CircRNA Information

General Information
circRNA Basic Information
CircID chr1:145994368|145994641
Strand -
CircType exon
Host Gene ENSG00000265972.4;
Algorism CIRI2;
Sequence CTGATCTGCTGCCAATTACCAGGGGCAGGTCAAGGATGACCTTCTTGGATCCAGGAACGCTAACATAGATCTAGAAAGGAAGATGGCAGTTTATTACACCAGAGGTCTGGAGAAACAAGACAGCTGTGGTAACAGATGAACAATTTCTCTGCTGAAGCCACCCTGCATCTACCCACCAGTAAGGAATATTCAACTCGAAGGATGTTGCAGCCCAGGATAGAAGGCCTGATCTTCTGAACCCGAAGGCTCTTGCCACGCCATGATGCGCATGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:145994368|145994641 hsa-miR-31-5p 0 0 1
chr1:145994368|145994641 hsa-miR-31-3p 0 0 1
chr1:145994368|145994641 hsa-miR-192-5p 0 0 1
chr1:145994368|145994641 hsa-miR-192-3p 0 0 1
chr1:145994368|145994641 hsa-miR-214-5p 0 0 1
chr1:145994368|145994641 hsa-miR-214-3p 0 0 1
chr1:145994368|145994641 hsa-miR-215-5p 0 0 1
chr1:145994368|145994641 hsa-miR-215-3p 0 0 1
chr1:145994368|145994641 hsa-miR-335-5p 0 0 1
chr1:145994368|145994641 hsa-miR-335-3p 0 0 1
chr1:145994368|145994641 hsa-miR-431-5p 0 0 1
chr1:145994368|145994641 hsa-miR-431-3p 0 0 1
chr1:145994368|145994641 hsa-miR-493-5p 0 0 1
chr1:145994368|145994641 hsa-miR-493-3p 0 0 1
chr1:145994368|145994641 hsa-miR-539-5p 0 0 1
chr1:145994368|145994641 hsa-miR-539-3p 0 0 1
chr1:145994368|145994641 hsa-miR-626 0 0 1
chr1:145994368|145994641 hsa-miR-631 0 0 1
chr1:145994368|145994641 hsa-miR-766-5p 0 0 1
chr1:145994368|145994641 hsa-miR-766-3p 0 0 1
chr1:145994368|145994641 hsa-miR-541-5p 0 0 1
chr1:145994368|145994641 hsa-miR-541-3p 0 0 1
chr1:145994368|145994641 hsa-miR-922 0 0 1
chr1:145994368|145994641 hsa-miR-1206 0 0 1
chr1:145994368|145994641 hsa-miR-548g-5p 0 0 1
chr1:145994368|145994641 hsa-miR-548g-3p 0 0 1
chr1:145994368|145994641 hsa-miR-885-3p 0 0 1
chr1:145994368|145994641 hsa-miR-654-5p 0 0 1
chr1:145994368|145994641 hsa-miR-331-3p 0 0 1
chr1:145994368|145994641 hsa-miR-140-3p 0 0 1
chr1:145994368|145994641 hsa-miR-324-3p 0 0 1
chr1:145994368|145994641 hsa-miR-518d-5p 0 0 1
chr1:145994368|145994641 hsa-miR-519b-5p 0 0 1
chr1:145994368|145994641 hsa-miR-519c-5p 0 0 1
chr1:145994368|145994641 hsa-miR-520c-5p 0 0 1
chr1:145994368|145994641 hsa-miR-362-5p 0 0 1
chr1:145994368|145994641 hsa-miR-515-5p 0 0 1
chr1:145994368|145994641 hsa-miR-526a 0 0 1
chr1:145994368|145994641 hsa-miR-219-1-3p 0 0 1
chr1:145994368|145994641 hsa-miR-608 1 0 0
chr1:145994368|145994641 hsa-miR-661 1 0 0
chr1:145994368|145994641 hsa-miR-3132 1 0 0
chr1:145994368|145994641 hsa-miR-4302 1 0 0
chr1:145994368|145994641 hsa-miR-3665 1 0 0
chr1:145994368|145994641 hsa-miR-4706 1 0 0
chr1:145994368|145994641 hsa-miR-6088 1 0 0
chr1:145994368|145994641 hsa-miR-8075 1 0 0
chr1:145994368|145994641 hsa-miR-125b-1-3p 1 0 0
chr1:145994368|145994641 hsa-miR-6861-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6825-5p 1 0 0
chr1:145994368|145994641 hsa-miR-197-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6793-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6821-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6835-5p 1 0 0
chr1:145994368|145994641 hsa-miR-1229-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6501-5p 1 0 0
chr1:145994368|145994641 hsa-miR-1233-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6769b-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6778-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6754-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6769a-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6842-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6836-5p 1 0 0
chr1:145994368|145994641 hsa-miR-10396b-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6766-5p 1 0 0
chr1:145994368|145994641 hsa-miR-6791-5p 1 0 0
chr1:145994368|145994641 hsa-miR-4691-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:145994368|145994641
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MNNFSAEATLHLPTSKEYSTRRMLQPRIEGLIF
Nucleotide Sequence ATGAACAATTTCTCTGCTGAAGCCACCCTGCATCTACCCACCAGTAAGGAATATTCAACTCGAAGGATGTTGCAGCCCAGGATAGAAGGCCTGATCTTCTGA

CircID chr1:145994368|145994641
ORF Type ORF2
Protein Length 40
Nucleotide Length 123
Protein Sequence MNIPYWWVDAGWLQQRNCSSVTTAVLFLQTSGVINCHLPF
Nucleotide Sequence TTGAATATTCCTTACTGGTGGGTAGATGCAGGGTGGCTTCAGCAGAGAAATTGTTCATCTGTTACCACAGCTGTCTTGTTTCTCCAGACCTCTGGTGTAATAAACTGCCATCTTCCTTTCTAG

CircID chr1:145994368|145994641
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MRIMAWQEPSGSEDQAFYPGLQHPSS
Nucleotide Sequence ATGCGCATCATGGCGTGGCAAGAGCCTTCGGGTTCAGAAGATCAGGCCTTCTATCCTGGGCTGCAACATCCTTCGAGTTGA

CircID chr1:145994368|145994641
ORF Type ORF4
Protein Length 51
Nucleotide Length 156
Protein Sequence MGCNILRVEYSLLVGRCRVASAEKLFICYHSCLVSPDLWCNKLPSSFLDLC
Nucleotide Sequence CTGGGCTGCAACATCCTTCGAGTTGAATATTCCTTACTGGTGGGTAGATGCAGGGTGGCTTCAGCAGAGAAATTGTTCATCTGTTACCACAGCTGTCTTGTTTCTCCAGACCTCTGGTGTAATAAACTGCCATCTTCCTTTCTAGATCTATGTTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites