CircRNA Information

General Information
circRNA Basic Information
CircID chr1:151289708|151289943
Strand +
CircType exon
Host Gene ENSG00000143373.16;
Algorism CIRI2;
Sequence AGGCCACAGGTCCAGCCTCCAGGCCCCCCACCCCCACCCTTGAGGCCTTTGCTCCCTAGTTCCCGCCGAGGCCGTTTGGCTGGACGGGGGGGCTCAGGGGAGCTGGGTACTTCCTCCTCTTCTGAAGATGAAGACGACTCCTCAGTAGCAGGGGCTGCCCCTCCCTGAGAAACAGCCAGCTCCTCAGGCTCAGTCTTGGGGGTCAGCAGGGCACCCCCGGCCCCTTTCCCAGCAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:151289708|151289943 hsa-miR-370-5p 0 0 1
chr1:151289708|151289943 hsa-miR-370-3p 0 0 1
chr1:151289708|151289943 hsa-miR-492 0 0 1
chr1:151289708|151289943 hsa-miR-608 1 0 1
chr1:151289708|151289943 hsa-miR-650 0 0 1
chr1:151289708|151289943 hsa-miR-874-5p 0 0 1
chr1:151289708|151289943 hsa-miR-874-3p 0 0 1
chr1:151289708|151289943 hsa-miR-708-5p 0 0 1
chr1:151289708|151289943 hsa-miR-708-3p 0 0 1
chr1:151289708|151289943 hsa-miR-663b 0 0 1
chr1:151289708|151289943 hsa-miR-1247-5p 0 0 1
chr1:151289708|151289943 hsa-miR-1247-3p 0 0 1
chr1:151289708|151289943 hsa-miR-1266-5p 0 0 1
chr1:151289708|151289943 hsa-miR-1266-3p 0 0 1
chr1:151289708|151289943 hsa-miR-1307-5p 0 0 1
chr1:151289708|151289943 hsa-miR-1307-3p 0 0 1
chr1:151289708|151289943 hsa-miR-1321 0 0 1
chr1:151289708|151289943 hsa-miR-1225-3p 0 1 1
chr1:151289708|151289943 hsa-miR-486-3p 0 1 1
chr1:151289708|151289943 hsa-miR-485-5p 0 1 1
chr1:151289708|151289943 hsa-miR-146b-3p 0 0 1
chr1:151289708|151289943 hsa-miR-423-5p 0 1 1
chr1:151289708|151289943 hsa-miR-28-5p 0 0 1
chr1:151289708|151289943 hsa-miR-331-3p 0 0 1
chr1:151289708|151289943 hsa-miR-628-5p 0 0 1
chr1:151289708|151289943 hsa-miR-342-5p 0 1 1
chr1:151289708|151289943 hsa-miR-125a-5p 0 1 1
chr1:151289708|151289943 hsa-miR-1233 0 0 1
chr1:151289708|151289943 hsa-miR-125b 0 0 1
chr1:151289708|151289943 hsa-miR-1254 0 0 1
chr1:151289708|151289943 hsa-miR-637 1 0 0
chr1:151289708|151289943 hsa-miR-661 1 1 0
chr1:151289708|151289943 hsa-miR-762 1 0 0
chr1:151289708|151289943 hsa-miR-665 1 0 0
chr1:151289708|151289943 hsa-miR-1293 1 0 0
chr1:151289708|151289943 hsa-miR-1268a 1 0 0
chr1:151289708|151289943 hsa-miR-2861 1 1 0
chr1:151289708|151289943 hsa-miR-544b 0 1 0
chr1:151289708|151289943 hsa-miR-3153 0 1 0
chr1:151289708|151289943 hsa-miR-3652 0 1 0
chr1:151289708|151289943 hsa-miR-3916 0 1 0
chr1:151289708|151289943 hsa-miR-1268b 1 0 0
chr1:151289708|151289943 hsa-miR-4471 0 1 0
chr1:151289708|151289943 hsa-miR-4478 1 1 0
chr1:151289708|151289943 hsa-miR-4487 0 1 0
chr1:151289708|151289943 hsa-miR-4488 1 0 0
chr1:151289708|151289943 hsa-miR-4499 0 1 0
chr1:151289708|151289943 hsa-miR-4518 0 1 0
chr1:151289708|151289943 hsa-miR-4651 1 1 0
chr1:151289708|151289943 hsa-miR-4688 0 1 0
chr1:151289708|151289943 hsa-miR-4706 1 0 0
chr1:151289708|151289943 hsa-miR-4734 1 0 0
chr1:151289708|151289943 hsa-miR-4739 1 1 0
chr1:151289708|151289943 hsa-miR-4741 1 0 0
chr1:151289708|151289943 hsa-miR-5572 1 0 0
chr1:151289708|151289943 hsa-miR-5787 1 0 0
chr1:151289708|151289943 hsa-miR-6069 1 0 0
chr1:151289708|151289943 hsa-miR-6081 1 0 0
chr1:151289708|151289943 hsa-miR-6085 1 1 0
chr1:151289708|151289943 hsa-miR-6090 1 0 0
chr1:151289708|151289943 hsa-miR-6745 1 0 0
chr1:151289708|151289943 hsa-miR-7704 1 0 0
chr1:151289708|151289943 hsa-miR-8059 0 1 0
chr1:151289708|151289943 hsa-miR-8089 1 1 0
chr1:151289708|151289943 hsa-miR-12128 1 1 0
chr1:151289708|151289943 hsa-miR-128-1-5p 0 1 0
chr1:151289708|151289943 hsa-miR-6747-5p 1 0 0
chr1:151289708|151289943 hsa-miR-4433a-3p 1 0 0
chr1:151289708|151289943 hsa-miR-3150a-3p 1 0 0
chr1:151289708|151289943 hsa-miR-4687-3p 1 1 0
chr1:151289708|151289943 hsa-miR-766-3p 0 1 0
chr1:151289708|151289943 hsa-miR-3064-5p 0 1 0
chr1:151289708|151289943 hsa-miR-6742-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6748-5p 1 0 0
chr1:151289708|151289943 hsa-miR-185-3p 0 1 0
chr1:151289708|151289943 hsa-miR-6732-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6782-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6786-5p 1 1 0
chr1:151289708|151289943 hsa-miR-7109-5p 1 0 0
chr1:151289708|151289943 hsa-miR-296-3p 1 0 0
chr1:151289708|151289943 hsa-miR-6749-5p 1 0 0
chr1:151289708|151289943 hsa-miR-4787-5p 1 1 0
chr1:151289708|151289943 hsa-miR-149-3p 0 1 0
chr1:151289708|151289943 hsa-miR-6736-3p 0 1 0
chr1:151289708|151289943 hsa-miR-3162-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6781-5p 0 1 0
chr1:151289708|151289943 hsa-miR-361-3p 0 1 0
chr1:151289708|151289943 hsa-miR-6859-3p 0 1 0
chr1:151289708|151289943 hsa-miR-5585-5p 0 1 0
chr1:151289708|151289943 hsa-miR-1233-5p 1 0 0
chr1:151289708|151289943 hsa-miR-4763-3p 1 0 0
chr1:151289708|151289943 hsa-miR-6769b-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6778-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6787-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6816-5p 1 0 0
chr1:151289708|151289943 hsa-miR-1343-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6726-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6737-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6743-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6752-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6756-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6769a-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6803-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6813-5p 0 1 0
chr1:151289708|151289943 hsa-miR-6819-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6842-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6851-5p 1 0 0
chr1:151289708|151289943 hsa-miR-7110-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6722-3p 1 0 0
chr1:151289708|151289943 hsa-miR-6751-5p 1 1 0
chr1:151289708|151289943 hsa-miR-7111-5p 1 0 0
chr1:151289708|151289943 hsa-miR-3620-5p 1 0 0
chr1:151289708|151289943 hsa-miR-4728-5p 0 1 0
chr1:151289708|151289943 hsa-miR-5196-5p 1 1 0
chr1:151289708|151289943 hsa-miR-10526-3p 0 1 0
chr1:151289708|151289943 hsa-miR-1237-5p 1 0 0
chr1:151289708|151289943 hsa-miR-1909-3p 1 0 0
chr1:151289708|151289943 hsa-miR-328-5p 1 1 0
chr1:151289708|151289943 hsa-miR-4649-5p 1 0 0
chr1:151289708|151289943 hsa-miR-4726-5p 1 0 0
chr1:151289708|151289943 hsa-miR-4745-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6795-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6848-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6858-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6887-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6885-5p 1 0 0
chr1:151289708|151289943 hsa-miR-939-5p 1 1 0
chr1:151289708|151289943 hsa-miR-6799-3p 0 1 0
chr1:151289708|151289943 hsa-miR-1199-5p 0 1 0
chr1:151289708|151289943 hsa-miR-4664-5p 0 1 0
chr1:151289708|151289943 hsa-miR-1914-3p 1 0 0
chr1:151289708|151289943 hsa-miR-4646-5p 1 1 0
chr1:151289708|151289943 hsa-miR-4472 0 1 0
chr1:151289708|151289943 hsa-miR-4667-5p 0 1 0
chr1:151289708|151289943 hsa-miR-6791-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6762-5p 1 0 0
chr1:151289708|151289943 hsa-miR-6893-3p 0 1 0
chr1:151289708|151289943 hsa-miR-6801-3p 0 1 0
chr1:151289708|151289943 hsa-miR-6751-3p 0 1 0
chr1:151289708|151289943 hsa-miR-6823-3p 0 1 0
chr1:151289708|151289943 hsa-miR-4756-5p 0 1 0
chr1:151289708|151289943 hsa-miR-4485-3p 0 1 0
chr1:151289708|151289943 hsa-miR-125b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:151289708|151289943
ORF Type ORF1
Protein Length 42
Nucleotide Length 129
Protein Sequence MRPLLPSSRRGRLAGRGGSGELGTSSSSEDEDDSSVAGAAPP
Nucleotide Sequence TTGAGGCCTTTGCTCCCTAGTTCCCGCCGAGGCCGTTTGGCTGGACGGGGGGGCTCAGGGGAGCTGGGTACTTCCTCCTCTTCTGAAGATGAAGACGACTCCTCAGTAGCAGGGGCTGCCCCTCCCTGA
CircID chr1:151289708|151289943
ORF Type ORF2
Protein Length 27
Nucleotide Length 81
Protein Sequence MPLPEKQPAPQAQSWGSAGHPRPLSQQ
Nucleotide Sequence CTGCCCCTCCCTGAGAAACAGCCAGCTCCTCAGGCTCAGTCTTGGGGGTCAGCAGGGCACCCCCGGCCCCTTTCCCAGCAG
CircID chr1:151289708|151289943
ORF Type ORF3
Protein Length 69
Nucleotide Length 207
Protein Sequence MLTPKTEPEELAVSQGGAAPATEESSSSSEEEEVPSSPEPPRPAKRPRRELGSKGLKGGGGGPGGWTCG
Nucleotide Sequence CTGCTGACCCCCAAGACTGAGCCTGAGGAGCTGGCTGTTTCTCAGGGAGGGGCAGCCCCTGCTACTGAGGAGTCGTCTTCATCTTCAGAAGAGGAGGAAGTACCCAGCTCCCCTGAGCCCCCCCGTCCAGCCAAACGGCCTCGGCGGGAACTAGGGAGCAAAGGCCTCAAGGGTGGGGGTGGGGGGCCTGGAGGCTGGACCTGTGGC
CircID chr1:151289708|151289943
ORF Type ORF4
Protein Length 45
Nucleotide Length 138
Protein Sequence MSLRSWLFLREGQPLLLRSRLHLQKRRKYPAPLSPPVQPNGLGGN
Nucleotide Sequence CTGAGCCTGAGGAGCTGGCTGTTTCTCAGGGAGGGGCAGCCCCTGCTACTGAGGAGTCGTCTTCATCTTCAGAAGAGGAGGAAGTACCCAGCTCCCCTGAGCCCCCCCGTCCAGCCAAACGGCCTCGGCGGGAACTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab