CircRNA Information

General Information
circRNA Basic Information
CircID chr1:153607342|153607537
Strand -
CircType exon
Host Gene ENSG00000188643.9;
Algorism CIRI2;
Sequence CCCCCAGGGAGGGAGGTACCTCTAGACTGAGACACTCACAAAGGGACCCCAGTTCAGCAAGGGTCAGAGGAAGGTCTGGAGGGAGAAGAGAGTAAAGGGCCCTGGGTGGGCAGGAGGCTGAGGAGGGAGCCTGGGGAGAGCACCAGGGCGGGGCATCAGGCCAGTGCCTGGAAGGTGTGGCCAAAGGGGTCTCTAG
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:153607342|153607537 hsa-miR-204-5p 0 0 1
chr1:153607342|153607537 hsa-miR-204-3p 0 0 1
chr1:153607342|153607537 hsa-miR-211-5p 0 0 1
chr1:153607342|153607537 hsa-miR-211-3p 0 0 1
chr1:153607342|153607537 hsa-miR-484 1 0 1
chr1:153607342|153607537 hsa-miR-193b-5p 0 0 1
chr1:153607342|153607537 hsa-miR-193b-3p 0 0 1
chr1:153607342|153607537 hsa-miR-504-5p 0 0 1
chr1:153607342|153607537 hsa-miR-504-3p 0 0 1
chr1:153607342|153607537 hsa-miR-588 0 0 1
chr1:153607342|153607537 hsa-miR-622 0 0 1
chr1:153607342|153607537 hsa-miR-637 0 0 1
chr1:153607342|153607537 hsa-miR-758-5p 0 0 1
chr1:153607342|153607537 hsa-miR-758-3p 0 0 1
chr1:153607342|153607537 hsa-miR-942-5p 0 0 1
chr1:153607342|153607537 hsa-miR-942-3p 0 0 1
chr1:153607342|153607537 hsa-miR-1228-5p 0 0 1
chr1:153607342|153607537 hsa-miR-1228-3p 0 0 1
chr1:153607342|153607537 hsa-miR-1236-5p 0 0 1
chr1:153607342|153607537 hsa-miR-1236-3p 0 0 1
chr1:153607342|153607537 hsa-miR-615-5p 0 0 1
chr1:153607342|153607537 hsa-miR-574-5p 0 0 1
chr1:153607342|153607537 hsa-miR-628-5p 0 0 1
chr1:153607342|153607537 hsa-miR-518d-5p 0 0 1
chr1:153607342|153607537 hsa-miR-519b-5p 0 0 1
chr1:153607342|153607537 hsa-miR-519c-5p 0 0 1
chr1:153607342|153607537 hsa-miR-520c-5p 0 0 1
chr1:153607342|153607537 hsa-miR-193a-3p 0 0 1
chr1:153607342|153607537 hsa-miR-526a 0 0 1
chr1:153607342|153607537 hsa-miR-1201 0 0 1
chr1:153607342|153607537 hsa-miR-326 1 0 0
chr1:153607342|153607537 hsa-miR-1260a 1 0 0
chr1:153607342|153607537 hsa-miR-1470 1 0 0
chr1:153607342|153607537 hsa-miR-3907 1 0 0
chr1:153607342|153607537 hsa-miR-5193 1 0 0
chr1:153607342|153607537 hsa-miR-6749-3p 1 0 0
chr1:153607342|153607537 hsa-miR-4665-3p 1 0 0
chr1:153607342|153607537 hsa-miR-4726-3p 1 0 0
chr1:153607342|153607537 hsa-miR-212-5p 1 0 0
chr1:153607342|153607537 hsa-miR-766-3p 1 0 0
chr1:153607342|153607537 hsa-miR-296-5p 1 0 0
chr1:153607342|153607537 hsa-miR-6840-5p 1 0 0
chr1:153607342|153607537 hsa-miR-6762-3p 1 0 0
chr1:153607342|153607537 hsa-miR-7110-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6787-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6845-3p 1 0 0
chr1:153607342|153607537 hsa-miR-877-3p 1 0 0
chr1:153607342|153607537 hsa-miR-4655-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6728-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6735-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6882-3p 1 0 0
chr1:153607342|153607537 hsa-miR-4713-5p 1 0 0
chr1:153607342|153607537 hsa-miR-939-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6763-3p 1 0 0
chr1:153607342|153607537 hsa-miR-7108-3p 1 0 0
chr1:153607342|153607537 hsa-miR-1247-5p 1 0 0
chr1:153607342|153607537 hsa-miR-6894-3p 1 0 0
chr1:153607342|153607537 hsa-miR-7113-3p 1 0 0
chr1:153607342|153607537 hsa-miR-3667-3p 1 0 0
chr1:153607342|153607537 hsa-miR-4783-5p 1 0 0
chr1:153607342|153607537 hsa-miR-7111-3p 1 0 0
chr1:153607342|153607537 hsa-miR-4667-3p 1 0 0
chr1:153607342|153607537 hsa-miR-339-5p 1 0 0
chr1:153607342|153607537 hsa-miR-6743-3p 1 0 0
chr1:153607342|153607537 hsa-miR-1238-3p 1 0 0
chr1:153607342|153607537 hsa-miR-1224-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6741-3p 1 0 0
chr1:153607342|153607537 hsa-miR-1296-5p 1 0 0
chr1:153607342|153607537 hsa-miR-6826-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6886-3p 1 0 0
chr1:153607342|153607537 hsa-miR-5088-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6851-3p 1 0 0
chr1:153607342|153607537 hsa-miR-3173-5p 1 0 0
chr1:153607342|153607537 hsa-miR-6812-3p 1 0 0
chr1:153607342|153607537 hsa-miR-4787-3p 1 0 0
chr1:153607342|153607537 hsa-miR-3127-3p 1 0 0
chr1:153607342|153607537 hsa-miR-4685-3p 1 0 0
chr1:153607342|153607537 hsa-miR-10396a-3p 1 0 0
chr1:153607342|153607537 hsa-miR-10396b-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6799-3p 1 0 0
chr1:153607342|153607537 hsa-miR-10398-5p 1 0 0
chr1:153607342|153607537 hsa-miR-2682-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6756-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6792-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6862-3p 1 0 0
chr1:153607342|153607537 hsa-miR-10401-3p 1 0 0
chr1:153607342|153607537 hsa-miR-6829-3p 1 0 0
chr1:153607342|153607537 hsa-miR-483-3p 1 0 0
chr1:153607342|153607537 hsa-miR-4691-5p 1 0 0
chr1:153607342|153607537 hsa-miR-6764-5p 1 0 0
chr1:153607342|153607537 hsa-miR-6833-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:153607342|153607537
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MEGEESKGPWVGRRLRREPGESTRAGHQASAWKVWPKGSL
Nucleotide Sequence CTGGAGGGAGAAGAGAGTAAAGGGCCCTGGGTGGGCAGGAGGCTGAGGAGGGAGCCTGGGGAGAGCACCAGGGCGGGGCATCAGGCCAGTGCCTGGAAGGTGTGGCCAAAGGGGTCTCTA
CircID chr1:153607342|153607537
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MGGQEAEEGAWGEHQGGASGQCLEGVAKGVS
Nucleotide Sequence CTGGGTGGGCAGGAGGCTGAGGAGGGAGCCTGGGGAGAGCACCAGGGCGGGGCATCAGGCCAGTGCCTGGAAGGTGTGGCCAAAGGGGTCTCT
CircID chr1:153607342|153607537
ORF Type ORF3
Protein Length 61
Nucleotide Length 183
Protein Sequence MATPSRHWPDAPPWCSPQAPSSASCPPRALYSLLPPDLPLTLAELGSLCECLSLEVPPSLG
Nucleotide Sequence TTGGCCACACCTTCCAGGCACTGGCCTGATGCCCCGCCCTGGTGCTCTCCCCAGGCTCCCTCCTCAGCCTCCTGCCCACCCAGGGCCCTTTACTCTCTTCTCCCTCCAGACCTTCCTCTGACCCTTGCTGAACTGGGGTCCCTTTGTGAGTGTCTCAGTCTAGAGGTACCTCCCTCCCTGGGG
CircID chr1:153607342|153607537
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MMPRPGALPRLPPQPPAHPGPFTLFSLQTFL
Nucleotide Sequence CTGATGCCCCGCCCTGGTGCTCTCCCCAGGCTCCCTCCTCAGCCTCCTGCCCACCCAGGGCCCTTTACTCTCTTCTCCCTCCAGACCTTCCTCTGA
CircID chr1:153607342|153607537
ORF Type ORF5
Protein Length 30
Nucleotide Length 93
Protein Sequence MVLSPGSLLSLLPTQGPLLSSPSRPSSDPC
Nucleotide Sequence CTGGTGCTCTCCCCAGGCTCCCTCCTCAGCCTCCTGCCCACCCAGGGCCCTTTACTCTCTTCTCCCTCCAGACCTTCCTCTGACCCTTGCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab