CircRNA Information

General Information
circRNA Basic Information
CircID chr1:153728396|153728695
Strand +
CircType exon
Host Gene ENSG00000143624.12;
Algorism CIRI2;
Sequence CTCCCGCTGCTCCCGAAGCAGCTGCTGCTGCTGCCGCCCCTTTTCCCTTCTGCAACTCCATGGCTGCAGCCAGGAGCCGGGAAAAGGTCAGGGAGTGGATGGATGGACAGTCCTAGATATCGGGATCTCTGGATTGCCAGGGACTGGGGGGCAAGAGGAACAAGTTGGGGAGGGGAGAGCAAGGGCCCCTGTCCTCTCCACTCCTCCCTCCTCTCCAAAAGGCCGCGCCTGCGTTGGGGGCGAAGGCACAGTCCTCTGGGTCCTGACTCTGGGGTGGCAGTGCTGAGGGAAAGGCGTTGG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:153728396|153728695 hsa-miR-15a-5p 0 0 1
chr1:153728396|153728695 hsa-miR-15a-3p 0 0 1
chr1:153728396|153728695 hsa-miR-15b-5p 0 0 1
chr1:153728396|153728695 hsa-miR-15b-3p 0 0 1
chr1:153728396|153728695 hsa-miR-185-5p 0 0 1
chr1:153728396|153728695 hsa-miR-185-3p 0 0 1
chr1:153728396|153728695 hsa-miR-195-5p 0 0 1
chr1:153728396|153728695 hsa-miR-195-3p 0 0 1
chr1:153728396|153728695 hsa-miR-424-5p 0 0 1
chr1:153728396|153728695 hsa-miR-424-3p 0 0 1
chr1:153728396|153728695 hsa-miR-497-5p 0 0 1
chr1:153728396|153728695 hsa-miR-497-3p 0 0 1
chr1:153728396|153728695 hsa-miR-503-5p 0 0 1
chr1:153728396|153728695 hsa-miR-503-3p 0 0 1
chr1:153728396|153728695 hsa-miR-604 0 0 1
chr1:153728396|153728695 hsa-miR-614 0 0 1
chr1:153728396|153728695 hsa-miR-620 0 0 1
chr1:153728396|153728695 hsa-miR-646 0 0 1
chr1:153728396|153728695 hsa-miR-647 0 0 1
chr1:153728396|153728695 hsa-miR-765 0 0 1
chr1:153728396|153728695 hsa-miR-298 0 0 1
chr1:153728396|153728695 hsa-miR-1270 0 0 1
chr1:153728396|153728695 hsa-miR-1321 0 0 1
chr1:153728396|153728695 hsa-miR-1184 0 0 1
chr1:153728396|153728695 hsa-miR-525-5p 0 0 1
chr1:153728396|153728695 hsa-miR-361-3p 0 0 1
chr1:153728396|153728695 hsa-miR-520a-5p 0 0 1
chr1:153728396|153728695 hsa-miR-125a-5p 0 0 1
chr1:153728396|153728695 hsa-miR-125b 0 0 1
chr1:153728396|153728695 hsa-miR-550 0 0 1
chr1:153728396|153728695 hsa-miR-642 0 0 1
chr1:153728396|153728695 hsa-miR-16 0 0 1
chr1:153728396|153728695 hsa-miR-768-5p 0 0 1
chr1:153728396|153728695 hsa-miR-940 1 0 0
chr1:153728396|153728695 hsa-miR-1470 1 0 0
chr1:153728396|153728695 hsa-miR-3154 1 0 0
chr1:153728396|153728695 hsa-miR-4312 1 0 0
chr1:153728396|153728695 hsa-miR-4326 1 0 0
chr1:153728396|153728695 hsa-miR-4706 1 0 0
chr1:153728396|153728695 hsa-miR-4739 1 0 0
chr1:153728396|153728695 hsa-miR-5193 1 0 0
chr1:153728396|153728695 hsa-miR-6749-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6836-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6894-5p 1 0 0
chr1:153728396|153728695 hsa-miR-6892-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6875-3p 1 0 0
chr1:153728396|153728695 hsa-miR-4677-5p 1 0 0
chr1:153728396|153728695 hsa-miR-197-5p 1 0 0
chr1:153728396|153728695 hsa-miR-7110-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6841-3p 1 0 0
chr1:153728396|153728695 hsa-miR-1915-5p 1 0 0
chr1:153728396|153728695 hsa-miR-6845-3p 1 0 0
chr1:153728396|153728695 hsa-miR-4655-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6782-5p 1 0 0
chr1:153728396|153728695 hsa-miR-6728-3p 1 0 0
chr1:153728396|153728695 hsa-miR-4713-5p 1 0 0
chr1:153728396|153728695 hsa-miR-4436b-5p 1 0 0
chr1:153728396|153728695 hsa-miR-1247-5p 1 0 0
chr1:153728396|153728695 hsa-miR-6803-3p 1 0 0
chr1:153728396|153728695 hsa-miR-7113-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6771-5p 1 0 0
chr1:153728396|153728695 hsa-miR-642b-5p 1 0 0
chr1:153728396|153728695 hsa-miR-6809-3p 1 0 0
chr1:153728396|153728695 hsa-miR-7111-3p 1 0 0
chr1:153728396|153728695 hsa-miR-4667-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6739-3p 1 0 0
chr1:153728396|153728695 hsa-miR-149-3p 1 0 0
chr1:153728396|153728695 hsa-miR-4646-3p 1 0 0
chr1:153728396|153728695 hsa-miR-1236-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6828-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6887-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6793-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6752-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6826-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6886-3p 1 0 0
chr1:153728396|153728695 hsa-miR-4749-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6795-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6777-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6734-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6812-3p 1 0 0
chr1:153728396|153728695 hsa-miR-1249-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6759-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6780b-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6800-3p 1 0 0
chr1:153728396|153728695 hsa-miR-3162-3p 1 0 0
chr1:153728396|153728695 hsa-miR-7107-5p 1 0 0
chr1:153728396|153728695 hsa-miR-4685-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6738-5p 1 0 0
chr1:153728396|153728695 hsa-miR-6756-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6784-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6805-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6810-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6775-3p 1 0 0
chr1:153728396|153728695 hsa-miR-3059-5p 1 0 0
chr1:153728396|153728695 hsa-miR-483-3p 1 0 0
chr1:153728396|153728695 hsa-miR-6843-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:153728396|153728695
ORF Type ORF1
Protein Length 98
Nucleotide Length 294
Protein Sequence MLPKQLLLLPPLFPSATPWLQPGAGKRSGSGWMDSPRYRDLWIARDWGARGTSWGGESKGPCPLHSSLLSKRPRLRWGRRHSPLGPDSGVAVLRERRW
Nucleotide Sequence CTGCTCCCGAAGCAGCTGCTGCTGCTGCCGCCCCTTTTCCCTTCTGCAACTCCATGGCTGCAGCCAGGAGCCGGGAAAAGGTCAGGGAGTGGATGGATGGACAGTCCTAGATATCGGGATCTCTGGATTGCCAGGGACTGGGGGGCAAGAGGAACAAGTTGGGGAGGGGAGAGCAAGGGCCCCTGTCCTCTCCACTCCTCCCTCCTCTCCAAAAGGCCGCGCCTGCGTTGGGGGCGAAGGCACAGTCCTCTGGGTCCTGACTCTGGGGTGGCAGTGCTGAGGGAAAGGCGTTGG

CircID chr1:153728396|153728695
ORF Type ORF2
Protein Length 78
Nucleotide Length 237
Protein Sequence MQLHGCSQEPGKGQGVDGWTVLDIGISGLPGTGGQEEQVGEGRARAPVLSTPPSSPKGRACVGGEGTVLWVLTLGWQC
Nucleotide Sequence CTGCAACTCCATGGCTGCAGCCAGGAGCCGGGAAAAGGTCAGGGAGTGGATGGATGGACAGTCCTAGATATCGGGATCTCTGGATTGCCAGGGACTGGGGGGCAAGAGGAACAAGTTGGGGAGGGGAGAGCAAGGGCCCCTGTCCTCTCCACTCCTCCCTCCTCTCCAAAAGGCCGCGCCTGCGTTGGGGGCGAAGGCACAGTCCTCTGGGTCCTGACTCTGGGGTGGCAGTGCTGA

CircID chr1:153728396|153728695
ORF Type ORF3
Protein Length 45
Nucleotide Length 138
Protein Sequence MDCQGLGGKRNKLGRGEQGPLSSPLLPPLQKAAPALGAKAQSSGS
Nucleotide Sequence CTGGATTGCCAGGGACTGGGGGGCAAGAGGAACAAGTTGGGGAGGGGAGAGCAAGGGCCCCTGTCCTCTCCACTCCTCCCTCCTCTCCAAAAGGCCGCGCCTGCGTTGGGGGCGAAGGCACAGTCCTCTGGGTCCTGA

CircID chr1:153728396|153728695
ORF Type ORF4
Protein Length 83
Nucleotide Length 249
Protein Sequence MCLRPQRRRGLLERREEWRGQGPLLSPPQLVPLAPQSLAIQRSRYLGLSIHPLPDLFPAPGCSHGVAEGKRGGSSSSCFGSSG
Nucleotide Sequence CTGTGCCTTCGCCCCCAACGCAGGCGCGGCCTTTTGGAGAGGAGGGAGGAGTGGAGAGGACAGGGGCCCTTGCTCTCCCCTCCCCAACTTGTTCCTCTTGCCCCCCAGTCCCTGGCAATCCAGAGATCCCGATATCTAGGACTGTCCATCCATCCACTCCCTGACCTTTTCCCGGCTCCTGGCTGCAGCCATGGAGTTGCAGAAGGGAAAAGGGGCGGCAGCAGCAGCAGCTGCTTCGGGAGCAGCGGG

CircID chr1:153728396|153728695
ORF Type ORF5
Protein Length 55
Nucleotide Length 168
Protein Sequence MPPQSQDPEDCAFAPNAGAAFWRGGRSGEDRGPCSPLPNLFLLPPSPWQSRDPDI
Nucleotide Sequence CTGCCACCCCAGAGTCAGGACCCAGAGGACTGTGCCTTCGCCCCCAACGCAGGCGCGGCCTTTTGGAGAGGAGGGAGGAGTGGAGAGGACAGGGGCCCTTGCTCTCCCCTCCCCAACTTGTTCCTCTTGCCCCCCAGTCCCTGGCAATCCAGAGATCCCGATATCTAG

CircID chr1:153728396|153728695
ORF Type ORF6
Protein Length 30
Nucleotide Length 90
Protein Sequence MTFSRLLAAAMELQKGKGAAAAAAASGAAG
Nucleotide Sequence CTGACCTTTTCCCGGCTCCTGGCTGCAGCCATGGAGTTGCAGAAGGGAAAAGGGGCGGCAGCAGCAGCAGCTGCTTCGGGAGCAGCGGGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites