CircRNA Information

General Information
circRNA Basic Information
CircID chr1:150471493|150471663
Strand -
CircType exon
Host Gene ENSG00000163125.14;
Algorism CIRI2;
Sequence CTAGAGAAGAAACCAGCCAAATCTATCCTGAAATCAAGCAAGCTGTCTGATACCACCGAGTACCAGCCAATTCTGTCCAGTTATAGCCACAGAGCCCAAGAATTTGGGGTAAAGTCTGCCTTCCCTCCATCTGTAAGGGCCCTCCTGGACTCTAGTGAGAACTGTGACCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:150471493|150471663 hsa-miR-27a-5p 0 0 1
chr1:150471493|150471663 hsa-miR-27a-3p 0 0 1
chr1:150471493|150471663 hsa-miR-27b-5p 0 0 1
chr1:150471493|150471663 hsa-miR-27b-3p 0 0 1
chr1:150471493|150471663 hsa-miR-600 0 0 1
chr1:150471493|150471663 hsa-miR-635 0 1 1
chr1:150471493|150471663 hsa-miR-647 0 0 1
chr1:150471493|150471663 hsa-miR-665 1 0 1
chr1:150471493|150471663 hsa-miR-760 0 1 1
chr1:150471493|150471663 hsa-miR-938 0 1 1
chr1:150471493|150471663 hsa-miR-942-5p 0 0 1
chr1:150471493|150471663 hsa-miR-942-3p 0 0 1
chr1:150471493|150471663 hsa-miR-1229-5p 0 0 1
chr1:150471493|150471663 hsa-miR-1229-3p 0 0 1
chr1:150471493|150471663 hsa-miR-1251-5p 0 0 1
chr1:150471493|150471663 hsa-miR-1251-3p 0 0 1
chr1:150471493|150471663 hsa-miR-1324 0 0 1
chr1:150471493|150471663 hsa-miR-361-5p 0 0 1
chr1:150471493|150471663 hsa-miR-582-3p 0 0 1
chr1:150471493|150471663 hsa-miR-128 0 0 1
chr1:150471493|150471663 hsa-miR-3714 0 1 0
chr1:150471493|150471663 hsa-miR-378h 1 0 0
chr1:150471493|150471663 hsa-miR-4505 1 0 0
chr1:150471493|150471663 hsa-miR-4507 1 0 0
chr1:150471493|150471663 hsa-miR-4534 0 1 0
chr1:150471493|150471663 hsa-miR-1587 1 0 0
chr1:150471493|150471663 hsa-miR-5090 1 0 0
chr1:150471493|150471663 hsa-miR-5787 1 0 0
chr1:150471493|150471663 hsa-miR-6860 1 0 0
chr1:150471493|150471663 hsa-miR-8082 0 1 0
chr1:150471493|150471663 hsa-miR-138-5p 1 1 0
chr1:150471493|150471663 hsa-miR-92a-1-5p 1 0 0
chr1:150471493|150471663 hsa-miR-6861-5p 1 0 0
chr1:150471493|150471663 hsa-miR-6515-5p 0 1 0
chr1:150471493|150471663 hsa-miR-6880-5p 1 1 0
chr1:150471493|150471663 hsa-miR-4722-5p 1 1 0
chr1:150471493|150471663 hsa-miR-6842-3p 1 1 0
chr1:150471493|150471663 hsa-miR-197-5p 1 0 0
chr1:150471493|150471663 hsa-miR-6793-5p 1 0 0
chr1:150471493|150471663 hsa-miR-5088-5p 1 1 0
chr1:150471493|150471663 hsa-miR-149-3p 1 0 0
chr1:150471493|150471663 hsa-miR-7850-5p 1 0 0
chr1:150471493|150471663 hsa-miR-4771 0 1 0
chr1:150471493|150471663 hsa-miR-4520-3p 0 1 0
chr1:150471493|150471663 hsa-miR-1249-5p 1 1 0
chr1:150471493|150471663 hsa-miR-6797-5p 1 1 0
chr1:150471493|150471663 hsa-miR-3620-5p 1 0 0
chr1:150471493|150471663 hsa-miR-6836-5p 1 0 0
chr1:150471493|150471663 hsa-miR-328-5p 1 0 0
chr1:150471493|150471663 hsa-miR-6887-5p 1 0 0
chr1:150471493|150471663 hsa-miR-3187-5p 1 1 0
chr1:150471493|150471663 hsa-miR-4747-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:150471493|150471663
ORF Type ORF1
Protein Length 48
Nucleotide Length 144
Protein Sequence MKSSKLSDTTEYQPILSSYSHRAQEFGVKSAFPPSVRALLDSSENCDR
Nucleotide Sequence CTGAAATCAAGCAAGCTGTCTGATACCACCGAGTACCAGCCAATTCTGTCCAGTTATAGCCACAGAGCCCAAGAATTTGGGGTAAAGTCTGCCTTCCCTCCATCTGTAAGGGCCCTCCTGGACTCTAGTGAGAACTGTGACCGT

CircID chr1:150471493|150471663
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MDRIGWYSVVSDSLLDFRIDLAGFFS
Nucleotide Sequence CTGGACAGAATTGGCTGGTACTCGGTGGTATCAGACAGCTTGCTTGATTTCAGGATAGATTTGGCTGGTTTCTTCTCT

CircID chr1:150471493|150471663
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MEGRQTLPQILGLCGYNWTELAGTRWYQTACLISG
Nucleotide Sequence ATGGAGGGAAGGCAGACTTTACCCCAAATTCTTGGGCTCTGTGGCTATAACTGGACAGAATTGGCTGGTACTCGGTGGTATCAGACAGCTTGCTTGATTTCAGGATAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites