CircRNA Information

General Information
circRNA Basic Information
CircID chr1:154966009|154966389
Strand -
CircType exon
Host Gene ENSG00000160691.17;
Algorism CIRI2;
Sequence CCACTGCTTGCCGGGCCTTGTCTAGGTTCTGGACGTTGACATAGGAGGGATCATCAAAAAGCTCTCTGCCTGCTGAGGAAAGGGAGGCTCTACAGTGATCCCAGCCCTGCCTCCAACACTCCCCAGCTCTGCCTATCTCGGCTCCCTTCATACCTGGACAGGGTGGTGGAGGTGGCATCTGTTTGCGGACTTCTGGATCTCCCCCAACAGGCTGTCCTACAGGCTGCAGGGATAAAAATAAGGTGAGACCAGAAGCCCTAACCAACCACTCCCACCCTAGCCCCAGCCCGCCTCCATCCAAGCAACTTACCAATGTAGCTCCCAAGTGGCTGGGGGTCTGGGCATTGGGTGCAGTGGGTCGAGCAGCCCCTGGAGCGGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:154966009|154966389 hsa-miR-198 1 1 1
chr1:154966009|154966389 hsa-miR-10a-5p 0 0 1
chr1:154966009|154966389 hsa-miR-10a-3p 0 0 1
chr1:154966009|154966389 hsa-miR-10b-5p 0 0 1
chr1:154966009|154966389 hsa-miR-10b-3p 0 0 1
chr1:154966009|154966389 hsa-miR-204-5p 0 0 1
chr1:154966009|154966389 hsa-miR-204-3p 0 0 1
chr1:154966009|154966389 hsa-miR-211-5p 0 0 1
chr1:154966009|154966389 hsa-miR-211-3p 0 0 1
chr1:154966009|154966389 hsa-miR-214-5p 0 0 1
chr1:154966009|154966389 hsa-miR-214-3p 0 0 1
chr1:154966009|154966389 hsa-miR-221-5p 0 0 1
chr1:154966009|154966389 hsa-miR-221-3p 0 0 1
chr1:154966009|154966389 hsa-miR-222-5p 0 0 1
chr1:154966009|154966389 hsa-miR-222-3p 0 0 1
chr1:154966009|154966389 hsa-miR-122-5p 0 0 1
chr1:154966009|154966389 hsa-miR-122-3p 0 0 1
chr1:154966009|154966389 hsa-miR-382-5p 0 0 1
chr1:154966009|154966389 hsa-miR-382-3p 0 0 1
chr1:154966009|154966389 hsa-miR-505-5p 0 0 1
chr1:154966009|154966389 hsa-miR-505-3p 0 0 1
chr1:154966009|154966389 hsa-miR-551a 0 1 1
chr1:154966009|154966389 hsa-miR-551b-5p 0 0 1
chr1:154966009|154966389 hsa-miR-551b-3p 0 0 1
chr1:154966009|154966389 hsa-miR-625-5p 0 0 1
chr1:154966009|154966389 hsa-miR-625-3p 0 0 1
chr1:154966009|154966389 hsa-miR-638 0 0 1
chr1:154966009|154966389 hsa-miR-650 0 1 1
chr1:154966009|154966389 hsa-miR-1296-5p 0 0 1
chr1:154966009|154966389 hsa-miR-1296-3p 0 0 1
chr1:154966009|154966389 hsa-miR-920 1 1 1
chr1:154966009|154966389 hsa-miR-922 0 0 1
chr1:154966009|154966389 hsa-miR-939-5p 0 0 1
chr1:154966009|154966389 hsa-miR-939-3p 0 0 1
chr1:154966009|154966389 hsa-miR-940 0 1 1
chr1:154966009|154966389 hsa-miR-1183 0 0 1
chr1:154966009|154966389 hsa-miR-1229-5p 0 0 1
chr1:154966009|154966389 hsa-miR-1229-3p 0 0 1
chr1:154966009|154966389 hsa-miR-1238-5p 0 0 1
chr1:154966009|154966389 hsa-miR-1238-3p 0 0 1
chr1:154966009|154966389 hsa-miR-1208 0 0 1
chr1:154966009|154966389 hsa-miR-1275 0 1 1
chr1:154966009|154966389 hsa-miR-1197 0 0 1
chr1:154966009|154966389 hsa-miR-1827 0 0 1
chr1:154966009|154966389 hsa-miR-140-5p 0 0 1
chr1:154966009|154966389 hsa-miR-339-5p 0 0 1
chr1:154966009|154966389 hsa-miR-1184 0 1 1
chr1:154966009|154966389 hsa-miR-361-3p 0 0 1
chr1:154966009|154966389 hsa-miR-188-5p 0 0 1
chr1:154966009|154966389 hsa-miR-1207-5p 1 1 1
chr1:154966009|154966389 hsa-miR-769-3p 0 1 1
chr1:154966009|154966389 hsa-miR-450b-3p 0 1 1
chr1:154966009|154966389 hsa-miR-220b 0 0 1
chr1:154966009|154966389 hsa-miR-768-5p 0 0 1
chr1:154966009|154966389 hsa-miR-365 0 0 1
chr1:154966009|154966389 hsa-miR-637 1 0 0
chr1:154966009|154966389 hsa-miR-762 1 1 0
chr1:154966009|154966389 hsa-miR-2861 1 0 0
chr1:154966009|154966389 hsa-miR-3137 1 0 0
chr1:154966009|154966389 hsa-miR-3147 1 0 0
chr1:154966009|154966389 hsa-miR-4291 0 1 0
chr1:154966009|154966389 hsa-miR-4421 0 1 0
chr1:154966009|154966389 hsa-miR-4443 0 1 0
chr1:154966009|154966389 hsa-miR-4451 0 1 0
chr1:154966009|154966389 hsa-miR-4478 1 0 0
chr1:154966009|154966389 hsa-miR-4488 1 0 0
chr1:154966009|154966389 hsa-miR-4489 0 1 0
chr1:154966009|154966389 hsa-miR-4492 0 1 0
chr1:154966009|154966389 hsa-miR-4498 1 1 0
chr1:154966009|154966389 hsa-miR-4505 1 1 0
chr1:154966009|154966389 hsa-miR-4514 0 1 0
chr1:154966009|154966389 hsa-miR-4534 0 1 0
chr1:154966009|154966389 hsa-miR-1587 1 1 0
chr1:154966009|154966389 hsa-miR-4537 1 1 0
chr1:154966009|154966389 hsa-miR-4538 1 1 0
chr1:154966009|154966389 hsa-miR-4651 1 1 0
chr1:154966009|154966389 hsa-miR-4656 1 0 0
chr1:154966009|154966389 hsa-miR-4683 0 1 0
chr1:154966009|154966389 hsa-miR-4706 1 0 0
chr1:154966009|154966389 hsa-miR-4739 1 0 0
chr1:154966009|154966389 hsa-miR-5683 0 1 0
chr1:154966009|154966389 hsa-miR-5787 1 1 0
chr1:154966009|154966389 hsa-miR-6090 1 0 0
chr1:154966009|154966389 hsa-miR-6132 1 1 0
chr1:154966009|154966389 hsa-miR-6860 1 0 0
chr1:154966009|154966389 hsa-miR-8082 0 1 0
chr1:154966009|154966389 hsa-miR-8089 1 1 0
chr1:154966009|154966389 hsa-miR-12115 1 0 0
chr1:154966009|154966389 hsa-miR-12119 1 0 0
chr1:154966009|154966389 hsa-miR-197-3p 0 1 0
chr1:154966009|154966389 hsa-miR-6734-5p 1 1 0
chr1:154966009|154966389 hsa-miR-4731-5p 0 1 0
chr1:154966009|154966389 hsa-miR-6765-5p 1 0 0
chr1:154966009|154966389 hsa-miR-125b-1-3p 1 0 0
chr1:154966009|154966389 hsa-miR-3150a-3p 0 1 0
chr1:154966009|154966389 hsa-miR-6825-5p 0 1 0
chr1:154966009|154966389 hsa-miR-125a-3p 1 0 0
chr1:154966009|154966389 hsa-miR-6799-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6089 1 0 0
chr1:154966009|154966389 hsa-miR-4653-3p 1 1 0
chr1:154966009|154966389 hsa-miR-6820-5p 0 1 0
chr1:154966009|154966389 hsa-miR-6762-3p 0 1 0
chr1:154966009|154966389 hsa-miR-6727-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6806-5p 1 0 0
chr1:154966009|154966389 hsa-miR-197-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6796-5p 1 0 0
chr1:154966009|154966389 hsa-miR-185-3p 1 1 0
chr1:154966009|154966389 hsa-miR-6805-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6827-5p 0 1 0
chr1:154966009|154966389 hsa-miR-4753-3p 0 1 0
chr1:154966009|154966389 hsa-miR-3130-3p 0 1 0
chr1:154966009|154966389 hsa-miR-6881-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6782-5p 1 0 0
chr1:154966009|154966389 hsa-miR-1226-5p 1 0 0
chr1:154966009|154966389 hsa-miR-4715-3p 0 1 0
chr1:154966009|154966389 hsa-miR-296-3p 1 0 0
chr1:154966009|154966389 hsa-miR-4690-5p 0 1 0
chr1:154966009|154966389 hsa-miR-4732-5p 1 0 0
chr1:154966009|154966389 hsa-miR-3202 1 0 0
chr1:154966009|154966389 hsa-miR-4446-3p 0 1 0
chr1:154966009|154966389 hsa-miR-149-3p 1 0 0
chr1:154966009|154966389 hsa-miR-6824-5p 1 0 0
chr1:154966009|154966389 hsa-miR-3162-5p 1 0 0
chr1:154966009|154966389 hsa-miR-7156-3p 0 1 0
chr1:154966009|154966389 hsa-miR-6877-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6864-5p 1 1 0
chr1:154966009|154966389 hsa-miR-887-5p 0 1 0
chr1:154966009|154966389 hsa-miR-3158-3p 0 1 0
chr1:154966009|154966389 hsa-miR-6859-3p 0 1 0
chr1:154966009|154966389 hsa-miR-4763-3p 1 1 0
chr1:154966009|154966389 hsa-miR-6812-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6870-5p 0 1 0
chr1:154966009|154966389 hsa-miR-6893-5p 0 1 0
chr1:154966009|154966389 hsa-miR-5001-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6726-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6752-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6756-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6803-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6813-5p 0 1 0
chr1:154966009|154966389 hsa-miR-6819-5p 1 0 0
chr1:154966009|154966389 hsa-miR-1249-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6751-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6763-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6779-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6797-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6808-5p 0 1 0
chr1:154966009|154966389 hsa-miR-4685-3p 0 1 0
chr1:154966009|154966389 hsa-miR-3620-5p 1 1 0
chr1:154966009|154966389 hsa-miR-5196-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6836-5p 1 0 0
chr1:154966009|154966389 hsa-miR-10526-3p 1 0 0
chr1:154966009|154966389 hsa-miR-4649-5p 1 0 0
chr1:154966009|154966389 hsa-miR-4685-5p 1 0 0
chr1:154966009|154966389 hsa-miR-4745-3p 0 1 0
chr1:154966009|154966389 hsa-miR-6729-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6777-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6846-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6848-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6889-5p 1 1 0
chr1:154966009|154966389 hsa-miR-4723-5p 0 1 0
chr1:154966009|154966389 hsa-miR-6831-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6511a-5p 1 1 0
chr1:154966009|154966389 hsa-miR-324-3p 0 1 0
chr1:154966009|154966389 hsa-miR-6766-5p 0 1 0
chr1:154966009|154966389 hsa-miR-4667-5p 0 1 0
chr1:154966009|154966389 hsa-miR-5591-5p 1 1 0
chr1:154966009|154966389 hsa-miR-6791-5p 1 0 0
chr1:154966009|154966389 hsa-miR-6823-3p 0 1 0
chr1:154966009|154966389 hsa-miR-619-5p 0 1 0
chr1:154966009|154966389 hsa-miR-3619-5p 0 1 0
chr1:154966009|154966389 hsa-miR-6506-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:154966009|154966389
ORF Type ORF1
Protein Length 58
Nucleotide Length 177
Protein Sequence MLRKGRLYSDPSPASNTPQLCLSRLPSYLDRVVEVASVCGLLDLPQQAVLQAAGIKIR
Nucleotide Sequence CTGCTGAGGAAAGGGAGGCTCTACAGTGATCCCAGCCCTGCCTCCAACACTCCCCAGCTCTGCCTATCTCGGCTCCCTTCATACCTGGACAGGGTGGTGGAGGTGGCATCTGTTTGCGGACTTCTGGATCTCCCCCAACAGGCTGTCCTACAGGCTGCAGGGATAAAAATAAGGTGA
CircID chr1:154966009|154966389
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MPPTLPSSAYLGSLHTWTGWWRWHLFADFWISPNRLSYRLQG
Nucleotide Sequence CTGCCTCCAACACTCCCCAGCTCTGCCTATCTCGGCTCCCTTCATACCTGGACAGGGTGGTGGAGGTGGCATCTGTTTGCGGACTTCTGGATCTCCCCCAACAGGCTGTCCTACAGGCTGCAGGGATAA
CircID chr1:154966009|154966389
ORF Type ORF3
Protein Length 84
Nucleotide Length 252
Protein Sequence MPISAPFIPGQGGGGGICLRTSGSPPTGCPTGCRDKNKVRPEALTNHSHPSPSPPPSKQLTNVAPKWLGVWALGAVGRAAPGAA
Nucleotide Sequence CTGCCTATCTCGGCTCCCTTCATACCTGGACAGGGTGGTGGAGGTGGCATCTGTTTGCGGACTTCTGGATCTCCCCCAACAGGCTGTCCTACAGGCTGCAGGGATAAAAATAAGGTGAGACCAGAAGCCCTAACCAACCACTCCCACCCTAGCCCCAGCCCGCCTCCATCCAAGCAACTTACCAATGTAGCTCCCAAGTGGCTGGGGGTCTGGGCATTGGGTGCAGTGGGTCGAGCAGCCCCTGGAGCGGCT
CircID chr1:154966009|154966389
ORF Type ORF4
Protein Length 34
Nucleotide Length 105
Protein Sequence MGSVGGRAGITVEPPFPQQAESFLMIPPMSTSRT
Nucleotide Sequence CTGGGGAGTGTTGGAGGCAGGGCTGGGATCACTGTAGAGCCTCCCTTTCCTCAGCAGGCAGAGAGCTTTTTGATGATCCCTCCTATGTCAACGTCCAGAACCTAG
CircID chr1:154966009|154966389
ORF Type ORF5
Protein Length 108
Nucleotide Length 324
Protein Sequence MGATLVSCLDGGGLGLGWEWLVRASGLTLFLSLQPVGQPVGGDPEVRKQMPPPPPCPGMKGAEIGRAGECWRQGWDHCRASLSSAGRELFDDPSYVNVQNLDKARQAV
Nucleotide Sequence TTGGGAGCTACATTGGTAAGTTGCTTGGATGGAGGCGGGCTGGGGCTAGGGTGGGAGTGGTTGGTTAGGGCTTCTGGTCTCACCTTATTTTTATCCCTGCAGCCTGTAGGACAGCCTGTTGGGGGAGATCCAGAAGTCCGCAAACAGATGCCACCTCCACCACCCTGTCCAGGTATGAAGGGAGCCGAGATAGGCAGAGCTGGGGAGTGTTGGAGGCAGGGCTGGGATCACTGTAGAGCCTCCCTTTCCTCAGCAGGCAGAGAGCTTTTTGATGATCCCTCCTATGTCAACGTCCAGAACCTAGACAAGGCCCGGCAAGCAGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab