CircRNA Information

General Information
circRNA Basic Information
CircID chr1:151400455|151400588
Strand +
CircType exon
Host Gene ENSG00000159377.9;
Algorism CIRI2;
Sequence CTCTCTCCATCAGCATAGCCTCCGATGACCATGGTGTTCCACAAAGGGTTCATCTTCGAGCGCCGGCTGTACATGGCCCTGGTCAGCCATGAATGAATAGCTCTAGGACTATAGCTGTGTCCATCTCCCAGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:151400455|151400588 hsa-miR-185-5p 0 0 1
chr1:151400455|151400588 hsa-miR-185-3p 0 0 1
chr1:151400455|151400588 hsa-miR-1298-5p 0 0 1
chr1:151400455|151400588 hsa-miR-1298-3p 0 0 1
chr1:151400455|151400588 hsa-miR-664 0 0 1
chr1:151400455|151400588 hsa-miR-4314 1 1 0
chr1:151400455|151400588 hsa-miR-4254 0 1 0
chr1:151400455|151400588 hsa-miR-4462 1 0 0
chr1:151400455|151400588 hsa-miR-3689c 1 0 0
chr1:151400455|151400588 hsa-miR-4498 1 0 0
chr1:151400455|151400588 hsa-miR-4525 1 0 0
chr1:151400455|151400588 hsa-miR-4657 1 0 0
chr1:151400455|151400588 hsa-miR-8075 0 1 0
chr1:151400455|151400588 hsa-miR-6799-5p 1 1 0
chr1:151400455|151400588 hsa-miR-3192-5p 1 1 0
chr1:151400455|151400588 hsa-miR-8069 1 0 0
chr1:151400455|151400588 hsa-miR-6798-5p 1 0 0
chr1:151400455|151400588 hsa-miR-4640-5p 1 0 0
chr1:151400455|151400588 hsa-miR-6753-5p 0 1 0
chr1:151400455|151400588 hsa-miR-767-5p 1 1 0
chr1:151400455|151400588 hsa-miR-889-5p 0 1 0
chr1:151400455|151400588 hsa-miR-5010-5p 1 1 0
chr1:151400455|151400588 hsa-miR-6895-5p 0 1 0
chr1:151400455|151400588 hsa-miR-616-3p 0 1 0
chr1:151400455|151400588 hsa-miR-6508-3p 0 1 0
chr1:151400455|151400588 hsa-miR-758-5p 0 1 0
chr1:151400455|151400588 hsa-let-7a-2-3p 0 1 0
chr1:151400455|151400588 hsa-miR-3689b-3p 1 0 0
chr1:151400455|151400588 hsa-miR-5001-5p 1 0 0
chr1:151400455|151400588 hsa-miR-6780a-5p 1 1 0
chr1:151400455|151400588 hsa-miR-4728-5p 1 0 0
chr1:151400455|151400588 hsa-miR-3689a-3p 1 0 0
chr1:151400455|151400588 hsa-miR-6846-5p 1 0 0
chr1:151400455|151400588 hsa-miR-6848-5p 1 0 0
chr1:151400455|151400588 hsa-miR-6762-5p 1 1 0
chr1:151400455|151400588 hsa-miR-6837-5p 0 1 0
chr1:151400455|151400588 hsa-miR-10395-5p 0 1 0
chr1:151400455|151400588 hsa-miR-21-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:151400455|151400588
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGE
Nucleotide Sequence CTGGGAGATGGACACAGCTATAGTCCTAGAGCTATTCATTCATGGCTGACCAGGGCCATGTACAGCCGGCGCTCGAAGATGAACCCTTTGTGGAACACCATGGTCATCGGAGGCTATGCTGATGGAGAG

CircID chr1:151400455|151400588
ORF Type ORF2
Protein Length 26
Nucleotide Length 81
Protein Sequence MADQGHVQPALEDEPFVEHHGHRRLC
Nucleotide Sequence ATGGCTGACCAGGGCCATGTACAGCCGGCGCTCGAAGATGAACCCTTTGTGGAACACCATGGTCATCGGAGGCTATGCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites