CircRNA Information

General Information
circRNA Basic Information
CircID chr1:152032565|152032811
Strand +
CircType exon
Host Gene ENSG00000163191.5;
Algorism CIRI2;
Sequence CCTGGTGTCCTTGACCGCATGATGAAGAAACTGGACACCAACAGTGATGGTCAGCTAGATTTCTCAGAATTTCTTAATCTGATTGGTGGCCTAGCTATGGCTTGCCATGACTCCTTCCTCAAGGCTGTCCCTTCCCAGAAGCGGACCTGAGGACCCCTTGGCCCTGGCCTTCAAACCCACCCCCTTTCCTTCCAGCCTTTCTGTCATCATCTCCACAGCCCACCCATCCCCTGAGCACACTAACCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:152032565|152032811 hsa-miR-31-5p 0 0 1
chr1:152032565|152032811 hsa-miR-31-3p 0 0 1
chr1:152032565|152032811 hsa-miR-198 0 0 1
chr1:152032565|152032811 hsa-miR-143-5p 0 0 1
chr1:152032565|152032811 hsa-miR-143-3p 0 0 1
chr1:152032565|152032811 hsa-miR-539-5p 0 0 1
chr1:152032565|152032811 hsa-miR-539-3p 0 0 1
chr1:152032565|152032811 hsa-miR-591 0 0 1
chr1:152032565|152032811 hsa-miR-608 1 1 1
chr1:152032565|152032811 hsa-miR-620 0 1 1
chr1:152032565|152032811 hsa-miR-629-5p 0 0 1
chr1:152032565|152032811 hsa-miR-629-3p 0 0 1
chr1:152032565|152032811 hsa-miR-648 1 1 1
chr1:152032565|152032811 hsa-miR-541-5p 0 0 1
chr1:152032565|152032811 hsa-miR-541-3p 0 0 1
chr1:152032565|152032811 hsa-miR-1208 0 0 1
chr1:152032565|152032811 hsa-miR-1293 1 0 1
chr1:152032565|152032811 hsa-miR-1266-5p 0 0 1
chr1:152032565|152032811 hsa-miR-1266-3p 0 0 1
chr1:152032565|152032811 hsa-miR-1270 1 1 1
chr1:152032565|152032811 hsa-miR-1272 0 1 1
chr1:152032565|152032811 hsa-miR-1252-5p 0 0 1
chr1:152032565|152032811 hsa-miR-1252-3p 0 0 1
chr1:152032565|152032811 hsa-miR-1197 0 0 1
chr1:152032565|152032811 hsa-miR-145-5p 0 0 1
chr1:152032565|152032811 hsa-miR-1224-5p 0 0 1
chr1:152032565|152032811 hsa-miR-615-5p 0 1 1
chr1:152032565|152032811 hsa-miR-654-5p 0 0 1
chr1:152032565|152032811 hsa-miR-595 1 0 0
chr1:152032565|152032811 hsa-miR-638 1 0 0
chr1:152032565|152032811 hsa-miR-762 1 0 0
chr1:152032565|152032811 hsa-miR-933 1 0 0
chr1:152032565|152032811 hsa-miR-1268a 1 0 0
chr1:152032565|152032811 hsa-miR-3141 1 0 0
chr1:152032565|152032811 hsa-miR-3154 1 0 0
chr1:152032565|152032811 hsa-miR-4299 1 0 0
chr1:152032565|152032811 hsa-miR-4298 1 0 0
chr1:152032565|152032811 hsa-miR-4314 0 1 0
chr1:152032565|152032811 hsa-miR-4255 1 0 0
chr1:152032565|152032811 hsa-miR-4270 1 0 0
chr1:152032565|152032811 hsa-miR-3652 1 1 0
chr1:152032565|152032811 hsa-miR-3936 0 1 0
chr1:152032565|152032811 hsa-miR-1268b 1 0 0
chr1:152032565|152032811 hsa-miR-4429 1 0 0
chr1:152032565|152032811 hsa-miR-4430 1 1 0
chr1:152032565|152032811 hsa-miR-4437 1 0 0
chr1:152032565|152032811 hsa-miR-4450 1 0 0
chr1:152032565|152032811 hsa-miR-3135b 1 0 0
chr1:152032565|152032811 hsa-miR-4476 1 1 0
chr1:152032565|152032811 hsa-miR-4481 1 0 0
chr1:152032565|152032811 hsa-miR-4488 1 0 0
chr1:152032565|152032811 hsa-miR-4498 1 0 0
chr1:152032565|152032811 hsa-miR-4505 1 0 0
chr1:152032565|152032811 hsa-miR-4506 1 0 0
chr1:152032565|152032811 hsa-miR-2392 1 0 0
chr1:152032565|152032811 hsa-miR-4507 1 0 0
chr1:152032565|152032811 hsa-miR-4516 1 0 0
chr1:152032565|152032811 hsa-miR-4518 1 1 0
chr1:152032565|152032811 hsa-miR-4525 1 0 0
chr1:152032565|152032811 hsa-miR-4526 0 1 0
chr1:152032565|152032811 hsa-miR-4533 1 1 0
chr1:152032565|152032811 hsa-miR-4534 1 0 0
chr1:152032565|152032811 hsa-miR-1587 1 0 0
chr1:152032565|152032811 hsa-miR-4538 1 0 0
chr1:152032565|152032811 hsa-miR-4651 1 1 0
chr1:152032565|152032811 hsa-miR-4656 1 0 0
chr1:152032565|152032811 hsa-miR-4675 1 0 0
chr1:152032565|152032811 hsa-miR-4689 1 0 0
chr1:152032565|152032811 hsa-miR-4706 1 0 0
chr1:152032565|152032811 hsa-miR-4710 1 0 0
chr1:152032565|152032811 hsa-miR-4739 1 0 0
chr1:152032565|152032811 hsa-miR-4741 1 1 0
chr1:152032565|152032811 hsa-miR-5093 1 0 0
chr1:152032565|152032811 hsa-miR-5572 1 0 0
chr1:152032565|152032811 hsa-miR-5704 0 1 0
chr1:152032565|152032811 hsa-miR-5787 1 0 0
chr1:152032565|152032811 hsa-miR-6085 1 0 0
chr1:152032565|152032811 hsa-miR-6088 1 1 0
chr1:152032565|152032811 hsa-miR-6125 1 0 0
chr1:152032565|152032811 hsa-miR-6126 0 1 0
chr1:152032565|152032811 hsa-miR-6127 1 0 0
chr1:152032565|152032811 hsa-miR-6132 1 0 0
chr1:152032565|152032811 hsa-miR-6133 1 0 0
chr1:152032565|152032811 hsa-miR-6745 1 0 0
chr1:152032565|152032811 hsa-miR-7515 1 0 0
chr1:152032565|152032811 hsa-miR-11399 0 1 0
chr1:152032565|152032811 hsa-miR-12120 1 0 0
chr1:152032565|152032811 hsa-miR-12122 1 0 0
chr1:152032565|152032811 hsa-miR-12128 1 0 0
chr1:152032565|152032811 hsa-miR-4433b-3p 1 0 0
chr1:152032565|152032811 hsa-miR-6734-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6747-5p 1 0 0
chr1:152032565|152032811 hsa-miR-1287-5p 1 0 0
chr1:152032565|152032811 hsa-miR-7106-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6894-5p 1 0 0
chr1:152032565|152032811 hsa-miR-4687-3p 1 0 0
chr1:152032565|152032811 hsa-miR-6854-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6799-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6728-5p 1 0 0
chr1:152032565|152032811 hsa-miR-8071 1 0 0
chr1:152032565|152032811 hsa-miR-766-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6833-5p 1 0 0
chr1:152032565|152032811 hsa-miR-7114-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6089 1 0 0
chr1:152032565|152032811 hsa-miR-3192-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6757-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6873-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6880-5p 1 0 0
chr1:152032565|152032811 hsa-miR-7847-3p 1 0 0
chr1:152032565|152032811 hsa-miR-6744-5p 1 0 0
chr1:152032565|152032811 hsa-miR-4722-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6730-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6741-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6727-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6759-5p 1 0 0
chr1:152032565|152032811 hsa-miR-8069 1 0 0
chr1:152032565|152032811 hsa-miR-3682-3p 1 0 0
chr1:152032565|152032811 hsa-miR-27b-5p 1 0 0
chr1:152032565|152032811 hsa-miR-7845-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6742-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6716-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6748-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6793-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6796-5p 1 0 0
chr1:152032565|152032811 hsa-miR-185-3p 1 0 0
chr1:152032565|152032811 hsa-miR-6829-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6732-5p 1 1 0
chr1:152032565|152032811 hsa-miR-3190-3p 1 0 0
chr1:152032565|152032811 hsa-miR-6805-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6798-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6782-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6888-5p 1 0 0
chr1:152032565|152032811 hsa-miR-3934-3p 1 0 0
chr1:152032565|152032811 hsa-miR-6786-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6835-5p 1 0 0
chr1:152032565|152032811 hsa-miR-1226-5p 1 0 0
chr1:152032565|152032811 hsa-miR-204-3p 0 1 0
chr1:152032565|152032811 hsa-miR-1229-5p 1 0 0
chr1:152032565|152032811 hsa-miR-4640-5p 1 0 0
chr1:152032565|152032811 hsa-miR-3127-5p 1 0 0
chr1:152032565|152032811 hsa-miR-92b-5p 1 0 0
chr1:152032565|152032811 hsa-miR-3202 1 1 0
chr1:152032565|152032811 hsa-miR-7854-3p 1 0 0
chr1:152032565|152032811 hsa-miR-4787-5p 1 0 0
chr1:152032565|152032811 hsa-miR-4446-3p 1 0 0
chr1:152032565|152032811 hsa-miR-149-3p 1 0 0
chr1:152032565|152032811 hsa-miR-6824-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6802-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6781-5p 1 0 0
chr1:152032565|152032811 hsa-miR-5010-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6866-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6761-5p 0 1 0
chr1:152032565|152032811 hsa-miR-1207-5p 1 0 0
chr1:152032565|152032811 hsa-miR-1233-5p 1 0 0
chr1:152032565|152032811 hsa-miR-1273h-5p 1 0 0
chr1:152032565|152032811 hsa-miR-4763-3p 1 0 0
chr1:152032565|152032811 hsa-miR-6769b-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6778-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6816-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6775-5p 1 0 0
chr1:152032565|152032811 hsa-miR-5001-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6737-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6752-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6754-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6756-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6769a-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6803-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6813-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6819-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6842-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6851-5p 1 0 0
chr1:152032565|152032811 hsa-miR-7110-5p 1 0 0
chr1:152032565|152032811 hsa-miR-1249-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6722-3p 1 1 0
chr1:152032565|152032811 hsa-miR-6751-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6779-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6780a-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6788-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6797-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6808-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6879-5p 1 0 0
chr1:152032565|152032811 hsa-miR-7111-5p 1 0 0
chr1:152032565|152032811 hsa-miR-3620-5p 1 0 0
chr1:152032565|152032811 hsa-miR-4728-5p 1 0 0
chr1:152032565|152032811 hsa-miR-5196-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6780b-5p 1 0 0
chr1:152032565|152032811 hsa-miR-10526-3p 1 1 0
chr1:152032565|152032811 hsa-miR-1237-5p 1 0 0
chr1:152032565|152032811 hsa-miR-1909-3p 1 0 0
chr1:152032565|152032811 hsa-miR-4649-5p 1 0 0
chr1:152032565|152032811 hsa-miR-4701-3p 1 0 0
chr1:152032565|152032811 hsa-miR-4725-3p 0 1 0
chr1:152032565|152032811 hsa-miR-4745-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6735-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6794-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6846-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6848-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6858-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6883-5p 1 0 0
chr1:152032565|152032811 hsa-miR-4436b-3p 1 0 0
chr1:152032565|152032811 hsa-miR-4758-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6511a-5p 1 0 0
chr1:152032565|152032811 hsa-miR-3940-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6758-5p 1 0 0
chr1:152032565|152032811 hsa-miR-1914-3p 1 0 0
chr1:152032565|152032811 hsa-miR-4700-5p 1 1 0
chr1:152032565|152032811 hsa-miR-4646-5p 1 1 0
chr1:152032565|152032811 hsa-miR-4747-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6876-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6766-5p 1 1 0
chr1:152032565|152032811 hsa-miR-6785-5p 1 0 0
chr1:152032565|152032811 hsa-miR-6790-5p 1 0 0
chr1:152032565|152032811 hsa-miR-10400-3p 1 0 0
chr1:152032565|152032811 hsa-miR-320a-3p 1 0 0
chr1:152032565|152032811 hsa-miR-320b 1 0 0
chr1:152032565|152032811 hsa-miR-320c 1 0 0
chr1:152032565|152032811 hsa-miR-6837-5p 0 1 0
chr1:152032565|152032811 hsa-miR-6884-5p 1 0 0
chr1:152032565|152032811 hsa-miR-320d 1 0 0
chr1:152032565|152032811 hsa-miR-3136-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:152032565|152032811
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MMKKLDTNSDGQLDFSEFLNLIGGLAMACHDSFLKAVPSQKRT
Nucleotide Sequence ATGATGAAGAAACTGGACACCAACAGTGATGGTCAGCTAGATTTCTCAGAATTTCTTAATCTGATTGGTGGCCTAGCTATGGCTTGCCATGACTCCTTCCTCAAGGCTGTCCCTTCCCAGAAGCGGACCTGA
CircID chr1:152032565|152032811
ORF Type ORF2
Protein Length 47
Nucleotide Length 141
Protein Sequence MTPSSRLSLPRSGPEDPLALAFKPTPFPSSLSVIISTAHPSPEHTNH
Nucleotide Sequence ATGACTCCTTCCTCAAGGCTGTCCCTTCCCAGAAGCGGACCTGAGGACCCCTTGGCCCTGGCCTTCAAACCCACCCCCTTTCCTTCCAGCCTTTCTGTCATCATCTCCACAGCCCACCCATCCCCTGAGCACACTAACCAC
CircID chr1:152032565|152032811
ORF Type ORF3
Protein Length 33
Nucleotide Length 99
Protein Sequence MRTPWPWPSNPPPFLPAFLSSSPQPTHPLSTLT
Nucleotide Sequence CTGAGGACCCCTTGGCCCTGGCCTTCAAACCCACCCCCTTTCCTTCCAGCCTTTCTGTCATCATCTCCACAGCCCACCCATCCCCTGAGCACACTAACC
CircID chr1:152032565|152032811
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MMTERLEGKGVGLKARAKGSSGPLLGRDSLEEGVMASHS
Nucleotide Sequence ATGATGACAGAAAGGCTGGAAGGAAAGGGGGTGGGTTTGAAGGCCAGGGCCAAGGGGTCCTCAGGTCCGCTTCTGGGAAGGGACAGCCTTGAGGAAGGAGTCATGGCAAGCCATAGCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab