CircRNA Information

General Information
circRNA Basic Information
CircID chr1:152911316|152911489
Strand +
CircType exon
Host Gene ENSG00000163207.6;
Algorism CIRI2;
Sequence TTCTCCCTTTGTGGGCAGGGCTGGTTGAATGTCTTGGACCTGGCCTGGAGCTGGGGCAAACACAGGCTGCTCCAGCTGCCCCTTCTGCTGCTCCAGGTCCTTCAGCTGCCCCTCCTGCTGCTCCAGATGTTTTAGTTGTCCGTCCTGCTGCTCTGGGTGCTCTAGGTGCTTTTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:152911316|152911489 hsa-miR-15a-5p 0 0 1
chr1:152911316|152911489 hsa-miR-15a-3p 0 0 1
chr1:152911316|152911489 hsa-miR-181c-5p 0 0 1
chr1:152911316|152911489 hsa-miR-181c-3p 0 0 1
chr1:152911316|152911489 hsa-miR-214-5p 0 0 1
chr1:152911316|152911489 hsa-miR-214-3p 0 0 1
chr1:152911316|152911489 hsa-miR-15b-5p 0 0 1
chr1:152911316|152911489 hsa-miR-15b-3p 0 0 1
chr1:152911316|152911489 hsa-miR-184 1 0 1
chr1:152911316|152911489 hsa-miR-195-5p 0 0 1
chr1:152911316|152911489 hsa-miR-195-3p 0 0 1
chr1:152911316|152911489 hsa-miR-424-5p 0 0 1
chr1:152911316|152911489 hsa-miR-424-3p 0 0 1
chr1:152911316|152911489 hsa-miR-492 0 0 1
chr1:152911316|152911489 hsa-miR-497-5p 0 0 1
chr1:152911316|152911489 hsa-miR-497-3p 0 0 1
chr1:152911316|152911489 hsa-miR-181d-5p 0 0 1
chr1:152911316|152911489 hsa-miR-181d-3p 0 0 1
chr1:152911316|152911489 hsa-miR-619-5p 0 0 1
chr1:152911316|152911489 hsa-miR-619-3p 0 0 1
chr1:152911316|152911489 hsa-miR-631 0 0 1
chr1:152911316|152911489 hsa-miR-641 0 0 1
chr1:152911316|152911489 hsa-miR-298 0 0 1
chr1:152911316|152911489 hsa-miR-922 0 0 1
chr1:152911316|152911489 hsa-miR-1286 0 0 1
chr1:152911316|152911489 hsa-miR-1252-5p 0 0 1
chr1:152911316|152911489 hsa-miR-1252-3p 0 0 1
chr1:152911316|152911489 hsa-miR-486-3p 1 0 1
chr1:152911316|152911489 hsa-miR-423-5p 0 0 1
chr1:152911316|152911489 hsa-miR-1207-3p 0 0 1
chr1:152911316|152911489 hsa-miR-16 0 0 1
chr1:152911316|152911489 hsa-miR-181a 0 0 1
chr1:152911316|152911489 hsa-miR-181b 0 0 1
chr1:152911316|152911489 hsa-miR-516b 0 0 1
chr1:152911316|152911489 hsa-miR-549 0 0 1
chr1:152911316|152911489 hsa-miR-663a 1 0 0
chr1:152911316|152911489 hsa-miR-761 1 0 0
chr1:152911316|152911489 hsa-miR-1203 1 0 0
chr1:152911316|152911489 hsa-miR-3154 1 0 0
chr1:152911316|152911489 hsa-miR-3196 1 0 0
chr1:152911316|152911489 hsa-miR-4298 1 0 0
chr1:152911316|152911489 hsa-miR-3918 1 0 0
chr1:152911316|152911489 hsa-miR-4530 1 0 0
chr1:152911316|152911489 hsa-miR-4688 1 0 0
chr1:152911316|152911489 hsa-miR-4696 1 0 0
chr1:152911316|152911489 hsa-miR-4739 1 0 0
chr1:152911316|152911489 hsa-miR-5090 1 0 0
chr1:152911316|152911489 hsa-miR-6165 1 0 0
chr1:152911316|152911489 hsa-miR-8055 1 0 0
chr1:152911316|152911489 hsa-miR-6894-5p 1 0 0
chr1:152911316|152911489 hsa-miR-3663-3p 1 0 0
chr1:152911316|152911489 hsa-miR-6820-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6805-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6798-5p 1 0 0
chr1:152911316|152911489 hsa-miR-3156-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6858-3p 1 0 0
chr1:152911316|152911489 hsa-miR-6753-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6749-5p 1 0 0
chr1:152911316|152911489 hsa-miR-149-3p 1 0 0
chr1:152911316|152911489 hsa-miR-6501-3p 1 0 0
chr1:152911316|152911489 hsa-miR-10400-5p 1 0 0
chr1:152911316|152911489 hsa-miR-4763-3p 1 0 0
chr1:152911316|152911489 hsa-miR-6816-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6743-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6756-5p 1 0 0
chr1:152911316|152911489 hsa-miR-7107-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6879-5p 1 0 0
chr1:152911316|152911489 hsa-miR-1915-3p 1 0 0
chr1:152911316|152911489 hsa-miR-4728-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6836-5p 1 0 0
chr1:152911316|152911489 hsa-miR-328-5p 1 0 0
chr1:152911316|152911489 hsa-miR-4632-5p 1 0 0
chr1:152911316|152911489 hsa-miR-4685-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6735-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6738-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6887-5p 1 0 0
chr1:152911316|152911489 hsa-miR-939-5p 1 0 0
chr1:152911316|152911489 hsa-miR-6837-5p 1 0 0
chr1:152911316|152911489 hsa-miR-3619-5p 1 0 0
chr1:152911316|152911489 hsa-miR-1912-3p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr1:152911316|152911489
ORF Type ORF1
Protein Length 36
Nucleotide Length 111
Protein Sequence MNVLDLAWSWGKHRLLQLPLLLLQVLQLPLLLLQMF
Nucleotide Sequence TTGAATGTCTTGGACCTGGCCTGGAGCTGGGGCAAACACAGGCTGCTCCAGCTGCCCCTTCTGCTGCTCCAGGTCCTTCAGCTGCCCCTCCTGCTGCTCCAGATGTTTTAG
CircID chr1:152911316|152911489
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MSWTWPGAGANTGCSSCPFCCSRSFSCPSCCSRCFSCPSCCSGCSRCF
Nucleotide Sequence ATGTCTTGGACCTGGCCTGGAGCTGGGGCAAACACAGGCTGCTCCAGCTGCCCCTTCTGCTGCTCCAGGTCCTTCAGCTGCCCCTCCTGCTGCTCCAGATGTTTTAGTTGTCCGTCCTGCTGCTCTGGGTGCTCTAGGTGCTTT
CircID chr1:152911316|152911489
ORF Type ORF3
Protein Length 55
Nucleotide Length 165
Protein Sequence MWAGLVECLGPGLELGQTQAAPAAPSAAPGPSAAPPAAPDVLVVRPAALGALGAF
Nucleotide Sequence TTGTGGGCAGGGCTGGTTGAATGTCTTGGACCTGGCCTGGAGCTGGGGCAAACACAGGCTGCTCCAGCTGCCCCTTCTGCTGCTCCAGGTCCTTCAGCTGCCCCTCCTGCTGCTCCAGATGTTTTAGTTGTCCGTCCTGCTGCTCTGGGTGCTCTAGGTGCTTTT
CircID chr1:152911316|152911489
ORF Type ORF4
Protein Length 42
Nucleotide Length 126
Protein Sequence MEQQEGQLKDLEQQKGQLEQPVFAPAPGQVQDIQPALPTKGE
Nucleotide Sequence CTGGAGCAGCAGGAGGGGCAGCTGAAGGACCTGGAGCAGCAGAAGGGGCAGCTGGAGCAGCCTGTGTTTGCCCCAGCTCCAGGCCAGGTCCAAGACATTCAACCAGCCCTGCCCACAAAGGGAGAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab