CircNet

General Information

circRNA Basic Information

CircID	chr1:153606172\|153606296
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CTGTATTCTCAACTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGTACCCGGGAGGCGGAGCTTGCGGTGAGCCGAGATTGCACGCCATTGCACTCCAGCCTGGGCAACAAGAGTGAAACTCCAT

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:153606172\|153606296	hsa-miR-122-5p	0	0	1
chr1:153606172\|153606296	hsa-miR-122-3p	0	0	1
chr1:153606172\|153606296	hsa-miR-130a-5p	0	0	1
chr1:153606172\|153606296	hsa-miR-130a-3p	0	0	1
chr1:153606172\|153606296	hsa-miR-301a-5p	0	0	1
chr1:153606172\|153606296	hsa-miR-301a-3p	0	0	1
chr1:153606172\|153606296	hsa-miR-130b-5p	0	0	1
chr1:153606172\|153606296	hsa-miR-130b-3p	0	0	1
chr1:153606172\|153606296	hsa-miR-580-5p	0	0	1
chr1:153606172\|153606296	hsa-miR-580-3p	0	0	1
chr1:153606172\|153606296	hsa-miR-454-5p	0	0	1
chr1:153606172\|153606296	hsa-miR-454-3p	0	0	1
chr1:153606172\|153606296	hsa-miR-301b-5p	0	0	1
chr1:153606172\|153606296	hsa-miR-301b-3p	0	0	1
chr1:153606172\|153606296	hsa-miR-1281	0	0	1
chr1:153606172\|153606296	hsa-miR-1307-5p	0	0	1
chr1:153606172\|153606296	hsa-miR-1307-3p	0	0	1
chr1:153606172\|153606296	hsa-miR-1244	0	0	1
chr1:153606172\|153606296	hsa-miR-1300	0	0	1
chr1:153606172\|153606296	hsa-miR-3135a	1	1	0
chr1:153606172\|153606296	hsa-miR-3615	1	1	0
chr1:153606172\|153606296	hsa-miR-3652	0	1	0
chr1:153606172\|153606296	hsa-miR-4430	0	1	0
chr1:153606172\|153606296	hsa-miR-3135b	0	1	0
chr1:153606172\|153606296	hsa-miR-504-3p	0	1	0
chr1:153606172\|153606296	hsa-miR-6882-3p	1	0	0
chr1:153606172\|153606296	hsa-miR-6809-3p	0	1	0
chr1:153606172\|153606296	hsa-miR-5001-5p	0	1	0
chr1:153606172\|153606296	hsa-miR-6805-3p	1	0	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:153606172\|153606296
ORF Type	ORF1
Protein Length	38
Nucleotide Length	117
Protein Sequence	LYSQLLGRLRQENCLYPGGGACGEPRLHAIALQPGQQE
Nucleotide Sequence	CTGTATTCTCAACTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGTACCCGGGAGGCGGAGCTTGCGGTGAGCCGAGATTGCACGCCATTGCACTCCAGCCTGGGCAACAAGAGTGA

CircID	chr1:153606172\|153606296
ORF Type	ORF2
Protein Length	38
Nucleotide Length	117
Protein Sequence	MEFHSCCPGWSAMACNLGSPQAPPPGYKQFSCLSLPSS
Nucleotide Sequence	ATGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAATGGCGTGCAATCTCGGCTCACCGCAAGCTCCGCCTCCCGGGTACAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAGTTGA

CircID	chr1:153606172\|153606296
ORF Type	ORF3
Protein Length	32
Nucleotide Length	99
Protein Sequence	MLPRLECNGVQSRLTASSASRVQAILLPQPPE
Nucleotide Sequence	TTGTTGCCCAGGCTGGAGTGCAATGGCGTGCAATCTCGGCTCACCGCAAGCTCCGCCTCCCGGGTACAAGCAATTCTCCTGCCTCAGCCTCCCGAGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information