CircRNA Information

General Information
circRNA Basic Information
CircID chr1:154959471|154959599
Strand +
CircType exon
Host Gene ENSG00000163348.3;
Algorism CIRI2;
Sequence CCCCCTTCCCTCCCAATCCTATGGGCCCTGCTTTCAACATGCCCCCCCAGGGTCCTGGCTACCCACCCCCAGGCAACATGAACTTTCCCAGCCAACCCTTCAACCAGCCTCTGGGTCAAAACTTTAGTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:154959471|154959599 hsa-miR-488-5p 0 0 1
chr1:154959471|154959599 hsa-miR-488-3p 0 0 1
chr1:154959471|154959599 hsa-miR-504-5p 0 0 1
chr1:154959471|154959599 hsa-miR-504-3p 0 0 1
chr1:154959471|154959599 hsa-miR-561-5p 0 0 1
chr1:154959471|154959599 hsa-miR-561-3p 0 0 1
chr1:154959471|154959599 hsa-miR-563 0 0 1
chr1:154959471|154959599 hsa-miR-575 0 0 1
chr1:154959471|154959599 hsa-miR-608 1 1 1
chr1:154959471|154959599 hsa-miR-637 0 1 1
chr1:154959471|154959599 hsa-miR-647 0 0 1
chr1:154959471|154959599 hsa-miR-661 0 0 1
chr1:154959471|154959599 hsa-miR-653-5p 0 0 1
chr1:154959471|154959599 hsa-miR-653-3p 0 0 1
chr1:154959471|154959599 hsa-miR-1206 0 0 1
chr1:154959471|154959599 hsa-miR-296-3p 1 1 1
chr1:154959471|154959599 hsa-miR-485-5p 0 0 1
chr1:154959471|154959599 hsa-miR-1254 0 0 1
chr1:154959471|154959599 hsa-miR-663a 1 0 0
chr1:154959471|154959599 hsa-miR-762 1 0 0
chr1:154959471|154959599 hsa-miR-940 1 0 0
chr1:154959471|154959599 hsa-miR-1268a 1 0 0
chr1:154959471|154959599 hsa-miR-3196 1 0 0
chr1:154959471|154959599 hsa-miR-4253 1 1 0
chr1:154959471|154959599 hsa-miR-4292 0 1 0
chr1:154959471|154959599 hsa-miR-1268b 1 0 0
chr1:154959471|154959599 hsa-miR-4425 1 0 0
chr1:154959471|154959599 hsa-miR-4462 1 0 0
chr1:154959471|154959599 hsa-miR-4498 1 0 0
chr1:154959471|154959599 hsa-miR-4505 1 0 0
chr1:154959471|154959599 hsa-miR-4507 1 0 0
chr1:154959471|154959599 hsa-miR-1587 1 0 0
chr1:154959471|154959599 hsa-miR-4651 1 1 0
chr1:154959471|154959599 hsa-miR-5194 1 0 0
chr1:154959471|154959599 hsa-miR-5787 1 0 0
chr1:154959471|154959599 hsa-miR-6075 1 0 0
chr1:154959471|154959599 hsa-miR-6086 1 0 0
chr1:154959471|154959599 hsa-miR-6132 1 1 0
chr1:154959471|154959599 hsa-miR-6165 1 0 0
chr1:154959471|154959599 hsa-miR-8085 1 0 0
chr1:154959471|154959599 hsa-miR-8089 1 0 0
chr1:154959471|154959599 hsa-miR-92a-1-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6840-3p 1 1 0
chr1:154959471|154959599 hsa-miR-6728-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6089 1 0 0
chr1:154959471|154959599 hsa-miR-6757-5p 1 0 0
chr1:154959471|154959599 hsa-miR-197-5p 1 0 0
chr1:154959471|154959599 hsa-miR-8069 1 0 0
chr1:154959471|154959599 hsa-miR-6748-5p 0 1 0
chr1:154959471|154959599 hsa-miR-6796-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6732-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6881-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6782-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6852-5p 0 1 0
chr1:154959471|154959599 hsa-miR-6835-5p 1 0 0
chr1:154959471|154959599 hsa-miR-5088-5p 1 1 0
chr1:154959471|154959599 hsa-miR-1229-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6753-5p 1 0 0
chr1:154959471|154959599 hsa-miR-3127-5p 0 1 0
chr1:154959471|154959599 hsa-miR-6823-5p 1 0 0
chr1:154959471|154959599 hsa-miR-4446-3p 1 0 0
chr1:154959471|154959599 hsa-miR-149-3p 0 1 0
chr1:154959471|154959599 hsa-miR-937-5p 1 0 0
chr1:154959471|154959599 hsa-miR-4715-5p 1 0 0
chr1:154959471|154959599 hsa-miR-7160-3p 0 1 0
chr1:154959471|154959599 hsa-miR-7846-3p 1 0 0
chr1:154959471|154959599 hsa-miR-1225-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6792-5p 1 0 0
chr1:154959471|154959599 hsa-miR-1306-3p 1 0 0
chr1:154959471|154959599 hsa-miR-1207-5p 1 0 0
chr1:154959471|154959599 hsa-miR-1233-5p 1 0 0
chr1:154959471|154959599 hsa-miR-4763-3p 1 0 0
chr1:154959471|154959599 hsa-miR-6769b-5p 0 1 0
chr1:154959471|154959599 hsa-miR-6816-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6893-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6775-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6737-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6743-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6752-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6756-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6769a-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6803-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6813-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6819-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6842-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6722-3p 1 0 0
chr1:154959471|154959599 hsa-miR-6751-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6779-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6780a-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6797-5p 0 1 0
chr1:154959471|154959599 hsa-miR-3620-5p 1 0 0
chr1:154959471|154959599 hsa-miR-4728-5p 0 1 0
chr1:154959471|154959599 hsa-miR-5196-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6780b-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6836-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6862-5p 0 1 0
chr1:154959471|154959599 hsa-miR-10396a-5p 1 0 0
chr1:154959471|154959599 hsa-miR-10396b-5p 1 0 0
chr1:154959471|154959599 hsa-miR-1237-5p 1 0 0
chr1:154959471|154959599 hsa-miR-328-5p 1 1 0
chr1:154959471|154959599 hsa-miR-4685-5p 1 1 0
chr1:154959471|154959599 hsa-miR-4725-3p 1 0 0
chr1:154959471|154959599 hsa-miR-4726-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6738-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6795-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6848-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6883-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6887-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6885-5p 1 1 0
chr1:154959471|154959599 hsa-miR-939-5p 0 1 0
chr1:154959471|154959599 hsa-miR-3940-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6773-5p 1 0 0
chr1:154959471|154959599 hsa-miR-1914-3p 1 0 0
chr1:154959471|154959599 hsa-miR-10398-3p 1 0 0
chr1:154959471|154959599 hsa-miR-4646-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6766-5p 0 1 0
chr1:154959471|154959599 hsa-miR-6785-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6791-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6762-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6837-5p 1 0 0
chr1:154959471|154959599 hsa-miR-6884-5p 1 1 0
chr1:154959471|154959599 hsa-miR-6764-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:154959471|154959599
ORF Type ORF1
Protein Length 36
Nucleotide Length 108
Protein Sequence MGPAFNMPPQGPGYPPPGNMNFPSQPFNQPLGQNFS
Nucleotide Sequence ATGGGCCCTGCTTTCAACATGCCCCCCCAGGGTCCTGGCTACCCACCCCCAGGCAACATGAACTTTCCCAGCCAACCCTTCAACCAGCCTCTGGGTCAAAACTTTAGT

CircID chr1:154959471|154959599
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MTQRLVEGLAGKVHVAWGWVARTLGGHVESRAHRIGREG
Nucleotide Sequence TTGACCCAGAGGCTGGTTGAAGGGTTGGCTGGGAAAGTTCATGTTGCCTGGGGGTGGGTAGCCAGGACCCTGGGGGGGCATGTTGAAAGCAGGGCCCATAGGATTGGGAGGGAAGGG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites