CircRNA Information

General Information
circRNA Basic Information
CircID chr1:153661241|153661475
Strand -
CircType exon
Host Gene ENSG00000143553.9;
Algorism CIRI2;
Sequence AGCCCGCAGGAGAGCAATGCTGGATTCGGGAATTTACCCCCCTGGCTCCCCAGGCAAATAACAGATGAGCCTATGGACTCAGTAGCACAAGTACTGTTCCCCAGCTGCCTTGTTTCAACAGACATGCAAAGATCCTAGGAGACAGTCCCCATAGACCTTCAGACATTAAAAAGGGAGCCGTACAGTTTGTTTGAAGCACTTCGTCTTACCCATTTATGTAGGGGCCCCAGGAAAC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:153661241|153661475 hsa-miR-208a-5p 0 0 1
chr1:153661241|153661475 hsa-miR-208a-3p 0 0 1
chr1:153661241|153661475 hsa-miR-204-5p 0 0 1
chr1:153661241|153661475 hsa-miR-204-3p 0 0 1
chr1:153661241|153661475 hsa-miR-211-5p 0 0 1
chr1:153661241|153661475 hsa-miR-211-3p 0 0 1
chr1:153661241|153661475 hsa-miR-302a-5p 0 0 1
chr1:153661241|153661475 hsa-miR-302a-3p 0 0 1
chr1:153661241|153661475 hsa-miR-302b-5p 0 0 1
chr1:153661241|153661475 hsa-miR-302b-3p 0 0 1
chr1:153661241|153661475 hsa-miR-302c-5p 0 0 1
chr1:153661241|153661475 hsa-miR-302c-3p 0 0 1
chr1:153661241|153661475 hsa-miR-302d-5p 0 0 1
chr1:153661241|153661475 hsa-miR-302d-3p 0 0 1
chr1:153661241|153661475 hsa-miR-372-5p 0 0 1
chr1:153661241|153661475 hsa-miR-372-3p 0 0 1
chr1:153661241|153661475 hsa-miR-373-5p 0 0 1
chr1:153661241|153661475 hsa-miR-373-3p 0 0 1
chr1:153661241|153661475 hsa-miR-493-5p 0 0 1
chr1:153661241|153661475 hsa-miR-493-3p 0 0 1
chr1:153661241|153661475 hsa-miR-494-5p 0 0 1
chr1:153661241|153661475 hsa-miR-494-3p 0 0 1
chr1:153661241|153661475 hsa-miR-495-5p 0 0 1
chr1:153661241|153661475 hsa-miR-495-3p 0 0 1
chr1:153661241|153661475 hsa-miR-520e-5p 0 0 1
chr1:153661241|153661475 hsa-miR-520e-3p 0 0 1
chr1:153661241|153661475 hsa-miR-520f-5p 0 0 1
chr1:153661241|153661475 hsa-miR-520f-3p 0 0 1
chr1:153661241|153661475 hsa-miR-520b-5p 0 0 1
chr1:153661241|153661475 hsa-miR-520b-3p 0 0 1
chr1:153661241|153661475 hsa-miR-522-5p 0 0 1
chr1:153661241|153661475 hsa-miR-522-3p 0 0 1
chr1:153661241|153661475 hsa-miR-555 0 0 1
chr1:153661241|153661475 hsa-miR-661 0 0 1
chr1:153661241|153661475 hsa-miR-653-5p 0 0 1
chr1:153661241|153661475 hsa-miR-653-3p 0 0 1
chr1:153661241|153661475 hsa-miR-208b-5p 0 0 1
chr1:153661241|153661475 hsa-miR-208b-3p 0 0 1
chr1:153661241|153661475 hsa-miR-939-5p 0 0 1
chr1:153661241|153661475 hsa-miR-939-3p 0 0 1
chr1:153661241|153661475 hsa-miR-548g-5p 0 0 1
chr1:153661241|153661475 hsa-miR-548g-3p 0 0 1
chr1:153661241|153661475 hsa-miR-1267 0 0 1
chr1:153661241|153661475 hsa-miR-302e 0 0 1
chr1:153661241|153661475 hsa-miR-296-5p 0 0 1
chr1:153661241|153661475 hsa-miR-1207-3p 0 0 1
chr1:153661241|153661475 hsa-miR-654-3p 0 0 1
chr1:153661241|153661475 hsa-miR-338-3p 0 0 1
chr1:153661241|153661475 hsa-miR-520d-3p 0 0 1
chr1:153661241|153661475 hsa-miR-520a-3p 0 1 1
chr1:153661241|153661475 hsa-miR-520c-3p 0 0 1
chr1:153661241|153661475 hsa-miR-218 0 0 1
chr1:153661241|153661475 hsa-miR-1254 0 0 1
chr1:153661241|153661475 hsa-miR-101 0 0 1
chr1:153661241|153661475 hsa-miR-637 1 0 0
chr1:153661241|153661475 hsa-miR-920 1 0 0
chr1:153661241|153661475 hsa-miR-2110 1 0 0
chr1:153661241|153661475 hsa-miR-4448 1 0 0
chr1:153661241|153661475 hsa-miR-4506 0 1 0
chr1:153661241|153661475 hsa-miR-4515 1 0 0
chr1:153661241|153661475 hsa-miR-4654 1 0 0
chr1:153661241|153661475 hsa-miR-4734 0 1 0
chr1:153661241|153661475 hsa-miR-4741 1 0 0
chr1:153661241|153661475 hsa-miR-5787 1 0 0
chr1:153661241|153661475 hsa-miR-6081 1 0 0
chr1:153661241|153661475 hsa-miR-6090 1 0 0
chr1:153661241|153661475 hsa-miR-8089 1 1 0
chr1:153661241|153661475 hsa-miR-4731-5p 0 1 0
chr1:153661241|153661475 hsa-miR-210-3p 1 0 0
chr1:153661241|153661475 hsa-miR-6857-5p 1 0 0
chr1:153661241|153661475 hsa-miR-16-1-3p 1 1 0
chr1:153661241|153661475 hsa-miR-1227-5p 1 0 0
chr1:153661241|153661475 hsa-miR-4695-5p 1 0 0
chr1:153661241|153661475 hsa-miR-505-5p 1 1 0
chr1:153661241|153661475 hsa-miR-874-5p 1 0 0
chr1:153661241|153661475 hsa-miR-5589-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6829-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6827-5p 1 1 0
chr1:153661241|153661475 hsa-miR-6810-5p 1 0 0
chr1:153661241|153661475 hsa-miR-1343-3p 1 1 0
chr1:153661241|153661475 hsa-miR-615-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6852-5p 1 1 0
chr1:153661241|153661475 hsa-miR-4640-5p 1 0 0
chr1:153661241|153661475 hsa-miR-193a-5p 1 0 0
chr1:153661241|153661475 hsa-miR-937-5p 1 0 0
chr1:153661241|153661475 hsa-miR-4652-5p 0 1 0
chr1:153661241|153661475 hsa-miR-3675-5p 0 1 0
chr1:153661241|153661475 hsa-miR-3680-3p 0 1 0
chr1:153661241|153661475 hsa-miR-5586-5p 0 1 0
chr1:153661241|153661475 hsa-miR-4763-3p 1 0 0
chr1:153661241|153661475 hsa-miR-1343-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6726-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6763-5p 0 1 0
chr1:153661241|153661475 hsa-miR-328-5p 1 0 0
chr1:153661241|153661475 hsa-miR-4632-5p 1 0 0
chr1:153661241|153661475 hsa-miR-4649-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6795-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6846-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6848-5p 1 0 0
chr1:153661241|153661475 hsa-miR-3199 0 1 0
chr1:153661241|153661475 hsa-miR-365b-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6511a-5p 1 0 0
chr1:153661241|153661475 hsa-miR-4700-5p 0 1 0
chr1:153661241|153661475 hsa-miR-6750-5p 1 0 0
chr1:153661241|153661475 hsa-miR-4667-5p 1 1 0
chr1:153661241|153661475 hsa-miR-10398-5p 1 1 0
chr1:153661241|153661475 hsa-miR-6791-5p 1 0 0
chr1:153661241|153661475 hsa-miR-6762-5p 1 0 0
chr1:153661241|153661475 hsa-miR-10400-3p 1 0 0
chr1:153661241|153661475 hsa-miR-6783-3p 0 1 0
chr1:153661241|153661475 hsa-miR-708-5p 1 0 0
chr1:153661241|153661475 hsa-miR-101-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:153661241|153661475
ORF Type ORF1
Protein Length 29
Nucleotide Length 90
Protein Sequence MPCFNRHAKILGDSPHRPSDIKKGAVQFV
Nucleotide Sequence CTGCCTTGTTTCAACAGACATGCAAAGATCCTAGGAGACAGTCCCCATAGACCTTCAGACATTAAAAAGGGAGCCGTACAGTTTGTTTGA
CircID chr1:153661241|153661475
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MSEGLWGLSPRIFACLLKQGSWGTVLVLLSP
Nucleotide Sequence ATGTCTGAAGGTCTATGGGGACTGTCTCCTAGGATCTTTGCATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCATAG
CircID chr1:153661241|153661475
ORF Type ORF3
Protein Length 41
Nucleotide Length 123
Protein Sequence MSVETRQLGNSTCATESIGSSVICLGSQGGKFPNPALLSCG
Nucleotide Sequence ATGTCTGTTGAAACAAGGCAGCTGGGGAACAGTACTTGTGCTACTGAGTCCATAGGCTCATCTGTTATTTGCCTGGGGAGCCAGGGGGGTAAATTCCCGAATCCAGCATTGCTCTCCTGCGGG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab