CircRNA Information

General Information
circRNA Basic Information
CircID chr1:145994281|145994597
Strand -
CircType exon
Host Gene ENSG00000265972.4;
Algorism CIRI2;
Sequence CTTCTGGGGTATCAGGGATGTTCAGATCTACCCAACTCATCTCAGAGCTGGTTCGGCTGGCCATGCTGGATGTTCTGCTGCTTAGACCTGATCTGCTGCCAATTACCAGGGGCAGGTCAAGGATGACCTTCTTGGATCCAGGAACGCTAACATAGATCTAGAAAGGAAGATGGCAGTTTATTACACCAGAGGTCTGGAGAAACAAGACAGCTGTGGTAACAGATGAACAATTTCTCTGCTGAAGCCACCCTGCATCTACCCACCAGTAAGGAATATTCAACTCGAAGGATGTTGCAGCCCAGGATAGAAGGCCTGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:145994281|145994597 hsa-miR-15a-5p 0 0 1
chr1:145994281|145994597 hsa-miR-15a-3p 0 0 1
chr1:145994281|145994597 hsa-miR-192-5p 0 0 1
chr1:145994281|145994597 hsa-miR-192-3p 0 0 1
chr1:145994281|145994597 hsa-miR-214-5p 0 0 1
chr1:145994281|145994597 hsa-miR-214-3p 0 0 1
chr1:145994281|145994597 hsa-miR-215-5p 0 0 1
chr1:145994281|145994597 hsa-miR-215-3p 0 0 1
chr1:145994281|145994597 hsa-miR-15b-5p 0 0 1
chr1:145994281|145994597 hsa-miR-15b-3p 0 0 1
chr1:145994281|145994597 hsa-miR-143-5p 0 0 1
chr1:145994281|145994597 hsa-miR-143-3p 0 0 1
chr1:145994281|145994597 hsa-miR-195-5p 0 0 1
chr1:145994281|145994597 hsa-miR-195-3p 0 0 1
chr1:145994281|145994597 hsa-miR-424-5p 0 0 1
chr1:145994281|145994597 hsa-miR-424-3p 0 0 1
chr1:145994281|145994597 hsa-miR-431-5p 0 0 1
chr1:145994281|145994597 hsa-miR-431-3p 0 0 1
chr1:145994281|145994597 hsa-miR-493-5p 0 0 1
chr1:145994281|145994597 hsa-miR-493-3p 0 0 1
chr1:145994281|145994597 hsa-miR-497-5p 0 0 1
chr1:145994281|145994597 hsa-miR-497-3p 0 0 1
chr1:145994281|145994597 hsa-miR-539-5p 0 0 1
chr1:145994281|145994597 hsa-miR-539-3p 0 0 1
chr1:145994281|145994597 hsa-miR-571 0 1 1
chr1:145994281|145994597 hsa-miR-626 0 0 1
chr1:145994281|145994597 hsa-miR-631 0 0 1
chr1:145994281|145994597 hsa-miR-766-5p 0 0 1
chr1:145994281|145994597 hsa-miR-766-3p 0 0 1
chr1:145994281|145994597 hsa-miR-541-5p 0 0 1
chr1:145994281|145994597 hsa-miR-541-3p 0 0 1
chr1:145994281|145994597 hsa-miR-922 0 1 1
chr1:145994281|145994597 hsa-miR-1206 0 0 1
chr1:145994281|145994597 hsa-miR-548g-5p 0 0 1
chr1:145994281|145994597 hsa-miR-548g-3p 0 0 1
chr1:145994281|145994597 hsa-miR-885-3p 0 0 1
chr1:145994281|145994597 hsa-miR-1225-5p 0 0 1
chr1:145994281|145994597 hsa-miR-654-5p 0 0 1
chr1:145994281|145994597 hsa-miR-331-3p 0 0 1
chr1:145994281|145994597 hsa-miR-140-3p 0 0 1
chr1:145994281|145994597 hsa-miR-338-3p 0 0 1
chr1:145994281|145994597 hsa-miR-324-3p 0 0 1
chr1:145994281|145994597 hsa-miR-518d-5p 0 0 1
chr1:145994281|145994597 hsa-miR-519b-5p 0 0 1
chr1:145994281|145994597 hsa-miR-519c-5p 0 0 1
chr1:145994281|145994597 hsa-miR-520c-5p 0 0 1
chr1:145994281|145994597 hsa-miR-125a-5p 0 0 1
chr1:145994281|145994597 hsa-miR-362-5p 0 1 1
chr1:145994281|145994597 hsa-miR-515-5p 0 0 1
chr1:145994281|145994597 hsa-miR-125b 0 0 1
chr1:145994281|145994597 hsa-miR-16 0 0 1
chr1:145994281|145994597 hsa-miR-526a 0 0 1
chr1:145994281|145994597 hsa-miR-219-1-3p 0 0 1
chr1:145994281|145994597 hsa-miR-608 1 0 0
chr1:145994281|145994597 hsa-miR-661 1 0 0
chr1:145994281|145994597 hsa-miR-3132 1 1 0
chr1:145994281|145994597 hsa-miR-3165 0 1 0
chr1:145994281|145994597 hsa-miR-4277 0 1 0
chr1:145994281|145994597 hsa-miR-3665 1 0 0
chr1:145994281|145994597 hsa-miR-6088 1 1 0
chr1:145994281|145994597 hsa-miR-7978 0 1 0
chr1:145994281|145994597 hsa-miR-8075 1 0 0
chr1:145994281|145994597 hsa-miR-11399 1 1 0
chr1:145994281|145994597 hsa-miR-12119 1 1 0
chr1:145994281|145994597 hsa-miR-138-5p 0 1 0
chr1:145994281|145994597 hsa-miR-154-5p 0 1 0
chr1:145994281|145994597 hsa-miR-6861-5p 1 0 0
chr1:145994281|145994597 hsa-miR-6825-5p 1 0 0
chr1:145994281|145994597 hsa-miR-219a-1-3p 1 0 0
chr1:145994281|145994597 hsa-miR-6875-3p 1 0 0
chr1:145994281|145994597 hsa-miR-197-5p 1 1 0
chr1:145994281|145994597 hsa-miR-6793-5p 1 0 0
chr1:145994281|145994597 hsa-miR-3194-5p 0 1 0
chr1:145994281|145994597 hsa-miR-6821-5p 1 0 0
chr1:145994281|145994597 hsa-miR-6835-5p 1 0 0
chr1:145994281|145994597 hsa-miR-1229-5p 1 1 0
chr1:145994281|145994597 hsa-miR-296-3p 1 0 0
chr1:145994281|145994597 hsa-miR-6501-5p 1 1 0
chr1:145994281|145994597 hsa-miR-6802-5p 1 0 0
chr1:145994281|145994597 hsa-miR-4715-5p 0 1 0
chr1:145994281|145994597 hsa-miR-3944-5p 1 0 0
chr1:145994281|145994597 hsa-miR-1288-5p 0 1 0
chr1:145994281|145994597 hsa-miR-5088-3p 0 1 0
chr1:145994281|145994597 hsa-miR-4772-5p 0 1 0
chr1:145994281|145994597 hsa-miR-1233-5p 1 0 0
chr1:145994281|145994597 hsa-miR-4763-3p 1 0 0
chr1:145994281|145994597 hsa-miR-6769b-5p 1 1 0
chr1:145994281|145994597 hsa-miR-6778-5p 1 0 0
chr1:145994281|145994597 hsa-miR-6769a-5p 1 1 0
chr1:145994281|145994597 hsa-miR-6836-5p 1 0 0
chr1:145994281|145994597 hsa-miR-6783-3p 0 1 0
chr1:145994281|145994597 hsa-miR-4691-5p 1 0 0
chr1:145994281|145994597 hsa-miR-6876-3p 0 1 0
chr1:145994281|145994597 hsa-miR-3619-5p 1 0 0
chr1:145994281|145994597 hsa-miR-10397-5p 0 1 0
chr1:145994281|145994597 hsa-miR-4769-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:145994281|145994597
ORF Type ORF1
Protein Length 40
Nucleotide Length 123
Protein Sequence MGYQGCSDLPNSSQSWFGWPCWMFCCLDLICCQLPGAGQG
Nucleotide Sequence CTGGGGTATCAGGGATGTTCAGATCTACCCAACTCATCTCAGAGCTGGTTCGGCTGGCCATGCTGGATGTTCTGCTGCTTAGACCTGATCTGCTGCCAATTACCAGGGGCAGGTCAAGGATGA

CircID chr1:145994281|145994597
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MNNFSAEATLHLPTSKEYSTRRMLQPRIEGL
Nucleotide Sequence ATGAACAATTTCTCTGCTGAAGCCACCCTGCATCTACCCACCAGTAAGGAATATTCAACTCGAAGGATGTTGCAGCCCAGGATAGAAGGCCTG

CircID chr1:145994281|145994597
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MFRSTQLISELVRLAMLDVLLLRPDLLPITRGRSRMTFLDPGTLT
Nucleotide Sequence ATGTTCAGATCTACCCAACTCATCTCAGAGCTGGTTCGGCTGGCCATGCTGGATGTTCTGCTGCTTAGACCTGATCTGCTGCCAATTACCAGGGGCAGGTCAAGGATGACCTTCTTGGATCCAGGAACGCTAACATAG

CircID chr1:145994281|145994597
ORF Type ORF4
Protein Length 51
Nucleotide Length 156
Protein Sequence MGCNILRVEYSLLVGRCRVASAEKLFICYHSCLVSPDLWCNKLPSSFLDLC
Nucleotide Sequence CTGGGCTGCAACATCCTTCGAGTTGAATATTCCTTACTGGTGGGTAGATGCAGGGTGGCTTCAGCAGAGAAATTGTTCATCTGTTACCACAGCTGTCTTGTTTCTCCAGACCTCTGGTGTAATAAACTGCCATCTTCCTTTCTAGATCTATGTTAG

CircID chr1:145994281|145994597
ORF Type ORF5
Protein Length 40
Nucleotide Length 123
Protein Sequence MNIPYWWVDAGWLQQRNCSSVTTAVLFLQTSGVINCHLPF
Nucleotide Sequence TTGAATATTCCTTACTGGTGGGTAGATGCAGGGTGGCTTCAGCAGAGAAATTGTTCATCTGTTACCACAGCTGTCTTGTTTCTCCAGACCTCTGGTGTAATAAACTGCCATCTTCCTTTCTAG

CircID chr1:145994281|145994597
ORF Type ORF6
Protein Length 38
Nucleotide Length 114
Protein Sequence MPLVIGSRSGLSSRTSSMASRTSSEMSWVDLNIPDTPE
Nucleotide Sequence CTGCCCCTGGTAATTGGCAGCAGATCAGGTCTAAGCAGCAGAACATCCAGCATGGCCAGCCGAACCAGCTCTGAGATGAGTTGGGTAGATCTGAACATCCCTGATACCCCAGAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites