CircRNA Information

General Information
circRNA Basic Information
CircID chr1:154275682|154275784
Strand -
CircType exon
Host Gene ENSG00000143575.13;
Algorism CIRI2;
Sequence GTTGGTTCCGGTCCCGGTAGCCTTGTTAACCCTCAGAGGCCTTCAAGTCCTTTCCACCTCTCACCCATTGCCCACCATTAATAAGCTTAGCTTCTCTTGCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:154275682|154275784 hsa-miR-21-5p 0 0 1
chr1:154275682|154275784 hsa-miR-21-3p 0 0 1
chr1:154275682|154275784 hsa-miR-31-5p 0 0 1
chr1:154275682|154275784 hsa-miR-31-3p 0 0 1
chr1:154275682|154275784 hsa-miR-541-5p 0 0 1
chr1:154275682|154275784 hsa-miR-541-3p 0 0 1
chr1:154275682|154275784 hsa-miR-1262 1 1 1
chr1:154275682|154275784 hsa-miR-654-5p 0 0 1
chr1:154275682|154275784 hsa-miR-590-5p 0 0 1
chr1:154275682|154275784 hsa-miR-608 1 0 0
chr1:154275682|154275784 hsa-miR-1275 1 0 0
chr1:154275682|154275784 hsa-miR-3131 1 0 0
chr1:154275682|154275784 hsa-miR-3138 1 0 0
chr1:154275682|154275784 hsa-miR-3147 1 0 0
chr1:154275682|154275784 hsa-miR-4257 1 0 0
chr1:154275682|154275784 hsa-miR-4440 1 0 0
chr1:154275682|154275784 hsa-miR-3689c 1 0 0
chr1:154275682|154275784 hsa-miR-4506 1 0 0
chr1:154275682|154275784 hsa-miR-4533 1 0 0
chr1:154275682|154275784 hsa-miR-4651 1 0 0
chr1:154275682|154275784 hsa-miR-4663 1 0 0
chr1:154275682|154275784 hsa-miR-4710 1 0 0
chr1:154275682|154275784 hsa-miR-5194 1 0 0
chr1:154275682|154275784 hsa-miR-6126 0 1 0
chr1:154275682|154275784 hsa-miR-6133 1 0 0
chr1:154275682|154275784 hsa-miR-6134 0 1 0
chr1:154275682|154275784 hsa-miR-6165 1 0 0
chr1:154275682|154275784 hsa-miR-6745 1 0 0
chr1:154275682|154275784 hsa-miR-7150 1 0 0
chr1:154275682|154275784 hsa-miR-8083 1 1 0
chr1:154275682|154275784 hsa-miR-8085 1 0 0
chr1:154275682|154275784 hsa-miR-6809-5p 1 0 0
chr1:154275682|154275784 hsa-miR-7106-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6799-5p 1 1 0
chr1:154275682|154275784 hsa-miR-6880-5p 1 0 0
chr1:154275682|154275784 hsa-miR-4722-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6730-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6741-5p 1 0 0
chr1:154275682|154275784 hsa-miR-3622b-5p 1 0 0
chr1:154275682|154275784 hsa-miR-8069 1 0 0
chr1:154275682|154275784 hsa-miR-27b-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6716-5p 1 0 0
chr1:154275682|154275784 hsa-miR-3180-3p 1 0 0
chr1:154275682|154275784 hsa-miR-6748-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6796-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6732-5p 1 0 0
chr1:154275682|154275784 hsa-miR-3190-3p 1 0 0
chr1:154275682|154275784 hsa-miR-6782-5p 1 1 0
chr1:154275682|154275784 hsa-miR-30b-3p 1 0 0
chr1:154275682|154275784 hsa-miR-1226-5p 1 0 0
chr1:154275682|154275784 hsa-miR-1229-5p 1 0 0
chr1:154275682|154275784 hsa-miR-885-3p 1 0 0
chr1:154275682|154275784 hsa-miR-3614-5p 1 0 0
chr1:154275682|154275784 hsa-miR-3677-3p 1 0 0
chr1:154275682|154275784 hsa-miR-3202 1 0 0
chr1:154275682|154275784 hsa-miR-6717-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6802-5p 1 0 0
chr1:154275682|154275784 hsa-miR-1207-5p 1 0 0
chr1:154275682|154275784 hsa-miR-1233-5p 1 0 0
chr1:154275682|154275784 hsa-miR-1273h-5p 1 0 0
chr1:154275682|154275784 hsa-miR-3689b-3p 1 0 0
chr1:154275682|154275784 hsa-miR-4763-3p 1 0 0
chr1:154275682|154275784 hsa-miR-6769b-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6778-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6870-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6737-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6756-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6769a-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6819-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6851-5p 1 0 0
chr1:154275682|154275784 hsa-miR-10401-5p 1 0 0
chr1:154275682|154275784 hsa-miR-1249-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6763-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6779-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6797-5p 1 0 0
chr1:154275682|154275784 hsa-miR-7111-5p 1 0 0
chr1:154275682|154275784 hsa-miR-5196-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6780b-5p 1 0 0
chr1:154275682|154275784 hsa-miR-328-5p 1 0 0
chr1:154275682|154275784 hsa-miR-4632-5p 1 0 0
chr1:154275682|154275784 hsa-miR-4649-5p 1 0 0
chr1:154275682|154275784 hsa-miR-4701-3p 1 1 0
chr1:154275682|154275784 hsa-miR-6729-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6738-5p 1 0 0
chr1:154275682|154275784 hsa-miR-4758-5p 1 0 0
chr1:154275682|154275784 hsa-miR-4769-5p 1 0 0
chr1:154275682|154275784 hsa-miR-3940-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6758-5p 0 1 0
chr1:154275682|154275784 hsa-miR-6856-5p 1 0 0
chr1:154275682|154275784 hsa-miR-1285-3p 1 0 0
chr1:154275682|154275784 hsa-miR-6736-5p 1 1 0
chr1:154275682|154275784 hsa-miR-4646-5p 1 0 0
chr1:154275682|154275784 hsa-miR-6766-5p 1 0 0
chr1:154275682|154275784 hsa-miR-4757-5p 0 1 0
chr1:154275682|154275784 hsa-miR-4653-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:154275682|154275784
ORF Type ORF1
Protein Length 34
Nucleotide Length 102
Protein Sequence LVPVPVALLTLRGLQVLSTSHPLPTINKLSFSCH
Nucleotide Sequence TTGGTTCCGGTCCCGGTAGCCTTGTTAACCCTCAGAGGCCTTCAAGTCCTTTCCACCTCTCACCCATTGCCCACCATTAATAAGCTTAGCTTCTCTTGCCAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab