CircRNA Information

General Information
circRNA Basic Information
CircID chr1:145977803|145978096
Strand +
CircType exon
Host Gene ENSG00000280778.1;
Algorism CIRI2;
Sequence CTCTTCATGTTCTTCTTCATCATACTCTTCTTCTTCCTCCTCTTCCTTCTCTTCTTCTTCTTCTTTCTCCTCATCCTCCTCTGAAGTTACTTCTTCTTCCTTCTTCTCCAGGGTCTCATGTGGGGATGAATAGGAATAGAAACTCAGGTTCAGTTCACAGAAGGGAAAAATTGAGGCACACATGGGCCAAGAGAGAGGGAATGGATCCAGGGCTCAGGAGGTCTCTATGCACACTTCCTCCTCACCTCTAGTTTCTGTATTGTTTCCTCCTTATCTTCTGTGGTCTTAGGGGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:145977803|145978096 hsa-miR-204-5p 0 0 1
chr1:145977803|145978096 hsa-miR-204-3p 0 0 1
chr1:145977803|145978096 hsa-miR-211-5p 0 0 1
chr1:145977803|145978096 hsa-miR-211-3p 0 0 1
chr1:145977803|145978096 hsa-miR-328-5p 0 0 1
chr1:145977803|145978096 hsa-miR-328-3p 0 0 1
chr1:145977803|145978096 hsa-miR-504-5p 0 0 1
chr1:145977803|145978096 hsa-miR-504-3p 0 0 1
chr1:145977803|145978096 hsa-miR-595 0 1 1
chr1:145977803|145978096 hsa-miR-623 0 0 1
chr1:145977803|145978096 hsa-miR-648 0 0 1
chr1:145977803|145978096 hsa-miR-1237-5p 0 0 1
chr1:145977803|145978096 hsa-miR-1237-3p 0 0 1
chr1:145977803|145978096 hsa-miR-1200 0 0 1
chr1:145977803|145978096 hsa-miR-1253 0 0 1
chr1:145977803|145978096 hsa-miR-1255a 1 0 1
chr1:145977803|145978096 hsa-miR-1272 0 0 1
chr1:145977803|145978096 hsa-miR-1252-5p 0 0 1
chr1:145977803|145978096 hsa-miR-1252-3p 0 0 1
chr1:145977803|145978096 hsa-miR-1322 0 0 1
chr1:145977803|145978096 hsa-miR-1225-3p 0 0 1
chr1:145977803|145978096 hsa-miR-769-5p 1 0 1
chr1:145977803|145978096 hsa-miR-140-3p 0 0 1
chr1:145977803|145978096 hsa-miR-337-3p 0 0 1
chr1:145977803|145978096 hsa-miR-1233 0 0 1
chr1:145977803|145978096 hsa-miR-550 0 0 1
chr1:145977803|145978096 hsa-miR-642 0 0 1
chr1:145977803|145978096 hsa-miR-1255b 0 0 1
chr1:145977803|145978096 hsa-miR-153 0 0 1
chr1:145977803|145978096 hsa-miR-664 0 0 1
chr1:145977803|145978096 hsa-miR-765 1 0 0
chr1:145977803|145978096 hsa-miR-298 1 0 0
chr1:145977803|145978096 hsa-miR-1183 1 0 0
chr1:145977803|145978096 hsa-miR-3125 1 0 0
chr1:145977803|145978096 hsa-miR-3132 1 0 0
chr1:145977803|145978096 hsa-miR-3154 1 0 0
chr1:145977803|145978096 hsa-miR-4308 0 1 0
chr1:145977803|145978096 hsa-miR-4313 0 1 0
chr1:145977803|145978096 hsa-miR-4261 1 0 0
chr1:145977803|145978096 hsa-miR-4271 1 0 0
chr1:145977803|145978096 hsa-miR-3916 1 0 0
chr1:145977803|145978096 hsa-miR-4428 1 0 0
chr1:145977803|145978096 hsa-miR-4468 1 0 0
chr1:145977803|145978096 hsa-miR-4476 1 0 0
chr1:145977803|145978096 hsa-miR-4496 1 1 0
chr1:145977803|145978096 hsa-miR-2392 1 0 0
chr1:145977803|145978096 hsa-miR-4510 1 0 0
chr1:145977803|145978096 hsa-miR-4516 1 0 0
chr1:145977803|145978096 hsa-miR-4533 1 0 0
chr1:145977803|145978096 hsa-miR-4534 1 0 0
chr1:145977803|145978096 hsa-miR-4641 0 1 0
chr1:145977803|145978096 hsa-miR-4644 1 0 0
chr1:145977803|145978096 hsa-miR-4656 1 0 0
chr1:145977803|145978096 hsa-miR-4658 1 0 0
chr1:145977803|145978096 hsa-miR-4682 0 1 0
chr1:145977803|145978096 hsa-miR-4689 1 0 0
chr1:145977803|145978096 hsa-miR-4706 1 0 0
chr1:145977803|145978096 hsa-miR-4710 0 1 0
chr1:145977803|145978096 hsa-miR-4739 1 0 0
chr1:145977803|145978096 hsa-miR-4779 1 1 0
chr1:145977803|145978096 hsa-miR-4784 1 0 0
chr1:145977803|145978096 hsa-miR-5703 1 1 0
chr1:145977803|145978096 hsa-miR-5739 1 0 0
chr1:145977803|145978096 hsa-miR-5787 1 0 0
chr1:145977803|145978096 hsa-miR-6088 1 0 0
chr1:145977803|145978096 hsa-miR-6124 1 0 0
chr1:145977803|145978096 hsa-miR-6127 1 0 0
chr1:145977803|145978096 hsa-miR-6129 1 0 0
chr1:145977803|145978096 hsa-miR-6130 1 0 0
chr1:145977803|145978096 hsa-miR-6133 1 0 0
chr1:145977803|145978096 hsa-miR-6165 1 0 0
chr1:145977803|145978096 hsa-miR-6745 1 0 0
chr1:145977803|145978096 hsa-miR-7515 1 0 0
chr1:145977803|145978096 hsa-miR-8060 1 0 0
chr1:145977803|145978096 hsa-miR-8085 1 0 0
chr1:145977803|145978096 hsa-miR-8089 1 0 0
chr1:145977803|145978096 hsa-miR-12114 1 0 0
chr1:145977803|145978096 hsa-miR-12118 1 1 0
chr1:145977803|145978096 hsa-miR-12120 1 0 0
chr1:145977803|145978096 hsa-miR-12124 1 0 0
chr1:145977803|145978096 hsa-miR-135a-3p 1 0 0
chr1:145977803|145978096 hsa-miR-6734-5p 1 1 0
chr1:145977803|145978096 hsa-miR-6809-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6765-5p 1 0 0
chr1:145977803|145978096 hsa-miR-3150a-3p 1 0 0
chr1:145977803|145978096 hsa-miR-7106-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6825-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6894-5p 1 1 0
chr1:145977803|145978096 hsa-miR-1233-3p 0 1 0
chr1:145977803|145978096 hsa-miR-766-5p 1 1 0
chr1:145977803|145978096 hsa-miR-6833-5p 1 0 0
chr1:145977803|145978096 hsa-miR-5187-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6515-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6757-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6873-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6880-5p 1 0 0
chr1:145977803|145978096 hsa-miR-7847-3p 1 1 0
chr1:145977803|145978096 hsa-miR-4695-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6746-5p 1 0 0
chr1:145977803|145978096 hsa-miR-4709-3p 1 0 0
chr1:145977803|145978096 hsa-miR-7154-3p 1 0 0
chr1:145977803|145978096 hsa-miR-197-5p 1 0 0
chr1:145977803|145978096 hsa-miR-874-3p 1 0 0
chr1:145977803|145978096 hsa-miR-3605-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6768-5p 1 0 0
chr1:145977803|145978096 hsa-miR-3180-3p 1 0 0
chr1:145977803|145978096 hsa-miR-6798-5p 1 0 0
chr1:145977803|145978096 hsa-miR-942-5p 0 1 0
chr1:145977803|145978096 hsa-miR-6760-5p 1 1 0
chr1:145977803|145978096 hsa-miR-6881-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6782-5p 1 0 0
chr1:145977803|145978096 hsa-miR-3667-5p 0 1 0
chr1:145977803|145978096 hsa-miR-3150b-3p 1 0 0
chr1:145977803|145978096 hsa-miR-5008-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6835-5p 1 0 0
chr1:145977803|145978096 hsa-miR-4738-3p 1 0 0
chr1:145977803|145978096 hsa-miR-3691-5p 1 0 0
chr1:145977803|145978096 hsa-miR-4764-5p 1 0 0
chr1:145977803|145978096 hsa-miR-877-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6847-5p 0 1 0
chr1:145977803|145978096 hsa-miR-3202 1 0 0
chr1:145977803|145978096 hsa-miR-6830-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6824-5p 1 0 0
chr1:145977803|145978096 hsa-miR-3162-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6828-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6878-5p 1 1 0
chr1:145977803|145978096 hsa-miR-5010-5p 1 0 0
chr1:145977803|145978096 hsa-miR-423-5p 1 0 0
chr1:145977803|145978096 hsa-miR-4724-5p 0 1 0
chr1:145977803|145978096 hsa-miR-660-3p 0 1 0
chr1:145977803|145978096 hsa-miR-483-5p 1 0 0
chr1:145977803|145978096 hsa-miR-5195-5p 0 1 0
chr1:145977803|145978096 hsa-miR-6779-3p 0 1 0
chr1:145977803|145978096 hsa-miR-6731-3p 0 1 0
chr1:145977803|145978096 hsa-miR-4763-3p 1 0 0
chr1:145977803|145978096 hsa-miR-6769b-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6812-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6870-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6737-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6754-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6819-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6851-5p 1 0 0
chr1:145977803|145978096 hsa-miR-11181-3p 1 1 0
chr1:145977803|145978096 hsa-miR-1249-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6763-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6788-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6797-5p 1 1 0
chr1:145977803|145978096 hsa-miR-6875-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6879-5p 1 0 0
chr1:145977803|145978096 hsa-miR-7111-5p 1 0 0
chr1:145977803|145978096 hsa-miR-4755-5p 0 1 0
chr1:145977803|145978096 hsa-miR-5196-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6780b-5p 1 0 0
chr1:145977803|145978096 hsa-miR-10526-3p 1 0 0
chr1:145977803|145978096 hsa-miR-4649-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6735-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6738-5p 1 0 0
chr1:145977803|145978096 hsa-miR-675-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6794-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6846-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6858-5p 1 1 0
chr1:145977803|145978096 hsa-miR-4436b-3p 1 0 0
chr1:145977803|145978096 hsa-miR-6831-5p 1 1 0
chr1:145977803|145978096 hsa-miR-4769-5p 1 0 0
chr1:145977803|145978096 hsa-miR-3198 1 0 0
chr1:145977803|145978096 hsa-miR-6731-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6739-5p 1 1 0
chr1:145977803|145978096 hsa-miR-6758-5p 1 1 0
chr1:145977803|145978096 hsa-miR-1199-5p 0 1 0
chr1:145977803|145978096 hsa-miR-3173-3p 1 0 0
chr1:145977803|145978096 hsa-miR-3679-5p 1 0 0
chr1:145977803|145978096 hsa-miR-4747-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6876-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6891-5p 1 1 0
chr1:145977803|145978096 hsa-miR-4716-3p 1 0 0
chr1:145977803|145978096 hsa-miR-4667-5p 1 0 0
chr1:145977803|145978096 hsa-miR-6791-5p 1 0 0
chr1:145977803|145978096 hsa-miR-1255b-5p 1 0 0
chr1:145977803|145978096 hsa-miR-548ao-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:145977803|145978096
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MFFFIILFFFLLFLLFFFFFLLILL
Nucleotide Sequence ATGTTCTTCTTCATCATACTCTTCTTCTTCCTCCTCTTCCTTCTCTTCTTCTTCTTCTTTCTCCTCATCCTCCTCTGA
CircID chr1:145977803|145978096
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MGQERGNGSRAQEVSMHTSSSPLVSVLFPPYLLWS
Nucleotide Sequence ATGGGCCAAGAGAGAGGGAATGGATCCAGGGCTCAGGAGGTCTCTATGCACACTTCCTCCTCACCTCTAGTTTCTGTATTGTTTCCTCCTTATCTTCTGTGGTCTTAG
CircID chr1:145977803|145978096
ORF Type ORF3
Protein Length 56
Nucleotide Length 171
Protein Sequence MKLLLLPSSPGSHVGMNRNRNSGSVHRREKLRHTWAKREGMDPGLRRSLCTLPPHL
Nucleotide Sequence CTGAAGTTACTTCTTCTTCCTTCTTCTCCAGGGTCTCATGTGGGGATGAATAGGAATAGAAACTCAGGTTCAGTTCACAGAAGGGAAAAATTGAGGCACACATGGGCCAAGAGAGAGGGAATGGATCCAGGGCTCAGGAGGTCTCTATGCACACTTCCTCCTCACCTCTAG
CircID chr1:145977803|145978096
ORF Type ORF4
Protein Length 70
Nucleotide Length 210
Protein Sequence MDPFPLSWPMCASIFPFCELNLSFYSYSSPHETLEKKEEEVTSEEDEEKEEEEEKEEEEEEEYDEEEHEE
Nucleotide Sequence CTGGATCCATTCCCTCTCTCTTGGCCCATGTGTGCCTCAATTTTTCCCTTCTGTGAACTGAACCTGAGTTTCTATTCCTATTCATCCCCACATGAGACCCTGGAGAAGAAGGAAGAAGAAGTAACTTCAGAGGAGGATGAGGAGAAAGAAGAAGAAGAAGAGAAGGAAGAGGAGGAAGAAGAAGAGTATGATGAAGAAGAACATGAAGAG
CircID chr1:145977803|145978096
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MKLLLLPSSPGSLVSVLFPPYLLWS
Nucleotide Sequence CTGAAGTTACTTCTTCTTCCTTCTTCTCCAGGGTCTCTAGTTTCTGTATTGTTTCCTCCTTATCTTCTGTGGTCTTAG
CircID chr1:145977803|145978096
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MEKKEEEVTSEEDEEKEEEEEKEEEEEEEYDEEEHEE
Nucleotide Sequence CTGGAGAAGAAGGAAGAAGAAGTAACTTCAGAGGAGGATGAGGAGAAAGAAGAAGAAGAAGAGAAGGAAGAGGAGGAAGAAGAAGAGTATGATGAAGAAGAACATGAAGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab