CircRNA Information

General Information
circRNA Basic Information
CircID chr1:150965545|150965722
Strand +
CircType exon
Host Gene ENSG00000143418.18;
Algorism CIRI2;
Sequence CAAGGCTAACCTTTCTAAGCTCCCTAACTTGGGCCAGAAACCAAAGCTGAGCTTTTAACTTTCTCCCTCTATGACACAAATGAATTGAGGGTAGGAGGAGGGTGCACATAACCCTTACCCTACCTCTGCCAAAAAGTGGGGGCTGTACTGGGGACTGCTCGGATGATCTTTCTTAGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:150965545|150965722 hsa-let-7b-5p 0 0 1
chr1:150965545|150965722 hsa-let-7b-3p 0 0 1
chr1:150965545|150965722 hsa-let-7c-5p 0 0 1
chr1:150965545|150965722 hsa-let-7c-3p 0 0 1
chr1:150965545|150965722 hsa-let-7d-5p 0 0 1
chr1:150965545|150965722 hsa-let-7d-3p 0 0 1
chr1:150965545|150965722 hsa-let-7e-5p 0 0 1
chr1:150965545|150965722 hsa-let-7e-3p 0 0 1
chr1:150965545|150965722 hsa-miR-96-5p 0 0 1
chr1:150965545|150965722 hsa-miR-96-3p 0 0 1
chr1:150965545|150965722 hsa-miR-98-5p 0 0 1
chr1:150965545|150965722 hsa-miR-98-3p 0 0 1
chr1:150965545|150965722 hsa-miR-182-5p 0 0 1
chr1:150965545|150965722 hsa-miR-182-3p 0 0 1
chr1:150965545|150965722 hsa-let-7g-5p 0 0 1
chr1:150965545|150965722 hsa-let-7g-3p 0 0 1
chr1:150965545|150965722 hsa-let-7i-5p 0 0 1
chr1:150965545|150965722 hsa-let-7i-3p 0 0 1
chr1:150965545|150965722 hsa-miR-376b-5p 0 0 1
chr1:150965545|150965722 hsa-miR-376b-3p 0 0 1
chr1:150965545|150965722 hsa-miR-555 0 0 1
chr1:150965545|150965722 hsa-miR-579-5p 0 0 1
chr1:150965545|150965722 hsa-miR-579-3p 0 0 1
chr1:150965545|150965722 hsa-miR-592 0 0 1
chr1:150965545|150965722 hsa-miR-597-5p 0 0 1
chr1:150965545|150965722 hsa-miR-597-3p 0 0 1
chr1:150965545|150965722 hsa-miR-599 0 0 1
chr1:150965545|150965722 hsa-miR-659-5p 0 0 1
chr1:150965545|150965722 hsa-miR-659-3p 0 0 1
chr1:150965545|150965722 hsa-miR-1271-5p 0 0 1
chr1:150965545|150965722 hsa-miR-1271-3p 0 0 1
chr1:150965545|150965722 hsa-miR-920 0 1 1
chr1:150965545|150965722 hsa-miR-1321 0 0 1
chr1:150965545|150965722 hsa-miR-770-5p 0 0 1
chr1:150965545|150965722 hsa-miR-615-3p 0 0 1
chr1:150965545|150965722 hsa-miR-455-5p 0 0 1
chr1:150965545|150965722 hsa-miR-9 0 0 1
chr1:150965545|150965722 hsa-miR-664 0 0 1
chr1:150965545|150965722 hsa-let-7a 0 0 1
chr1:150965545|150965722 hsa-let-7f 0 0 1
chr1:150965545|150965722 hsa-miR-376a 0 0 1
chr1:150965545|150965722 hsa-miR-3154 1 0 0
chr1:150965545|150965722 hsa-miR-4257 0 1 0
chr1:150965545|150965722 hsa-miR-4274 1 1 0
chr1:150965545|150965722 hsa-miR-3916 1 0 0
chr1:150965545|150965722 hsa-miR-3943 0 1 0
chr1:150965545|150965722 hsa-miR-4510 0 1 0
chr1:150965545|150965722 hsa-miR-4739 1 0 0
chr1:150965545|150965722 hsa-miR-4779 1 0 0
chr1:150965545|150965722 hsa-miR-5193 0 1 0
chr1:150965545|150965722 hsa-miR-5694 0 1 0
chr1:150965545|150965722 hsa-miR-6081 1 0 0
chr1:150965545|150965722 hsa-miR-6127 1 1 0
chr1:150965545|150965722 hsa-miR-6133 1 1 0
chr1:150965545|150965722 hsa-miR-6894-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6854-5p 0 1 0
chr1:150965545|150965722 hsa-miR-766-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6867-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6746-5p 1 0 0
chr1:150965545|150965722 hsa-miR-874-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6732-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6798-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6760-5p 1 1 0
chr1:150965545|150965722 hsa-miR-2467-3p 0 1 0
chr1:150965545|150965722 hsa-miR-6763-3p 1 0 0
chr1:150965545|150965722 hsa-miR-877-5p 1 0 0
chr1:150965545|150965722 hsa-miR-4667-3p 0 1 0
chr1:150965545|150965722 hsa-miR-3162-5p 1 1 0
chr1:150965545|150965722 hsa-miR-6878-5p 1 1 0
chr1:150965545|150965722 hsa-miR-7112-5p 1 0 0
chr1:150965545|150965722 hsa-miR-7848-3p 0 1 0
chr1:150965545|150965722 hsa-miR-2355-5p 0 1 0
chr1:150965545|150965722 hsa-miR-6865-3p 0 1 0
chr1:150965545|150965722 hsa-miR-6501-3p 1 0 0
chr1:150965545|150965722 hsa-miR-548at-5p 0 1 0
chr1:150965545|150965722 hsa-let-7a-2-3p 1 0 0
chr1:150965545|150965722 hsa-miR-1249-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6722-3p 0 1 0
chr1:150965545|150965722 hsa-miR-6797-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6875-5p 1 0 0
chr1:150965545|150965722 hsa-miR-7111-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6777-5p 1 0 0
chr1:150965545|150965722 hsa-miR-6848-5p 1 0 0
chr1:150965545|150965722 hsa-miR-4723-5p 1 0 0
chr1:150965545|150965722 hsa-miR-5591-5p 0 1 0
chr1:150965545|150965722 hsa-miR-3136-3p 0 1 0
chr1:150965545|150965722 hsa-miR-4712-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:150965545|150965722
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MCTLLLPSIHLCHRGRKLKAQLWFLAQVRELRKVSL
Nucleotide Sequence ATGTGCACCCTCCTCCTACCCTCAATTCATTTGTGTCATAGAGGGAGAAAGTTAAAAGCTCAGCTTTGGTTTCTGGCCCAAGTTAGGGAGCTTAGAAAGGTTAGCCTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab