CircRNA Information

General Information
circRNA Basic Information
CircID chr1:153773222|153773597
Strand -
CircType exon
Host Gene ENSG00000143624.12;
Algorism CIRI2;
Sequence CAAGCGGAAACGAAAAGGGTCCTCTGCAGTGGGCTCTGACAGTGACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTGCCCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGCTGAGGAGATTGCAGGGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTTCCGCAATCTCCTCCCCCAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:153773222|153773597 hsa-miR-107 0 0 1
chr1:153773222|153773597 hsa-miR-149-5p 0 0 1
chr1:153773222|153773597 hsa-miR-149-3p 0 0 1
chr1:153773222|153773597 hsa-miR-572 0 0 1
chr1:153773222|153773597 hsa-miR-608 1 1 1
chr1:153773222|153773597 hsa-miR-609 0 1 1
chr1:153773222|153773597 hsa-miR-617 0 0 1
chr1:153773222|153773597 hsa-miR-625-5p 0 0 1
chr1:153773222|153773597 hsa-miR-625-3p 0 0 1
chr1:153773222|153773597 hsa-miR-637 1 1 1
chr1:153773222|153773597 hsa-miR-650 0 0 1
chr1:153773222|153773597 hsa-miR-765 1 1 1
chr1:153773222|153773597 hsa-miR-665 1 1 1
chr1:153773222|153773597 hsa-miR-920 0 1 1
chr1:153773222|153773597 hsa-miR-939-5p 0 0 1
chr1:153773222|153773597 hsa-miR-939-3p 0 0 1
chr1:153773222|153773597 hsa-miR-1208 0 0 1
chr1:153773222|153773597 hsa-miR-1294 0 0 1
chr1:153773222|153773597 hsa-miR-1275 0 1 1
chr1:153773222|153773597 hsa-miR-1292-5p 0 0 1
chr1:153773222|153773597 hsa-miR-1292-3p 0 0 1
chr1:153773222|153773597 hsa-miR-513c-5p 0 0 1
chr1:153773222|153773597 hsa-miR-513c-3p 0 0 1
chr1:153773222|153773597 hsa-miR-512-5p 0 1 1
chr1:153773222|153773597 hsa-miR-1224-5p 0 0 1
chr1:153773222|153773597 hsa-miR-885-3p 0 0 1
chr1:153773222|153773597 hsa-miR-423-5p 0 1 1
chr1:153773222|153773597 hsa-miR-331-3p 0 0 1
chr1:153773222|153773597 hsa-miR-34c-3p 0 0 1
chr1:153773222|153773597 hsa-miR-455-3p 0 0 1
chr1:153773222|153773597 hsa-miR-509-3-5p 0 0 1
chr1:153773222|153773597 hsa-miR-509-5p 0 0 1
chr1:153773222|153773597 hsa-miR-371-5p 0 0 1
chr1:153773222|153773597 hsa-miR-103 0 0 1
chr1:153773222|153773597 hsa-miR-638 1 0 0
chr1:153773222|153773597 hsa-miR-663a 1 0 0
chr1:153773222|153773597 hsa-miR-658 1 0 0
chr1:153773222|153773597 hsa-miR-762 1 1 0
chr1:153773222|153773597 hsa-miR-940 1 0 0
chr1:153773222|153773597 hsa-miR-1268a 1 0 0
chr1:153773222|153773597 hsa-miR-4298 1 0 0
chr1:153773222|153773597 hsa-miR-4268 0 1 0
chr1:153773222|153773597 hsa-miR-4264 0 1 0
chr1:153773222|153773597 hsa-miR-3652 0 1 0
chr1:153773222|153773597 hsa-miR-3918 0 1 0
chr1:153773222|153773597 hsa-miR-3936 1 0 0
chr1:153773222|153773597 hsa-miR-1268b 1 0 0
chr1:153773222|153773597 hsa-miR-4453 0 1 0
chr1:153773222|153773597 hsa-miR-4489 0 1 0
chr1:153773222|153773597 hsa-miR-4492 0 1 0
chr1:153773222|153773597 hsa-miR-4512 1 1 0
chr1:153773222|153773597 hsa-miR-4516 1 0 0
chr1:153773222|153773597 hsa-miR-4519 0 1 0
chr1:153773222|153773597 hsa-miR-4538 0 1 0
chr1:153773222|153773597 hsa-miR-4651 1 1 0
chr1:153773222|153773597 hsa-miR-4654 0 1 0
chr1:153773222|153773597 hsa-miR-4656 1 1 0
chr1:153773222|153773597 hsa-miR-4689 1 0 0
chr1:153773222|153773597 hsa-miR-4706 1 0 0
chr1:153773222|153773597 hsa-miR-4721 1 0 0
chr1:153773222|153773597 hsa-miR-4739 1 1 0
chr1:153773222|153773597 hsa-miR-4741 1 0 0
chr1:153773222|153773597 hsa-miR-4784 0 1 0
chr1:153773222|153773597 hsa-miR-5090 1 0 0
chr1:153773222|153773597 hsa-miR-5100 0 1 0
chr1:153773222|153773597 hsa-miR-5698 1 1 0
chr1:153773222|153773597 hsa-miR-5787 1 0 0
chr1:153773222|153773597 hsa-miR-6069 0 1 0
chr1:153773222|153773597 hsa-miR-6081 1 0 0
chr1:153773222|153773597 hsa-miR-6085 1 1 0
chr1:153773222|153773597 hsa-miR-6086 0 1 0
chr1:153773222|153773597 hsa-miR-6090 1 0 0
chr1:153773222|153773597 hsa-miR-6127 1 1 0
chr1:153773222|153773597 hsa-miR-6133 1 1 0
chr1:153773222|153773597 hsa-miR-6165 1 0 0
chr1:153773222|153773597 hsa-miR-8089 1 1 0
chr1:153773222|153773597 hsa-miR-12118 0 1 0
chr1:153773222|153773597 hsa-miR-370-3p 1 0 0
chr1:153773222|153773597 hsa-miR-4433b-3p 1 0 0
chr1:153773222|153773597 hsa-miR-4731-5p 1 1 0
chr1:153773222|153773597 hsa-miR-504-3p 1 0 0
chr1:153773222|153773597 hsa-miR-3157-5p 0 1 0
chr1:153773222|153773597 hsa-miR-671-5p 1 0 0
chr1:153773222|153773597 hsa-miR-7106-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6825-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6894-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6857-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6720-5p 1 0 0
chr1:153773222|153773597 hsa-miR-766-3p 1 0 0
chr1:153773222|153773597 hsa-miR-6799-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6728-5p 0 1 0
chr1:153773222|153773597 hsa-miR-1227-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6089 1 0 0
chr1:153773222|153773597 hsa-miR-6880-5p 1 0 0
chr1:153773222|153773597 hsa-miR-7847-3p 0 1 0
chr1:153773222|153773597 hsa-miR-874-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6721-5p 1 0 0
chr1:153773222|153773597 hsa-miR-4655-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6742-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6716-5p 1 0 0
chr1:153773222|153773597 hsa-miR-3180-3p 1 0 0
chr1:153773222|153773597 hsa-miR-6796-5p 1 0 0
chr1:153773222|153773597 hsa-miR-185-3p 1 1 0
chr1:153773222|153773597 hsa-miR-6732-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6798-5p 1 1 0
chr1:153773222|153773597 hsa-miR-2467-3p 0 1 0
chr1:153773222|153773597 hsa-miR-6782-5p 1 1 0
chr1:153773222|153773597 hsa-miR-3150b-3p 0 1 0
chr1:153773222|153773597 hsa-miR-6810-5p 1 0 0
chr1:153773222|153773597 hsa-miR-5008-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6850-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6786-5p 1 0 0
chr1:153773222|153773597 hsa-miR-7109-5p 1 1 0
chr1:153773222|153773597 hsa-miR-1226-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6740-5p 0 1 0
chr1:153773222|153773597 hsa-miR-204-3p 0 1 0
chr1:153773222|153773597 hsa-miR-4640-5p 1 1 0
chr1:153773222|153773597 hsa-miR-4787-5p 1 1 0
chr1:153773222|153773597 hsa-miR-4446-5p 0 1 0
chr1:153773222|153773597 hsa-miR-3616-3p 1 1 0
chr1:153773222|153773597 hsa-miR-6824-5p 1 0 0
chr1:153773222|153773597 hsa-miR-3158-3p 0 1 0
chr1:153773222|153773597 hsa-miR-744-5p 1 0 0
chr1:153773222|153773597 hsa-miR-4746-5p 1 0 0
chr1:153773222|153773597 hsa-miR-181d-3p 0 1 0
chr1:153773222|153773597 hsa-miR-1233-5p 1 0 0
chr1:153773222|153773597 hsa-miR-4763-3p 1 0 0
chr1:153773222|153773597 hsa-miR-6769b-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6778-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6787-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6812-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6816-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6870-5p 1 1 0
chr1:153773222|153773597 hsa-miR-5001-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6726-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6743-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6752-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6756-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6769a-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6803-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6813-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6819-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6851-5p 1 0 0
chr1:153773222|153773597 hsa-miR-7107-5p 1 0 0
chr1:153773222|153773597 hsa-miR-7110-5p 1 1 0
chr1:153773222|153773597 hsa-miR-11181-3p 1 1 0
chr1:153773222|153773597 hsa-miR-1249-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6751-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6779-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6780a-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6797-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6879-5p 0 1 0
chr1:153773222|153773597 hsa-miR-7111-5p 1 1 0
chr1:153773222|153773597 hsa-miR-3620-5p 1 0 0
chr1:153773222|153773597 hsa-miR-4728-5p 1 1 0
chr1:153773222|153773597 hsa-miR-5196-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6780b-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6836-5p 1 1 0
chr1:153773222|153773597 hsa-miR-10396a-5p 1 0 0
chr1:153773222|153773597 hsa-miR-10396b-5p 1 0 0
chr1:153773222|153773597 hsa-miR-1237-5p 1 0 0
chr1:153773222|153773597 hsa-miR-1909-3p 1 0 0
chr1:153773222|153773597 hsa-miR-328-5p 1 1 0
chr1:153773222|153773597 hsa-miR-4632-5p 1 1 0
chr1:153773222|153773597 hsa-miR-4649-5p 1 0 0
chr1:153773222|153773597 hsa-miR-4725-3p 1 0 0
chr1:153773222|153773597 hsa-miR-4726-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6729-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6794-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6795-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6846-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6848-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6858-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6889-5p 1 0 0
chr1:153773222|153773597 hsa-miR-4723-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6845-5p 0 1 0
chr1:153773222|153773597 hsa-miR-4769-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6731-5p 1 0 0
chr1:153773222|153773597 hsa-miR-7843-5p 0 1 0
chr1:153773222|153773597 hsa-miR-4665-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6877-3p 0 1 0
chr1:153773222|153773597 hsa-miR-4700-5p 0 1 0
chr1:153773222|153773597 hsa-miR-3173-3p 0 1 0
chr1:153773222|153773597 hsa-miR-3679-5p 1 0 0
chr1:153773222|153773597 hsa-miR-4646-5p 1 1 0
chr1:153773222|153773597 hsa-miR-4747-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6876-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6891-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6750-5p 1 1 0
chr1:153773222|153773597 hsa-miR-6766-5p 1 0 0
chr1:153773222|153773597 hsa-miR-4667-5p 0 1 0
chr1:153773222|153773597 hsa-miR-3184-5p 1 0 0
chr1:153773222|153773597 hsa-miR-6753-3p 1 0 0
chr1:153773222|153773597 hsa-miR-6762-5p 0 1 0
chr1:153773222|153773597 hsa-miR-6810-3p 0 1 0
chr1:153773222|153773597 hsa-miR-6819-3p 0 1 0
chr1:153773222|153773597 hsa-miR-6823-3p 0 1 0
chr1:153773222|153773597 hsa-miR-4690-3p 1 0 0
chr1:153773222|153773597 hsa-miR-3129-5p 0 1 0
chr1:153773222|153773597 hsa-miR-4704-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:153773222|153773597
ORF Type ORF1
Protein Length 51
Nucleotide Length 156
Protein Sequence MRPCIPHPTPGWTALSFLVIQRLIEAEEIAGETPLLHPQAPPVEGGAFSSG
Nucleotide Sequence CTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTGCCCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGCTGAGGAGATTGCAGGGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGA
CircID chr1:153773222|153773597
ORF Type ORF2
Protein Length 53
Nucleotide Length 159
Protein Sequence MQPLAPSLLLGPPAPHTAVPSDIWDLTEARGSVKSDHSGSPQPPGPFRNLLPQ
Nucleotide Sequence ATGCAGCCCCTAGCCCCTTCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCTGTTCCCAGTGATATTTGGGATCTGACTGAAGCCAGAGGCTCTGTAAAATCAGACCATAGTGGAAGTCCTCAGCCCCCTGGCCCCTTCCGCAATCTCCTCCCCCAG
CircID chr1:153773222|153773597
ORF Type ORF3
Protein Length 35
Nucleotide Length 108
Protein Sequence MRRLQGKHPCCIPKLPRWKEELSPLAEFEKLPCSP
Nucleotide Sequence CTGAGGAGATTGCAGGGGAAACACCCTTGCTGCATCCCCAAGCTCCCCCGGTGGAAGGAGGAGCTTTCTCCTCTGGCTGAGTTTGAGAAGCTGCCATGCAGCCCCTAG
CircID chr1:153773222|153773597
ORF Type ORF4
Protein Length 33
Nucleotide Length 102
Protein Sequence MQWALTVTEALHSPSHPRLDCPLLLGDSKVNRG
Nucleotide Sequence CTGCAGTGGGCTCTGACAGTGACTGAGGCCCTGCATTCCCCATCCCACCCCCGGCTGGACTGCCCTCTCCTTCTTGGTGATTCAAAGGTTAATAGAGGCTGA
CircID chr1:153773222|153773597
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MSLRSCHAAPSPFPPPGASSPSHCCSQ
Nucleotide Sequence CTGAGTTTGAGAAGCTGCCATGCAGCCCCTAGCCCCTTCCCTCCTCCTGGGGCCTCCAGCCCCTCACACTGCTGTTCCCAGTGA
CircID chr1:153773222|153773597
ORF Type ORF6
Protein Length 107
Nucleotide Length 321
Protein Sequence MILQSLWLQSDPKYHWEQQCEGLEAPGGGKGLGAAWQLLKLSQRRKLLLPPGELGDAARVFPLQSPQPLLTFESPRRRGQSSRGWDGECRASVTVRAHCRGPFSFPL
Nucleotide Sequence CTGATTTTACAGAGCCTCTGGCTTCAGTCAGATCCCAAATATCACTGGGAACAGCAGTGTGAGGGGCTGGAGGCCCCAGGAGGAGGGAAGGGGCTAGGGGCTGCATGGCAGCTTCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCTGCAATCTCCTCAGCCTCTATTAACCTTTGAATCACCAAGAAGGAGAGGGCAGTCCAGCCGGGGGTGGGATGGGGAATGCAGGGCCTCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTT
CircID chr1:153773222|153773597
ORF Type ORF7
Protein Length 36
Nucleotide Length 111
Protein Sequence MHGSFSNSARGESSSFHRGSLGMQQGCFPCNLLSLY
Nucleotide Sequence CTGCATGGCAGCTTCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCTGCAATCTCCTCAGCCTCTATTAA
CircID chr1:153773222|153773597
ORF Type ORF8
Protein Length 36
Nucleotide Length 108
Protein Sequence MNHQEGEGSPAGGGMGNAGPQSLSEPTAEDPFRFRL
Nucleotide Sequence TTGAATCACCAAGAAGGAGAGGGCAGTCCAGCCGGGGGTGGGATGGGGAATGCAGGGCCTCAGTCACTGTCAGAGCCCACTGCAGAGGACCCTTTTCGTTTCCGCTTG
CircID chr1:153773222|153773597
ORF Type ORF9
Protein Length 37
Nucleotide Length 114
Protein Sequence MAASQTQPEEKAPPSTGGAWGCSKGVSPAISSASINL
Nucleotide Sequence ATGGCAGCTTCTCAAACTCAGCCAGAGGAGAAAGCTCCTCCTTCCACCGGGGGAGCTTGGGGATGCAGCAAGGGTGTTTCCCCTGCAATCTCCTCAGCCTCTATTAACCTTTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab