CircRNA Information

General Information
circRNA Basic Information
CircID chr1:145995171|145995291
Strand -
CircType exon
Host Gene ENSG00000265972.4;
Algorism CIRI2;
Sequence CAGATCCACTACTTCAAAGTTTTTCTTTGTCTCTTGAGTTGGCTGGCTCGGGCGGTCAAGAAAAGCCTTCACCCAGTAGTCTACACACCCATATTTTCCTTTGAAGGATGTTCCCAGAGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:145995171|145995291 hsa-miR-205-5p 0 0 1
chr1:145995171|145995291 hsa-miR-205-3p 0 0 1
chr1:145995171|145995291 hsa-miR-326 0 1 1
chr1:145995171|145995291 hsa-miR-335-5p 0 0 1
chr1:145995171|145995291 hsa-miR-335-3p 0 0 1
chr1:145995171|145995291 hsa-miR-526b-5p 0 0 1
chr1:145995171|145995291 hsa-miR-526b-3p 0 0 1
chr1:145995171|145995291 hsa-miR-573 0 0 1
chr1:145995171|145995291 hsa-miR-578 0 0 1
chr1:145995171|145995291 hsa-miR-609 0 0 1
chr1:145995171|145995291 hsa-miR-1262 0 0 1
chr1:145995171|145995291 hsa-miR-1292-5p 0 0 1
chr1:145995171|145995291 hsa-miR-1292-3p 0 0 1
chr1:145995171|145995291 hsa-miR-615-3p 0 0 1
chr1:145995171|145995291 hsa-miR-330-5p 0 0 1
chr1:145995171|145995291 hsa-miR-3911 1 0 0
chr1:145995171|145995291 hsa-miR-3916 0 1 0
chr1:145995171|145995291 hsa-miR-6078 0 1 0
chr1:145995171|145995291 hsa-miR-6867-5p 1 0 0
chr1:145995171|145995291 hsa-miR-6741-5p 1 0 0
chr1:145995171|145995291 hsa-miR-6748-5p 1 0 0
chr1:145995171|145995291 hsa-miR-6772-5p 1 0 0
chr1:145995171|145995291 hsa-miR-3194-5p 0 1 0
chr1:145995171|145995291 hsa-miR-6858-3p 0 1 0
chr1:145995171|145995291 hsa-miR-6847-5p 1 1 0
chr1:145995171|145995291 hsa-miR-3664-3p 0 1 0
chr1:145995171|145995291 hsa-miR-6769b-5p 1 0 0
chr1:145995171|145995291 hsa-miR-6752-5p 1 0 0
chr1:145995171|145995291 hsa-miR-6803-5p 1 0 0
chr1:145995171|145995291 hsa-miR-4701-3p 1 0 0
chr1:145995171|145995291 hsa-miR-6729-5p 1 0 0
chr1:145995171|145995291 hsa-miR-6736-5p 0 1 0
chr1:145995171|145995291 hsa-miR-6750-5p 1 0 0
chr1:145995171|145995291 hsa-miR-450a-1-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr1:145995171|145995291
ORF Type ORF1
Protein Length 29
Nucleotide Length 87
Protein Sequence MSWLARAVKKSLHPVVYTPIFSFEGCSQR
Nucleotide Sequence TTGAGTTGGCTGGCTCGGGCGGTCAAGAAAAGCCTTCACCCAGTAGTCTACACACCCATATTTTCCTTTGAAGGATGTTCCCAGAGG

CircID chr1:145995171|145995291
ORF Type ORF2
Protein Length 25
Nucleotide Length 78
Protein Sequence MSLELAGSGGQEKPSPSSLHTHIFL
Nucleotide Sequence TTGTCTCTTGAGTTGGCTGGCTCGGGCGGTCAAGAAAAGCCTTCACCCAGTAGTCTACACACCCATATTTTCCTTTGA

CircID chr1:145995171|145995291
ORF Type ORF3
Protein Length 39
Nucleotide Length 117
Protein Sequence MGTSFKGKYGCVDYWVKAFLDRPSQPTQETKKNFEVVDL
Nucleotide Sequence CTGGGAACATCCTTCAAAGGAAAATATGGGTGTGTAGACTACTGGGTGAAGGCTTTTCTTGACCGCCCGAGCCAGCCAACTCAAGAGACAAAGAAAAACTTTGAAGTAGTGGATCTG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites