CircNet

General Information

circRNA Basic Information

CircID	chr1:150460060\|150460317
Strand	+
CircType	exon
Host Gene	ENSG00000163125.15;
Algorism	find_circ;CIRI2;DCC;
Sequence	TCGAGGACAGGAAGGAAAAACCTGCAGAGAAGTCAGCTGTATCCACTTCTGTACCTACAAAGCCAACAGAAAATATCTCAAAGGCCTCTTCATGTACCCCAGTGCCTGTGACCATGACAGCAACTCCACCTCTTCCAAAGCCTGTGAATACTTCTCTTTCCCCTTCCCCAGCATTGGCTTTGCCAAACCTGGCTAATGTGGATCTGGCAAAGATCAGTTCCATCCTTAGCAGTTTAACATCAGTCATGAAAAATACTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:150460060\|150460317
ORF Type	ORF1
Protein Length	82
Nucleotide Length	246
Protein Sequence	MTDVKLLRMELIFARSTLARFGKANAGEGEREVFTGFGRGGVAVMVTGTGVHEEAFEIFSVGFVGTEVDTADFSAGFSFLSS
Nucleotide Sequence	ATGACTGATGTTAAACTGCTAAGGATGGAACTGATCTTTGCCAGATCCACATTAGCCAGGTTTGGCAAAGCCAATGCTGGGGAAGGGGAAAGAGAAGTATTCACAGGCTTTGGAAGAGGTGGAGTTGCTGTCATGGTCACAGGCACTGGGGTACATGAAGAGGCCTTTGAGATATTTTCTGTTGGCTTTGTAGGTACAGAAGTGGATACAGCTGACTTCTCTGCAGGTTTTTCCTTCCTGTCCTCG

CircID	chr1:150460060\|150460317
ORF Type	ORF2
Protein Length	48
Nucleotide Length	144
Protein Sequence	MTATPPLPKPVNTSLSPSPALALPNLANVDLAKISSILSSLTSVMKNT
Nucleotide Sequence	ATGACAGCAACTCCACCTCTTCCAAAGCCTGTGAATACTTCTCTTTCCCCTTCCCCAGCATTGGCTTTGCCAAACCTGGCTAATGTGGATCTGGCAAAGATCAGTTCCATCCTTAGCAGTTTAACATCAGTCATGAAAAATACT

CircID	chr1:150460060\|150460317
ORF Type	ORF3
Protein Length	40
Nucleotide Length	120
Protein Sequence	MLGKGKEKYSQALEEVELLSWSQALGYMKRPLRYFLLAL*
Nucleotide Sequence	ATGCTGGGGAAGGGGAAAGAGAAGTATTCACAGGCTTTGGAAGAGGTGGAGTTGCTGTCATGGTCACAGGCACTGGGGTACATGAAGAGGCCTTTGAGATATTTTCTGTTGGCTTTGTAG

CircID	chr1:150460060\|150460317
ORF Type	ORF4
Protein Length	35
Nucleotide Length	105
Protein Sequence	MYPSACDHDSNSTSSKACEYFSFPFPSIGFAKPG*
Nucleotide Sequence	ATGTACCCCAGTGCCTGTGACCATGACAGCAACTCCACCTCTTCCAAAGCCTGTGAATACTTCTCTTTCCCCTTCCCCAGCATTGGCTTTGCCAAACCTGGCTAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:150460060\|150460317	KHSRP	0	2	0
chr1:150460060\|150460317	ELAVL1	0	1	1
chr1:150460060\|150460317	PRPF8	0	1	0
chr1:150460060\|150460317	NOP58	0	1	2
chr1:150460060\|150460317	ADAR	1	0	0
chr1:150460060\|150460317	U2AF2	9	0	2
chr1:150460060\|150460317	NOP56	0	1	0
chr1:150460060\|150460317	DDX54	0	0	4
chr1:150460060\|150460317	RBM10	1	0	0
chr1:150460060\|150460317	PCBP2	0	0	1
chr1:150460060\|150460317	SF3A3	1	0	0
chr1:150460060\|150460317	FIP1L1	1	0	1
chr1:150460060\|150460317	PTBP1	0	1	2
chr1:150460060\|150460317	HNRNPC	8	7	0
chr1:150460060\|150460317	TRA2A	0	0	1
chr1:150460060\|150460317	HNRNPA1	3	2	0
chr1:150460060\|150460317	MSI2	1	0	1
chr1:150460060\|150460317	ACIN1	1	0	1
chr1:150460060\|150460317	IGF2BP1	0	0	5
chr1:150460060\|150460317	IGF2BP3	0	0	2
chr1:150460060\|150460317	IGF2BP2	0	2	4
chr1:150460060\|150460317	TARDBP	1	0	0
chr1:150460060\|150460317	YTHDC1	0	0	1
chr1:150460060\|150460317	BUD13	1	1	1
chr1:150460060\|150460317	CSTF2T	2	0	1
chr1:150460060\|150460317	CSTF2	3	2	0
chr1:150460060\|150460317	HNRNPK	0	0	1
chr1:150460060\|150460317	FBL	1	1	1
chr1:150460060\|150460317	EIF4A3	4	0	4
chr1:150460060\|150460317	AGO2	0	1	2

CircRNA Information