CircRNA Information

General Information
circRNA Basic Information
CircID chr1:150997067|150997245
Strand -
CircType exon
Host Gene ENSG00000143409.14;
Algorism CIRI2;
Sequence CCACCAATCCTAGTGTTGCCCTGGATGGGAGGCAGAGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:150997067|150997245 hsa-miR-192-5p 0 0 1
chr1:150997067|150997245 hsa-miR-192-3p 0 0 1
chr1:150997067|150997245 hsa-miR-215-5p 0 0 1
chr1:150997067|150997245 hsa-miR-215-3p 0 0 1
chr1:150997067|150997245 hsa-miR-143-5p 0 0 1
chr1:150997067|150997245 hsa-miR-143-3p 0 0 1
chr1:150997067|150997245 hsa-miR-135b-5p 0 0 1
chr1:150997067|150997245 hsa-miR-135b-3p 0 0 1
chr1:150997067|150997245 hsa-miR-942-5p 0 0 1
chr1:150997067|150997245 hsa-miR-942-3p 0 0 1
chr1:150997067|150997245 hsa-miR-1287-5p 0 0 1
chr1:150997067|150997245 hsa-miR-1287-3p 0 0 1
chr1:150997067|150997245 hsa-miR-1255a 0 1 1
chr1:150997067|150997245 hsa-miR-1261 0 0 1
chr1:150997067|150997245 hsa-miR-1281 0 1 1
chr1:150997067|150997245 hsa-miR-1288-5p 0 0 1
chr1:150997067|150997245 hsa-miR-1288-3p 0 0 1
chr1:150997067|150997245 hsa-miR-509-3p 0 0 1
chr1:150997067|150997245 hsa-miR-576-3p 0 0 1
chr1:150997067|150997245 hsa-miR-125a-5p 0 0 1
chr1:150997067|150997245 hsa-miR-105 0 0 1
chr1:150997067|150997245 hsa-miR-125b 0 0 1
chr1:150997067|150997245 hsa-miR-1255b 0 0 1
chr1:150997067|150997245 hsa-miR-1269 0 0 1
chr1:150997067|150997245 hsa-miR-135a 0 0 1
chr1:150997067|150997245 hsa-miR-544b 1 0 0
chr1:150997067|150997245 hsa-miR-3135b 1 0 0
chr1:150997067|150997245 hsa-miR-1587 1 0 0
chr1:150997067|150997245 hsa-miR-6088 1 0 0
chr1:150997067|150997245 hsa-miR-105-5p 0 1 0
chr1:150997067|150997245 hsa-miR-6836-3p 0 1 0
chr1:150997067|150997245 hsa-miR-6861-5p 1 0 0
chr1:150997067|150997245 hsa-miR-6857-5p 0 1 0
chr1:150997067|150997245 hsa-miR-6799-5p 1 0 0
chr1:150997067|150997245 hsa-miR-6728-5p 1 0 0
chr1:150997067|150997245 hsa-miR-5187-5p 0 1 0
chr1:150997067|150997245 hsa-miR-5589-5p 1 0 0
chr1:150997067|150997245 hsa-miR-6882-3p 0 1 0
chr1:150997067|150997245 hsa-miR-6740-3p 0 1 0
chr1:150997067|150997245 hsa-miR-6763-3p 1 1 0
chr1:150997067|150997245 hsa-miR-6803-3p 0 1 0
chr1:150997067|150997245 hsa-miR-6753-5p 1 0 0
chr1:150997067|150997245 hsa-miR-5001-3p 0 1 0
chr1:150997067|150997245 hsa-miR-4695-3p 0 1 0
chr1:150997067|150997245 hsa-miR-345-5p 1 1 0
chr1:150997067|150997245 hsa-miR-6880-3p 1 1 0
chr1:150997067|150997245 hsa-miR-6761-5p 1 0 0
chr1:150997067|150997245 hsa-miR-6767-3p 0 1 0
chr1:150997067|150997245 hsa-miR-4704-5p 0 1 0
chr1:150997067|150997245 hsa-miR-2116-3p 0 1 0
chr1:150997067|150997245 hsa-miR-499b-5p 0 1 0
chr1:150997067|150997245 hsa-miR-4423-5p 0 1 0
chr1:150997067|150997245 hsa-miR-10401-5p 1 0 0
chr1:150997067|150997245 hsa-miR-320a-5p 0 1 0
chr1:150997067|150997245 hsa-miR-1915-3p 1 0 0
chr1:150997067|150997245 hsa-miR-3620-5p 1 0 0
chr1:150997067|150997245 hsa-miR-4632-5p 1 0 0
chr1:150997067|150997245 hsa-miR-4700-5p 0 1 0
chr1:150997067|150997245 hsa-miR-6791-5p 1 0 0
chr1:150997067|150997245 hsa-miR-6893-3p 0 1 0
chr1:150997067|150997245 hsa-miR-6837-5p 0 1 0
chr1:150997067|150997245 hsa-miR-10397-5p 0 1 0
chr1:150997067|150997245 hsa-miR-10393-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:150997067|150997245
ORF Type ORF1
Protein Length 53
Nucleotide Length 159
Protein Sequence MDGRQRRQQHVRSRTLPSLTLAFVACSHPQQSINKLSSTSQGWRRGSKPTSHS
Nucleotide Sequence CTGGATGGGAGGCAGAGAAGGCAGCAGCACGTGAGGTCAAGGACATTACCAAGTCTGACCTTGGCATTTGTTGCCTGCTCTCATCCCCAACAGTCCATAAATAAGTTATCCAGCACATCTCAGGGGTGGAGGCGGGGGAGCAAGCCAACTAGCCATAGC

CircID chr1:150997067|150997245
ORF Type ORF2
Protein Length 52
Nucleotide Length 159
Protein Sequence MACSPASTPEMCWITYLWTVGDESRQQMPRSDLVMSLTSRAAAFSASHPGQH
Nucleotide Sequence TTGGCTTGCTCCCCCGCCTCCACCCCTGAGATGTGCTGGATAACTTATTTATGGACTGTTGGGGATGAGAGCAGGCAACAAATGCCAAGGTCAGACTTGGTAATGTCCTTGACCTCACGTGCTGCTGCCTTCTCTGCCTCCCATCCAGGGCAACACTAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites