CircRNA Information

General Information
circRNA Basic Information
CircID chr1:155134061|155134206
Strand -
CircType exon
Host Gene ENSG00000169242.10;
Algorism CIRI2;
Sequence CCCGTGAAGGTGTATGCCACACCTGGCCTTAAAGAGGGACAGGCTGAAGAGAGGGACAGGCACTCCAAACCTGTCTTGGGGCCACTTTCAGAGCCCCCAGCCCTGGGAACCACTCCCACCACAGGCATAAGCTATCACCTAGCAGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:155134061|155134206 hsa-miR-21-5p 0 0 1
chr1:155134061|155134206 hsa-miR-21-3p 0 0 1
chr1:155134061|155134206 hsa-miR-122-5p 0 0 1
chr1:155134061|155134206 hsa-miR-122-3p 0 0 1
chr1:155134061|155134206 hsa-miR-519e-5p 0 0 1
chr1:155134061|155134206 hsa-miR-519e-3p 0 0 1
chr1:155134061|155134206 hsa-miR-637 1 1 1
chr1:155134061|155134206 hsa-miR-541-5p 0 0 1
chr1:155134061|155134206 hsa-miR-541-3p 0 0 1
chr1:155134061|155134206 hsa-miR-760 0 0 1
chr1:155134061|155134206 hsa-miR-1236-5p 0 0 1
chr1:155134061|155134206 hsa-miR-1236-3p 0 0 1
chr1:155134061|155134206 hsa-miR-663b 0 0 1
chr1:155134061|155134206 hsa-miR-140-5p 0 0 1
chr1:155134061|155134206 hsa-miR-654-5p 0 0 1
chr1:155134061|155134206 hsa-miR-532-5p 0 0 1
chr1:155134061|155134206 hsa-miR-515-3p 0 0 1
chr1:155134061|155134206 hsa-miR-590-5p 0 0 1
chr1:155134061|155134206 hsa-miR-550 0 0 1
chr1:155134061|155134206 hsa-miR-642 0 0 1
chr1:155134061|155134206 hsa-miR-644 0 0 1
chr1:155134061|155134206 hsa-miR-768-5p 0 0 1
chr1:155134061|155134206 hsa-miR-762 1 1 0
chr1:155134061|155134206 hsa-miR-3183 0 1 0
chr1:155134061|155134206 hsa-miR-4449 1 0 0
chr1:155134061|155134206 hsa-miR-4492 0 1 0
chr1:155134061|155134206 hsa-miR-4498 1 0 0
chr1:155134061|155134206 hsa-miR-4656 1 0 0
chr1:155134061|155134206 hsa-miR-4748 0 1 0
chr1:155134061|155134206 hsa-miR-5787 1 1 0
chr1:155134061|155134206 hsa-miR-6085 1 0 0
chr1:155134061|155134206 hsa-miR-4731-5p 1 1 0
chr1:155134061|155134206 hsa-miR-210-3p 1 0 0
chr1:155134061|155134206 hsa-miR-3934-5p 0 1 0
chr1:155134061|155134206 hsa-miR-874-5p 0 1 0
chr1:155134061|155134206 hsa-miR-6741-5p 1 0 0
chr1:155134061|155134206 hsa-miR-5589-5p 1 0 0
chr1:155134061|155134206 hsa-miR-6873-3p 0 1 0
chr1:155134061|155134206 hsa-miR-23a-5p 0 1 0
chr1:155134061|155134206 hsa-miR-4753-3p 0 1 0
chr1:155134061|155134206 hsa-miR-1909-5p 0 1 0
chr1:155134061|155134206 hsa-miR-6514-3p 0 1 0
chr1:155134061|155134206 hsa-miR-4446-3p 0 1 0
chr1:155134061|155134206 hsa-miR-6748-3p 0 1 0
chr1:155134061|155134206 hsa-miR-6515-3p 0 1 0
chr1:155134061|155134206 hsa-miR-642a-5p 0 1 0
chr1:155134061|155134206 hsa-miR-4524b-3p 0 1 0
chr1:155134061|155134206 hsa-miR-1233-5p 0 1 0
chr1:155134061|155134206 hsa-miR-4763-3p 1 0 0
chr1:155134061|155134206 hsa-miR-6756-5p 1 0 0
chr1:155134061|155134206 hsa-miR-6803-5p 1 1 0
chr1:155134061|155134206 hsa-miR-6751-5p 1 0 0
chr1:155134061|155134206 hsa-miR-320a-5p 0 1 0
chr1:155134061|155134206 hsa-miR-4685-5p 1 1 0
chr1:155134061|155134206 hsa-miR-4701-3p 1 0 0
chr1:155134061|155134206 hsa-miR-6848-5p 0 1 0
chr1:155134061|155134206 hsa-miR-6736-5p 1 0 0
chr1:155134061|155134206 hsa-miR-550a-5p 1 0 0
chr1:155134061|155134206 hsa-miR-4723-3p 0 1 0
chr1:155134061|155134206 hsa-miR-6764-5p 0 1 0
chr1:155134061|155134206 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:155134061|155134206
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MPHLALKRDRLKRGTGTPNLSWGHFQSPQPWEPLPPQA
Nucleotide Sequence ATGCCACACCTGGCCTTAAAGAGGGACAGGCTGAAGAGAGGGACAGGCACTCCAAACCTGTCTTGGGGCCACTTTCAGAGCCCCCAGCCCTGGGAACCACTCCCACCACAGGCATAA

CircID chr1:155134061|155134206
ORF Type ORF2
Protein Length 42
Nucleotide Length 126
Protein Sequence MPVVGVVPRAGGSESGPKTGLECLSLSSACPSLRPGVAYTFT
Nucleotide Sequence ATGCCTGTGGTGGGAGTGGTTCCCAGGGCTGGGGGCTCTGAAAGTGGCCCCAAGACAGGTTTGGAGTGCCTGTCCCTCTCTTCAGCCTGTCCCTCTTTAAGGCCAGGTGTGGCATACACCTTCACG

CircID chr1:155134061|155134206
ORF Type ORF3
Protein Length 38
Nucleotide Length 117
Protein Sequence LLGDSLCLWWEWFPGLGALKVAPRQVWSACPSLQPVPL
Nucleotide Sequence CTGCTAGGTGATAGCTTATGCCTGTGGTGGGAGTGGTTCCCAGGGCTGGGGGCTCTGAAAGTGGCCCCAAGACAGGTTTGGAGTGCCTGTCCCTCTCTTCAGCCTGTCCCTCTTTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites