CircRNA Information

General Information
circRNA Basic Information
CircID chr1:151537705|151537912
Strand -
CircType exon
Host Gene ENSG00000143375.13;
Algorism CIRI2;
Sequence CCTAAGGCTCAGGGAAATACCCTATGTTATTGTGCTCCCTGGATTCCTGCAACTCATTTTCCTTCCACTCTGGAGCAGGGTGAGGGGAATGTTATGGGTAACAGACATGCAGGCATGGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCATGTGGTAGTCCCCATACCCCTCCAGTTCCTATATTTTTGTCTTCTTCCTTTCCCCT
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:151537705|151537912 hsa-miR-19a-5p 0 0 1
chr1:151537705|151537912 hsa-miR-19a-3p 0 0 1
chr1:151537705|151537912 hsa-miR-527 0 0 1
chr1:151537705|151537912 hsa-miR-571 0 0 1
chr1:151537705|151537912 hsa-miR-660-5p 0 0 1
chr1:151537705|151537912 hsa-miR-660-3p 0 0 1
chr1:151537705|151537912 hsa-miR-543 0 0 1
chr1:151537705|151537912 hsa-miR-1286 0 0 1
chr1:151537705|151537912 hsa-miR-1252-5p 0 0 1
chr1:151537705|151537912 hsa-miR-1252-3p 0 0 1
chr1:151537705|151537912 hsa-miR-296-5p 0 0 1
chr1:151537705|151537912 hsa-miR-525-5p 0 1 1
chr1:151537705|151537912 hsa-miR-654-3p 0 1 1
chr1:151537705|151537912 hsa-miR-140-3p 0 0 1
chr1:151537705|151537912 hsa-miR-520a-5p 0 1 1
chr1:151537705|151537912 hsa-miR-125a-5p 0 0 1
chr1:151537705|151537912 hsa-miR-518a-5p 0 0 1
chr1:151537705|151537912 hsa-miR-1274a 0 0 1
chr1:151537705|151537912 hsa-miR-125b 0 0 1
chr1:151537705|151537912 hsa-miR-19b 0 0 1
chr1:151537705|151537912 hsa-miR-219-1-3p 0 0 1
chr1:151537705|151537912 hsa-miR-608 1 0 0
chr1:151537705|151537912 hsa-miR-609 0 1 0
chr1:151537705|151537912 hsa-miR-3132 1 0 0
chr1:151537705|151537912 hsa-miR-3153 1 1 0
chr1:151537705|151537912 hsa-miR-3185 1 0 0
chr1:151537705|151537912 hsa-miR-4271 1 0 0
chr1:151537705|151537912 hsa-miR-3937 1 0 0
chr1:151537705|151537912 hsa-miR-4428 1 1 0
chr1:151537705|151537912 hsa-miR-4476 1 0 0
chr1:151537705|151537912 hsa-miR-4506 0 1 0
chr1:151537705|151537912 hsa-miR-4533 0 1 0
chr1:151537705|151537912 hsa-miR-4644 1 0 0
chr1:151537705|151537912 hsa-miR-4739 1 0 0
chr1:151537705|151537912 hsa-miR-5093 1 0 0
chr1:151537705|151537912 hsa-miR-5194 1 1 0
chr1:151537705|151537912 hsa-miR-4666b 0 1 0
chr1:151537705|151537912 hsa-miR-6124 1 0 0
chr1:151537705|151537912 hsa-miR-7515 1 0 0
chr1:151537705|151537912 hsa-miR-8085 1 0 0
chr1:151537705|151537912 hsa-miR-12118 1 0 0
chr1:151537705|151537912 hsa-miR-135a-3p 0 1 0
chr1:151537705|151537912 hsa-miR-7106-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6894-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6515-5p 1 1 0
chr1:151537705|151537912 hsa-miR-6746-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6730-5p 1 0 0
chr1:151537705|151537912 hsa-miR-197-5p 1 0 0
chr1:151537705|151537912 hsa-miR-3189-5p 1 1 0
chr1:151537705|151537912 hsa-miR-6716-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6760-5p 1 1 0
chr1:151537705|151537912 hsa-miR-6881-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6782-5p 1 0 0
chr1:151537705|151537912 hsa-miR-4793-5p 0 1 0
chr1:151537705|151537912 hsa-miR-6847-5p 1 0 0
chr1:151537705|151537912 hsa-miR-3202 1 1 0
chr1:151537705|151537912 hsa-miR-6830-5p 1 0 0
chr1:151537705|151537912 hsa-miR-3162-5p 1 0 0
chr1:151537705|151537912 hsa-miR-5010-5p 1 0 0
chr1:151537705|151537912 hsa-miR-5584-5p 0 1 0
chr1:151537705|151537912 hsa-miR-6872-3p 0 1 0
chr1:151537705|151537912 hsa-miR-1296-5p 0 1 0
chr1:151537705|151537912 hsa-miR-6826-3p 0 1 0
chr1:151537705|151537912 hsa-miR-7113-5p 0 1 0
chr1:151537705|151537912 hsa-miR-5591-3p 0 1 0
chr1:151537705|151537912 hsa-miR-3620-3p 0 1 0
chr1:151537705|151537912 hsa-miR-6729-3p 0 1 0
chr1:151537705|151537912 hsa-miR-1207-5p 1 0 0
chr1:151537705|151537912 hsa-miR-1233-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6778-5p 1 1 0
chr1:151537705|151537912 hsa-miR-1343-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6752-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6769a-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6803-5p 1 0 0
chr1:151537705|151537912 hsa-miR-1249-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6722-3p 1 0 0
chr1:151537705|151537912 hsa-miR-6797-5p 1 0 0
chr1:151537705|151537912 hsa-miR-5196-5p 1 1 0
chr1:151537705|151537912 hsa-miR-6780b-5p 1 0 0
chr1:151537705|151537912 hsa-miR-328-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6735-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6738-5p 1 1 0
chr1:151537705|151537912 hsa-miR-6883-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6511a-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6731-5p 1 0 0
chr1:151537705|151537912 hsa-miR-6739-5p 0 1 0
chr1:151537705|151537912 hsa-miR-1914-3p 1 0 0
chr1:151537705|151537912 hsa-miR-6876-5p 1 1 0
chr1:151537705|151537912 hsa-miR-6891-5p 1 0 0
chr1:151537705|151537912 hsa-miR-4716-3p 0 1 0
chr1:151537705|151537912 hsa-miR-6862-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:151537705|151537912
ORF Type ORF1
Protein Length 46
Nucleotide Length 138
Protein Sequence MEQGEGNVMGNRHAGMALPISLHKYGAHVVVPIPLQFLYFCLLPFP
Nucleotide Sequence CTGGAGCAGGGTGAGGGGAATGTTATGGGTAACAGACATGCAGGCATGGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCATGTGGTAGTCCCCATACCCCTCCAGTTCCTATATTTTTGTCTTCTTCCTTTCCCC
CircID chr1:151537705|151537912
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MQLIFLPLWSRVRGMLWVTDMQAWLYPFLCTSMGPMW
Nucleotide Sequence CTGCAACTCATTTTCCTTCCACTCTGGAGCAGGGTGAGGGGAATGTTATGGGTAACAGACATGCAGGCATGGCTCTACCCATTTCTTTGCACAAGTATGGGGCCCATGTGGTAG
CircID chr1:151537705|151537912
ORF Type ORF3
Protein Length 28
Nucleotide Length 87
Protein Sequence MSVTHNIPLTLLQSGRKMSCRNPGSTIT
Nucleotide Sequence ATGTCTGTTACCCATAACATTCCCCTCACCCTGCTCCAGAGTGGAAGGAAAATGAGTTGCAGGAATCCAGGGAGCACAATAACATAG
CircID chr1:151537705|151537912
ORF Type ORF4
Protein Length 37
Nucleotide Length 114
Protein Sequence MGTTTWAPYLCKEMGRAMPACLLPITFPSPCSRVEGK
Nucleotide Sequence ATGGGGACTACCACATGGGCCCCATACTTGTGCAAAGAAATGGGTAGAGCCATGCCTGCATGTCTGTTACCCATAACATTCCCCTCACCCTGCTCCAGAGTGGAAGGAAAATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab