	GTTTATTCACTGGATCTCTGAATACCCAGGCCCCCTCCACCATGGCCAGCCGGGGTGGGGGCCGGGGTCGTGGCCGGGGCCAGTTGACCTTCAACGTGGAGGCCGTGGGCATTGGGAAAGGGGATGCTTTGCCCCCACCCACCCTGCAGCCTTCTCCACTCTTCCCTGTGAGTCTCTCCACTCCCTTCCCAGACTCTCATGTGCCCCTGGCTGACTGTACATGATTCTGAATTCCTCCTGGACCATCATAAAACCATCCTCGCTTTGGCCCTCTCTCTATACTCCCAATGCACAGGGATGTTTTGCAGGCAAAGAAGTGTCCACCTTTACTTCTCCCCAGCTTTCAAAATAATATGTTACTCCCTCGATTGTCATTTGGCCCTCTGCTCAGTGGGAGTGTTAGACTAAATTGGGAGGAGGGGTCTTCCTAAATTTGTACTAGCATTTTCTCCCTGAACTGACCACTGCCCCTGCCTCTTTAGCCCTTGGAGTTCCGCCCAGTACCTTTGCCCTCAGGCGAGGAAGGGGAATATGTCCTGGCACTGAAGCAAGAGCTACGAGGAGCCATGAGGCAGCTCCCCTACTTCATCCGGCCAGCTGTCCCCAAGAGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:145974825\|145975436	hsa-miR-96-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:145974825\|145975436
ORF Type	ORF1
Protein Length	70
Nucleotide Length	210
Protein Sequence	MCPWLTVHDSEFLLDHHKTILALALSLYSQCTGMFCRQRSVHLYFSPAFKIICYSLDCHLALCSVGVLD*
Nucleotide Sequence	ATGTGCCCCTGGCTGACTGTACATGATTCTGAATTCCTCCTGGACCATCATAAAACCATCCTCGCTTTGGCCCTCTCTCTATACTCCCAATGCACAGGGATGTTTTGCAGGCAAAGAAGTGTCCACCTTTACTTCTCCCCAGCTTTCAAAATAATATGTTACTCCCTCGATTGTCATTTGGCCCTCTGCTCAGTGGGAGTGTTAGACTAA

CircID	chr1:145974825\|145975436
ORF Type	ORF2
Protein Length	66
Nucleotide Length	198
Protein Sequence	MRVWEGSGETHREEWRRLQGGWGQSIPFPNAHGLHVEGQLAPATTPAPTPAGHGGGGLGIQRSSE*
Nucleotide Sequence	ATGAGAGTCTGGGAAGGGAGTGGAGAGACTCACAGGGAAGAGTGGAGAAGGCTGCAGGGTGGGTGGGGGCAAAGCATCCCCTTTCCCAATGCCCACGGCCTCCACGTTGAAGGTCAACTGGCCCCGGCCACGACCCCGGCCCCCACCCCGGCTGGCCATGGTGGAGGGGGCCTGGGTATTCAGAGATCCAGTGAATAA

CircID	chr1:145974825\|145975436
ORF Type	ORF3
Protein Length	61
Nucleotide Length	183
Protein Sequence	MASRGGGRGRGRGQLTFNVEAVGIGKGDALPPPTLQPSPLFPVSLSTPFPDSHVPLADCT*
Nucleotide Sequence	ATGGCCAGCCGGGGTGGGGGCCGGGGTCGTGGCCGGGGCCAGTTGACCTTCAACGTGGAGGCCGTGGGCATTGGGAAAGGGGATGCTTTGCCCCCACCCACCCTGCAGCCTTCTCCACTCTTCCCTGTGAGTCTCTCCACTCCCTTCCCAGACTCTCATGTGCCCCTGGCTGACTGTACATGA

CircID	chr1:145974825\|145975436
ORF Type	ORF4
Protein Length	53
Nucleotide Length	159
Protein Sequence	MMVQEEFRIMYSQPGAHESLGREWRDSQGRVEKAAGWVGAKHPLSQCPRPPR*
Nucleotide Sequence	ATGATGGTCCAGGAGGAATTCAGAATCATGTACAGTCAGCCAGGGGCACATGAGAGTCTGGGAAGGGAGTGGAGAGACTCACAGGGAAGAGTGGAGAAGGCTGCAGGGTGGGTGGGGGCAAAGCATCCCCTTTCCCAATGCCCACGGCCTCCACGTTGA

CircID	chr1:145974825\|145975436
ORF Type	ORF5
Protein Length	48
Nucleotide Length	144
Protein Sequence	MHRDVLQAKKCPPLLLPSFQNNMLLPRLSFGPLLSGSVRLNWEEGSS*
Nucleotide Sequence	ATGCACAGGGATGTTTTGCAGGCAAAGAAGTGTCCACCTTTACTTCTCCCCAGCTTTCAAAATAATATGTTACTCCCTCGATTGTCATTTGGCCCTCTGCTCAGTGGGAGTGTTAGACTAAATTGGGAGGAGGGGTCTTCCTAA

CircID	chr1:145974825\|145975436
ORF Type	ORF6
Protein Length	44
Nucleotide Length	132
Protein Sequence	MILNSSWTIIKPSSLWPSLYTPNAQGCFAGKEVSTFTSPQLSK*
Nucleotide Sequence	ATGATTCTGAATTCCTCCTGGACCATCATAAAACCATCCTCGCTTTGGCCCTCTCTCTATACTCCCAATGCACAGGGATGTTTTGCAGGCAAAGAAGTGTCCACCTTTACTTCTCCCCAGCTTTCAAAATAA

CircID	chr1:145974825\|145975436
ORF Type	ORF7
Protein Length	37
Nucleotide Length	111
Protein Sequence	MPTASTLKVNWPRPRPRPPPRLAMVEGAWVFRDPVNK
Nucleotide Sequence	ATGCCCACGGCCTCCACGTTGAAGGTCAACTGGCCCCGGCCACGACCCCGGCCCCCACCCCGGCTGGCCATGGTGGAGGGGGCCTGGGTATTCAGAGATCCAGTGAATAAA

CircID	chr1:145974825\|145975436
ORF Type	ORF8
Protein Length	33
Nucleotide Length	99
Protein Sequence	MTIEGVTYYFESWGEVKVDTSLPAKHPCALGV*
Nucleotide Sequence	ATGACAATCGAGGGAGTAACATATTATTTTGAAAGCTGGGGAGAAGTAAAGGTGGACACTTCTTTGCCTGCAAAACATCCCTGTGCATTGGGAGTATAG

CircID	chr1:145974825\|145975436
ORF Type	ORF9
Protein Length	30
Nucleotide Length	90
Protein Sequence	MAPRSSCFSARTYSPSSPEGKGTGRNSKG*
Nucleotide Sequence	ATGGCTCCTCGTAGCTCTTGCTTCAGTGCCAGGACATATTCCCCTTCCTCGCCTGAGGGCAAAGGTACTGGGCGGAACTCCAAGGGCTAA

CircID	chr1:145974825\|145975436
ORF Type	ORF10
Protein Length	56
Nucleotide Length	168
Protein Sequence	HFLPELTTAPASLALGVPPSTFALRRGRGICPGTEARATRSHEAAPLLHPASCPQE
Nucleotide Sequence	CATTTTCTCCCTGAACTGACCACTGCCCCTGCCTCTTTAGCCCTTGGAGTTCCGCCCAGTACCTTTGCCCTCAGGCGAGGAAGGGGAATATGTCCTGGCACTGAAGCAAGAGCTACGAGGAGCCATGAGGCAGCTCCCCTACTTCATCCGGCCAGCTGTCCCCAAGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:145974825\|145975436	KHSRP	2	0	0
chr1:145974825\|145975436	FUS	0	3	0
chr1:145974825\|145975436	DHX9	1	0	0
chr1:145974825\|145975436	SF3B4	0	0	1
chr1:145974825\|145975436	FAM120A	0	0	1
chr1:145974825\|145975436	CELF2	2	0	0
chr1:145974825\|145975436	PRPF8	0	0	1
chr1:145974825\|145975436	UPF1	1	1	0
chr1:145974825\|145975436	FMR1	0	0	5
chr1:145974825\|145975436	DGCR8	0	0	1
chr1:145974825\|145975436	NONO	0	0	1
chr1:145974825\|145975436	U2AF2	1	0	4
chr1:145974825\|145975436	DDX54	0	0	3
chr1:145974825\|145975436	PCBP2	0	0	1
chr1:145974825\|145975436	TRA2A	1	0	1
chr1:145974825\|145975436	ZNF184	0	0	1
chr1:145974825\|145975436	DDX3X	0	0	4
chr1:145974825\|145975436	SMNDC1	0	0	2
chr1:145974825\|145975436	RANGAP1	1	0	2
chr1:145974825\|145975436	FXR1	0	0	1
chr1:145974825\|145975436	FXR2	0	0	1
chr1:145974825\|145975436	SND1	1	0	1
chr1:145974825\|145975436	IGF2BP1	0	0	1
chr1:145974825\|145975436	GTF2F1	1	0	0
chr1:145974825\|145975436	IGF2BP3	0	0	1
chr1:145974825\|145975436	IGF2BP2	0	0	3
chr1:145974825\|145975436	BUD13	0	0	1
chr1:145974825\|145975436	RBFOX2	1	0	0
chr1:145974825\|145975436	EIF4G2	0	0	1
chr1:145974825\|145975436	DDX42	0	0	1
chr1:145974825\|145975436	CSTF2T	0	0	1
chr1:145974825\|145975436	U2AF1	1	0	2
chr1:145974825\|145975436	EIF4A3	0	0	4

CircRNA Information