CircRNA Information

General Information
circRNA Basic Information
CircID chr1:153778815|153779165
Strand -
CircType exon
Host Gene ENSG00000143554.12;
Algorism CIRI2;
Sequence ACTGGGGACCTGCTGGTCTGCGATGACCAAGGTTTTCTCCGCTTCCATGATCGTACTGGAGACACCTTCAGGTATCTGTCCATAACTGGTTTTTCATCCTGGACATCTGATCTCTGTGATCCAAAGCTTCTGAACCTCAACTCTCTAATCTGCCACCTCAACCTGGGTCCTAAGCTAATCTCTCATTCTCAGATCTCACCATTTCATCCCTGTGACACTGACCTCTGACCTCATCTCCCCACCAAGCCCATAAGGCCCTGACCCCTGACTCCCAGTTTCAGATCTCTGCTCTCTGACAGGTGGAAGGGGGAGAATGTGGCCACAACCGAGGTGGCAGAGGTCTTCGAGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:153778815|153779165 hsa-miR-21-5p 0 0 1
chr1:153778815|153779165 hsa-miR-21-3p 0 0 1
chr1:153778815|153779165 hsa-miR-198 0 0 1
chr1:153778815|153779165 hsa-miR-214-5p 0 0 1
chr1:153778815|153779165 hsa-miR-214-3p 0 0 1
chr1:153778815|153779165 hsa-miR-143-5p 0 0 1
chr1:153778815|153779165 hsa-miR-143-3p 0 0 1
chr1:153778815|153779165 hsa-miR-383-5p 0 0 1
chr1:153778815|153779165 hsa-miR-383-3p 0 0 1
chr1:153778815|153779165 hsa-miR-493-5p 0 0 1
chr1:153778815|153779165 hsa-miR-493-3p 0 0 1
chr1:153778815|153779165 hsa-miR-522-5p 0 0 1
chr1:153778815|153779165 hsa-miR-522-3p 0 0 1
chr1:153778815|153779165 hsa-miR-580-5p 0 0 1
chr1:153778815|153779165 hsa-miR-580-3p 0 0 1
chr1:153778815|153779165 hsa-miR-588 0 0 1
chr1:153778815|153779165 hsa-miR-597-5p 0 0 1
chr1:153778815|153779165 hsa-miR-597-3p 0 0 1
chr1:153778815|153779165 hsa-miR-634 0 0 1
chr1:153778815|153779165 hsa-miR-766-5p 0 0 1
chr1:153778815|153779165 hsa-miR-766-3p 0 0 1
chr1:153778815|153779165 hsa-miR-541-5p 0 0 1
chr1:153778815|153779165 hsa-miR-541-3p 0 0 1
chr1:153778815|153779165 hsa-miR-665 0 0 1
chr1:153778815|153779165 hsa-miR-939-5p 0 0 1
chr1:153778815|153779165 hsa-miR-939-3p 0 0 1
chr1:153778815|153779165 hsa-miR-663b 0 0 1
chr1:153778815|153779165 hsa-miR-1303 0 0 1
chr1:153778815|153779165 hsa-miR-671-5p 0 0 1
chr1:153778815|153779165 hsa-miR-770-5p 0 1 1
chr1:153778815|153779165 hsa-miR-491-5p 0 0 1
chr1:153778815|153779165 hsa-miR-654-5p 0 0 1
chr1:153778815|153779165 hsa-miR-490-5p 0 0 1
chr1:153778815|153779165 hsa-miR-513a-5p 0 0 1
chr1:153778815|153779165 hsa-miR-590-5p 0 0 1
chr1:153778815|153779165 hsa-miR-548d-3p 0 0 1
chr1:153778815|153779165 hsa-miR-220c 0 0 1
chr1:153778815|153779165 hsa-miR-203 0 0 1
chr1:153778815|153779165 hsa-miR-219-1-3p 0 0 1
chr1:153778815|153779165 hsa-miR-608 1 0 0
chr1:153778815|153779165 hsa-miR-658 1 0 0
chr1:153778815|153779165 hsa-miR-1182 1 0 0
chr1:153778815|153779165 hsa-miR-1268a 1 0 0
chr1:153778815|153779165 hsa-miR-711 1 1 0
chr1:153778815|153779165 hsa-miR-2861 1 0 0
chr1:153778815|153779165 hsa-miR-3132 1 0 0
chr1:153778815|153779165 hsa-miR-3175 1 0 0
chr1:153778815|153779165 hsa-miR-3196 1 0 0
chr1:153778815|153779165 hsa-miR-4270 1 0 0
chr1:153778815|153779165 hsa-miR-4271 1 0 0
chr1:153778815|153779165 hsa-miR-4281 1 0 0
chr1:153778815|153779165 hsa-miR-1268b 1 0 0
chr1:153778815|153779165 hsa-miR-4493 0 1 0
chr1:153778815|153779165 hsa-miR-4518 1 0 0
chr1:153778815|153779165 hsa-miR-4651 1 0 0
chr1:153778815|153779165 hsa-miR-4656 1 0 0
chr1:153778815|153779165 hsa-miR-4669 1 0 0
chr1:153778815|153779165 hsa-miR-4739 1 0 0
chr1:153778815|153779165 hsa-miR-5572 1 0 0
chr1:153778815|153779165 hsa-miR-5787 1 0 0
chr1:153778815|153779165 hsa-miR-6075 1 0 0
chr1:153778815|153779165 hsa-miR-6088 0 1 0
chr1:153778815|153779165 hsa-miR-6134 1 1 0
chr1:153778815|153779165 hsa-miR-7150 1 0 0
chr1:153778815|153779165 hsa-miR-8085 1 0 0
chr1:153778815|153779165 hsa-miR-8089 1 0 0
chr1:153778815|153779165 hsa-miR-12114 1 0 0
chr1:153778815|153779165 hsa-miR-12122 0 1 0
chr1:153778815|153779165 hsa-miR-12127 1 1 0
chr1:153778815|153779165 hsa-miR-504-3p 1 0 0
chr1:153778815|153779165 hsa-miR-6765-5p 1 0 0
chr1:153778815|153779165 hsa-miR-3150a-3p 1 1 0
chr1:153778815|153779165 hsa-miR-7106-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6825-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6894-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6857-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6799-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6728-5p 1 0 0
chr1:153778815|153779165 hsa-miR-7851-3p 1 0 0
chr1:153778815|153779165 hsa-miR-5187-5p 1 1 0
chr1:153778815|153779165 hsa-miR-6089 1 0 0
chr1:153778815|153779165 hsa-miR-6757-5p 0 1 0
chr1:153778815|153779165 hsa-miR-6880-5p 1 0 0
chr1:153778815|153779165 hsa-miR-7847-3p 1 0 0
chr1:153778815|153779165 hsa-miR-4695-5p 1 0 0
chr1:153778815|153779165 hsa-miR-197-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6871-5p 1 0 0
chr1:153778815|153779165 hsa-miR-3151-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6793-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6798-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6782-5p 1 0 0
chr1:153778815|153779165 hsa-miR-3156-5p 1 1 0
chr1:153778815|153779165 hsa-miR-3150b-3p 1 0 0
chr1:153778815|153779165 hsa-miR-6786-5p 1 0 0
chr1:153778815|153779165 hsa-miR-5088-5p 1 0 0
chr1:153778815|153779165 hsa-miR-1226-5p 1 0 0
chr1:153778815|153779165 hsa-miR-4738-3p 0 1 0
chr1:153778815|153779165 hsa-miR-4640-5p 1 0 0
chr1:153778815|153779165 hsa-miR-4715-3p 0 1 0
chr1:153778815|153779165 hsa-miR-3127-5p 0 1 0
chr1:153778815|153779165 hsa-miR-4732-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6847-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6821-3p 0 1 0
chr1:153778815|153779165 hsa-miR-2681-3p 0 1 0
chr1:153778815|153779165 hsa-miR-193a-5p 1 0 0
chr1:153778815|153779165 hsa-miR-937-5p 1 0 0
chr1:153778815|153779165 hsa-miR-3162-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6828-5p 1 0 0
chr1:153778815|153779165 hsa-miR-5010-5p 1 0 0
chr1:153778815|153779165 hsa-miR-7162-3p 1 0 0
chr1:153778815|153779165 hsa-miR-6832-5p 1 0 0
chr1:153778815|153779165 hsa-miR-2276-5p 0 1 0
chr1:153778815|153779165 hsa-miR-6801-5p 1 1 0
chr1:153778815|153779165 hsa-miR-6759-3p 1 0 0
chr1:153778815|153779165 hsa-miR-219b-5p 0 1 0
chr1:153778815|153779165 hsa-miR-4520-3p 0 1 0
chr1:153778815|153779165 hsa-miR-1207-5p 1 0 0
chr1:153778815|153779165 hsa-miR-4763-3p 1 0 0
chr1:153778815|153779165 hsa-miR-6769b-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6778-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6812-5p 1 1 0
chr1:153778815|153779165 hsa-miR-6865-5p 1 1 0
chr1:153778815|153779165 hsa-miR-6870-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6893-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6775-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6726-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6737-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6756-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6803-5p 1 1 0
chr1:153778815|153779165 hsa-miR-6815-5p 1 1 0
chr1:153778815|153779165 hsa-miR-6819-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6851-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6722-3p 1 0 0
chr1:153778815|153779165 hsa-miR-6751-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6763-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6779-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6879-5p 1 0 0
chr1:153778815|153779165 hsa-miR-3127-3p 0 1 0
chr1:153778815|153779165 hsa-miR-1915-3p 1 0 0
chr1:153778815|153779165 hsa-miR-4728-5p 1 0 0
chr1:153778815|153779165 hsa-miR-1237-5p 1 0 0
chr1:153778815|153779165 hsa-miR-328-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6735-5p 1 0 0
chr1:153778815|153779165 hsa-miR-675-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6777-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6795-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6858-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6887-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6889-5p 1 1 0
chr1:153778815|153779165 hsa-miR-4723-5p 0 1 0
chr1:153778815|153779165 hsa-miR-6831-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6731-5p 1 0 0
chr1:153778815|153779165 hsa-miR-6756-3p 0 1 0
chr1:153778815|153779165 hsa-miR-6529-5p 0 1 0
chr1:153778815|153779165 hsa-miR-5579-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:153778815|153779165
ORF Type ORF1
Protein Length 72
Nucleotide Length 219
Protein Sequence MLVCDDQGFLRFHDRTGDTFRYLSITGFSSWTSDLCDPKLLNLNSLICHLNLGPKLISHSQISPFHPCDTDL
Nucleotide Sequence CTGCTGGTCTGCGATGACCAAGGTTTTCTCCGCTTCCATGATCGTACTGGAGACACCTTCAGGTATCTGTCCATAACTGGTTTTTCATCCTGGACATCTGATCTCTGTGATCCAAAGCTTCTGAACCTCAACTCTCTAATCTGCCACCTCAACCTGGGTCCTAAGCTAATCTCTCATTCTCAGATCTCACCATTTCATCCCTGTGACACTGACCTCTGA
CircID chr1:153778815|153779165
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MTPSFRSLLSDRWKGENVATTEVAEVFEA
Nucleotide Sequence CTGACTCCCAGTTTCAGATCTCTGCTCTCTGACAGGTGGAAGGGGGAGAATGTGGCCACAACCGAGGTGGCAGAGGTCTTCGAGGCC
CircID chr1:153778815|153779165
ORF Type ORF3
Protein Length 27
Nucleotide Length 84
Protein Sequence LGTCWSAMTKVFSASMIVLETPSGICP
Nucleotide Sequence CTGGGGACCTGCTGGTCTGCGATGACCAAGGTTTTCTCCGCTTCCATGATCGTACTGGAGACACCTTCAGGTATCTGTCCATAA
CircID chr1:153778815|153779165
ORF Type ORF4
Protein Length 53
Nucleotide Length 159
Protein Sequence MRWQIRELRFRSFGSQRSDVQDEKPVMDRYLKVSPVRSWKRRKPWSSQTSRSP
Nucleotide Sequence TTGAGGTGGCAGATTAGAGAGTTGAGGTTCAGAAGCTTTGGATCACAGAGATCAGATGTCCAGGATGAAAAACCAGTTATGGACAGATACCTGAAGGTGTCTCCAGTACGATCATGGAAGCGGAGAAAACCTTGGTCATCGCAGACCAGCAGGTCCCCA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab