CircRNA Information

General Information
circRNA Basic Information
CircID chr1:154273536|154273886
Strand +
CircType exon
Host Gene ENSG00000143575.13;
Algorism CIRI2;
Sequence CCCCCCAAAGATCCTGGGCTGGTGACTATCTGGATACTTAAGCATTGAGTCCCGAAGTGTCTGTCCCTCCCGTAGTCTCTCACCAGGTGTCTCTGACTCAGGACCTGGAAGTTCTGCAGAAAGGTGGCAGGTGTTTGCTGGGATGGGAAAGGACTTGGGCTCTATTAATCTCTCTGAAATCATCAGTCTTCTCACACTTCCCATCCCCCAGCTACTCCCTGCAGGCTCTTTATTTCACCCACCAACCCACCAGAAACCACAGGTTGCCCCTTAGGGAAAGCCACACACCAGGAGGATGGGAAGGCAAGGTCCAGGCCCCCATATCGCTGAAGATGCTATTGAAATCTCGTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:154273536|154273886 hsa-miR-492 0 0 1
chr1:154273536|154273886 hsa-miR-545-5p 0 0 1
chr1:154273536|154273886 hsa-miR-545-3p 0 0 1
chr1:154273536|154273886 hsa-miR-583 0 0 1
chr1:154273536|154273886 hsa-miR-595 0 0 1
chr1:154273536|154273886 hsa-miR-596 0 0 1
chr1:154273536|154273886 hsa-miR-625-5p 0 0 1
chr1:154273536|154273886 hsa-miR-625-3p 0 0 1
chr1:154273536|154273886 hsa-miR-633 0 0 1
chr1:154273536|154273886 hsa-miR-637 1 1 1
chr1:154273536|154273886 hsa-miR-649 0 0 1
chr1:154273536|154273886 hsa-miR-298 0 0 1
chr1:154273536|154273886 hsa-miR-541-5p 0 0 1
chr1:154273536|154273886 hsa-miR-541-3p 0 0 1
chr1:154273536|154273886 hsa-miR-1226-5p 0 0 1
chr1:154273536|154273886 hsa-miR-1226-3p 0 0 1
chr1:154273536|154273886 hsa-miR-1200 0 0 1
chr1:154273536|154273886 hsa-miR-1205 0 1 1
chr1:154273536|154273886 hsa-miR-1253 0 0 1
chr1:154273536|154273886 hsa-miR-1262 0 0 1
chr1:154273536|154273886 hsa-miR-1275 0 0 1
chr1:154273536|154273886 hsa-miR-1276 1 1 1
chr1:154273536|154273886 hsa-miR-1184 0 0 1
chr1:154273536|154273886 hsa-miR-654-5p 1 0 1
chr1:154273536|154273886 hsa-miR-9 0 0 1
chr1:154273536|154273886 hsa-miR-644 0 0 1
chr1:154273536|154273886 hsa-miR-1300 0 0 1
chr1:154273536|154273886 hsa-miR-544 0 0 1
chr1:154273536|154273886 hsa-miR-1254 0 0 1
chr1:154273536|154273886 hsa-miR-147 0 0 1
chr1:154273536|154273886 hsa-miR-923 0 0 1
chr1:154273536|154273886 hsa-miR-608 1 0 0
chr1:154273536|154273886 hsa-miR-644a 0 1 0
chr1:154273536|154273886 hsa-miR-3131 1 0 0
chr1:154273536|154273886 hsa-miR-4297 0 1 0
chr1:154273536|154273886 hsa-miR-4270 1 1 0
chr1:154273536|154273886 hsa-miR-3689c 0 1 0
chr1:154273536|154273886 hsa-miR-4507 1 1 0
chr1:154273536|154273886 hsa-miR-4525 0 1 0
chr1:154273536|154273886 hsa-miR-1587 1 0 0
chr1:154273536|154273886 hsa-miR-4688 1 0 0
chr1:154273536|154273886 hsa-miR-4689 1 0 0
chr1:154273536|154273886 hsa-miR-4706 0 1 0
chr1:154273536|154273886 hsa-miR-5186 1 1 0
chr1:154273536|154273886 hsa-miR-5685 0 1 0
chr1:154273536|154273886 hsa-miR-5787 1 1 0
chr1:154273536|154273886 hsa-miR-6127 1 0 0
chr1:154273536|154273886 hsa-miR-6745 1 0 0
chr1:154273536|154273886 hsa-miR-7977 0 1 0
chr1:154273536|154273886 hsa-miR-7978 0 1 0
chr1:154273536|154273886 hsa-miR-8058 0 1 0
chr1:154273536|154273886 hsa-miR-9900 0 1 0
chr1:154273536|154273886 hsa-miR-4433b-3p 1 0 0
chr1:154273536|154273886 hsa-miR-7-5p 0 1 0
chr1:154273536|154273886 hsa-miR-6840-3p 0 1 0
chr1:154273536|154273886 hsa-miR-29b-2-5p 0 1 0
chr1:154273536|154273886 hsa-miR-6799-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6728-5p 1 0 0
chr1:154273536|154273886 hsa-miR-7114-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6741-5p 1 0 0
chr1:154273536|154273886 hsa-miR-4474-3p 0 1 0
chr1:154273536|154273886 hsa-miR-1915-5p 0 1 0
chr1:154273536|154273886 hsa-miR-6748-5p 0 1 0
chr1:154273536|154273886 hsa-miR-6793-5p 1 1 0
chr1:154273536|154273886 hsa-miR-4697-3p 1 0 0
chr1:154273536|154273886 hsa-miR-6805-5p 1 1 0
chr1:154273536|154273886 hsa-miR-6798-5p 1 0 0
chr1:154273536|154273886 hsa-miR-3126-5p 1 1 0
chr1:154273536|154273886 hsa-miR-3691-3p 0 1 0
chr1:154273536|154273886 hsa-miR-4763-5p 1 0 0
chr1:154273536|154273886 hsa-miR-1229-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6894-3p 1 0 0
chr1:154273536|154273886 hsa-miR-4715-3p 0 1 0
chr1:154273536|154273886 hsa-miR-5001-3p 1 0 0
chr1:154273536|154273886 hsa-miR-6771-5p 1 0 0
chr1:154273536|154273886 hsa-miR-92b-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6749-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6834-5p 0 1 0
chr1:154273536|154273886 hsa-miR-659-5p 0 1 0
chr1:154273536|154273886 hsa-miR-3690 0 1 0
chr1:154273536|154273886 hsa-miR-149-3p 1 1 0
chr1:154273536|154273886 hsa-miR-937-5p 0 1 0
chr1:154273536|154273886 hsa-miR-3162-5p 1 1 0
chr1:154273536|154273886 hsa-miR-6802-5p 1 0 0
chr1:154273536|154273886 hsa-miR-5010-5p 0 1 0
chr1:154273536|154273886 hsa-miR-423-5p 1 1 0
chr1:154273536|154273886 hsa-miR-660-3p 0 1 0
chr1:154273536|154273886 hsa-miR-873-3p 1 1 0
chr1:154273536|154273886 hsa-miR-6773-3p 0 1 0
chr1:154273536|154273886 hsa-miR-6734-3p 0 1 0
chr1:154273536|154273886 hsa-miR-3200-3p 0 1 0
chr1:154273536|154273886 hsa-miR-1207-5p 1 1 0
chr1:154273536|154273886 hsa-miR-3689b-3p 0 1 0
chr1:154273536|154273886 hsa-miR-6769b-5p 1 1 0
chr1:154273536|154273886 hsa-miR-6743-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6752-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6754-5p 0 1 0
chr1:154273536|154273886 hsa-miR-6769a-5p 1 1 0
chr1:154273536|154273886 hsa-miR-6803-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6813-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6819-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6780a-5p 1 1 0
chr1:154273536|154273886 hsa-miR-6797-5p 0 1 0
chr1:154273536|154273886 hsa-miR-3620-5p 1 0 0
chr1:154273536|154273886 hsa-miR-4728-5p 0 1 0
chr1:154273536|154273886 hsa-miR-1237-5p 1 0 0
chr1:154273536|154273886 hsa-miR-328-5p 1 0 0
chr1:154273536|154273886 hsa-miR-3689a-3p 0 1 0
chr1:154273536|154273886 hsa-miR-4632-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6795-5p 1 1 0
chr1:154273536|154273886 hsa-miR-6848-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6887-5p 1 0 0
chr1:154273536|154273886 hsa-miR-6889-5p 1 0 0
chr1:154273536|154273886 hsa-miR-4723-5p 1 0 0
chr1:154273536|154273886 hsa-miR-4769-5p 1 0 0
chr1:154273536|154273886 hsa-miR-3940-5p 1 1 0
chr1:154273536|154273886 hsa-miR-4665-5p 0 1 0
chr1:154273536|154273886 hsa-miR-2682-3p 1 0 0
chr1:154273536|154273886 hsa-miR-6762-5p 1 0 0
chr1:154273536|154273886 hsa-miR-4722-3p 0 1 0
chr1:154273536|154273886 hsa-miR-6727-3p 0 1 0
chr1:154273536|154273886 hsa-miR-892c-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:154273536|154273886
ORF Type ORF1
Protein Length 43
Nucleotide Length 132
Protein Sequence MGKDLGSINLSEIISLLTLPIPQLLPAGSLFHPPTHQKPQVAP
Nucleotide Sequence ATGGGAAAGGACTTGGGCTCTATTAATCTCTCTGAAATCATCAGTCTTCTCACACTTCCCATCCCCCAGCTACTCCCTGCAGGCTCTTTATTTCACCCACCAACCCACCAGAAACCACAGGTTGCCCCTTAG

CircID chr1:154273536|154273886
ORF Type ORF2
Protein Length 102
Nucleotide Length 306
Protein Sequence MSPEVSVPPVVSHQVSLTQDLEVLQKGGRCLLGWERTWALLISLKSSVFSHFPSPSYSLQALYFTHQPTRNHRLPLRESHTPGGWEGKVQAPISLKMLLKSR
Nucleotide Sequence TTGAGTCCCGAAGTGTCTGTCCCTCCCGTAGTCTCTCACCAGGTGTCTCTGACTCAGGACCTGGAAGTTCTGCAGAAAGGTGGCAGGTGTTTGCTGGGATGGGAAAGGACTTGGGCTCTATTAATCTCTCTGAAATCATCAGTCTTCTCACACTTCCCATCCCCCAGCTACTCCCTGCAGGCTCTTTATTTCACCCACCAACCCACCAGAAACCACAGGTTGCCCCTTAGGGAAAGCCACACACCAGGAGGATGGGAAGGCAAGGTCCAGGCCCCCATATCGCTGAAGATGCTATTGAAATCTCGT

CircID chr1:154273536|154273886
ORF Type ORF3
Protein Length 68
Nucleotide Length 204
Protein Sequence MGSVRRLMISERLIEPKSFPIPANTCHLSAELPGPESETPGERLREGQTLRDSMLKYPDSHQPRIFGG
Nucleotide Sequence ATGGGAAGTGTGAGAAGACTGATGATTTCAGAGAGATTAATAGAGCCCAAGTCCTTTCCCATCCCAGCAAACACCTGCCACCTTTCTGCAGAACTTCCAGGTCCTGAGTCAGAGACACCTGGTGAGAGACTACGGGAGGGACAGACACTTCGGGACTCAATGCTTAAGTATCCAGATAGTCACCAGCCCAGGATCTTTGGGGGG

CircID chr1:154273536|154273886
ORF Type ORF4
Protein Length 40
Nucleotide Length 123
Protein Sequence MDLAFPSSWCVAFPKGQPVVSGGLVGEIKSLQGVAGGWEV
Nucleotide Sequence CTGGACCTTGCCTTCCCATCCTCCTGGTGTGTGGCTTTCCCTAAGGGGCAACCTGTGGTTTCTGGTGGGTTGGTGGGTGAAATAAAGAGCCTGCAGGGAGTAGCTGGGGGATGGGAAGTGTGA

CircID chr1:154273536|154273886
ORF Type ORF5
Protein Length 39
Nucleotide Length 117
Protein Sequence MQNFQVLSQRHLVRDYGRDRHFGTQCLSIQIVTSPGSLG
Nucleotide Sequence CTGCAGAACTTCCAGGTCCTGAGTCAGAGACACCTGGTGAGAGACTACGGGAGGGACAGACACTTCGGGACTCAATGCTTAAGTATCCAGATAGTCACCAGCCCAGGATCTTTGGGG

CircID chr1:154273536|154273886
ORF Type ORF6
Protein Length 30
Nucleotide Length 93
Protein Sequence MGAWTLPSHPPGVWLSLRGNLWFLVGWWVK
Nucleotide Sequence ATGGGGGCCTGGACCTTGCCTTCCCATCCTCCTGGTGTGTGGCTTTCCCTAAGGGGCAACCTGTGGTTTCTGGTGGGTTGGTGGGTGAAATAA

CircID chr1:154273536|154273886
ORF Type ORF7
Protein Length 37
Nucleotide Length 114
Protein Sequence MGDGKCEKTDDFREINRAQVLSHPSKHLPPFCRTSRS
Nucleotide Sequence CTGGGGGATGGGAAGTGTGAGAAGACTGATGATTTCAGAGAGATTAATAGAGCCCAAGTCCTTTCCCATCCCAGCAAACACCTGCCACCTTTCTGCAGAACTTCCAGGTCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites