CircRNA Information

General Information
circRNA Basic Information
CircID chr1:155187815|155188205
Strand -
CircType exon
Host Gene ENSG00000185499.15;
Algorism CIRI2;
Sequence CTTCTCGGAAGGCCAGAGTCAATTGTACCACCACAGATCCTGGCCTGGTCACAGGGAAATGGGCACTTCAGCCACGGGTCCCAGCTCTGGCTCAGCACTCTTCCCCCAACCTTAAGTGCACCAGTCCCTCCCTACGGTCATGACCACCACCCACCCTCCAACCACCACACTGGGTCCACACCCAGAACTGTACCTGAACTTAATATTGGAGAGGCCCAGAAAACCCCCTTGTTTATAAATCTGCAAAAACTGGGGTGAGAGGGAAAGGACTCAGGCTTGATGCAAAGGGTGTGGACAGTTCTGATGGCTGCTTCAGGGGAGCATGGGGAAGGAAAGGCCGATACTCACCATTTCAGAAATGTCTCTCTGCAGCTCTTGGTAGTAGTCGGTG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:155187815|155188205 hsa-miR-340-5p 0 0 1
chr1:155187815|155188205 hsa-miR-340-3p 0 0 1
chr1:155187815|155188205 hsa-miR-335-5p 0 0 1
chr1:155187815|155188205 hsa-miR-335-3p 0 0 1
chr1:155187815|155188205 hsa-miR-496 0 0 1
chr1:155187815|155188205 hsa-miR-522-5p 0 0 1
chr1:155187815|155188205 hsa-miR-522-3p 0 0 1
chr1:155187815|155188205 hsa-miR-507 0 0 1
chr1:155187815|155188205 hsa-miR-557 0 0 1
chr1:155187815|155188205 hsa-miR-558 0 0 1
chr1:155187815|155188205 hsa-miR-573 0 1 1
chr1:155187815|155188205 hsa-miR-609 0 0 1
chr1:155187815|155188205 hsa-miR-612 0 0 1
chr1:155187815|155188205 hsa-miR-625-5p 0 0 1
chr1:155187815|155188205 hsa-miR-625-3p 0 0 1
chr1:155187815|155188205 hsa-miR-1229-5p 0 0 1
chr1:155187815|155188205 hsa-miR-1229-3p 0 0 1
chr1:155187815|155188205 hsa-miR-1234-3p 0 0 1
chr1:155187815|155188205 hsa-miR-1293 1 0 1
chr1:155187815|155188205 hsa-miR-1275 1 1 1
chr1:155187815|155188205 hsa-miR-1321 0 0 1
chr1:155187815|155188205 hsa-miR-1234 0 0 1
chr1:155187815|155188205 hsa-miR-129-5p 0 0 1
chr1:155187815|155188205 hsa-miR-512-3p 0 1 1
chr1:155187815|155188205 hsa-miR-199a-5p 0 0 1
chr1:155187815|155188205 hsa-miR-339-5p 0 0 1
chr1:155187815|155188205 hsa-miR-331-3p 0 0 1
chr1:155187815|155188205 hsa-miR-876-3p 0 0 1
chr1:155187815|155188205 hsa-miR-582-5p 0 0 1
chr1:155187815|155188205 hsa-miR-199b-5p 0 0 1
chr1:155187815|155188205 hsa-miR-515-5p 0 0 1
chr1:155187815|155188205 hsa-miR-450b-5p 0 0 1
chr1:155187815|155188205 hsa-miR-1274a 0 0 1
chr1:155187815|155188205 hsa-miR-323-5p 0 0 1
chr1:155187815|155188205 hsa-miR-642 0 0 1
chr1:155187815|155188205 hsa-miR-1274b 0 0 1
chr1:155187815|155188205 hsa-miR-1285 0 0 1
chr1:155187815|155188205 hsa-miR-768-5p 0 0 1
chr1:155187815|155188205 hsa-miR-203 0 0 1
chr1:155187815|155188205 hsa-miR-326 1 0 0
chr1:155187815|155188205 hsa-miR-608 1 0 0
chr1:155187815|155188205 hsa-miR-623 0 1 0
chr1:155187815|155188205 hsa-miR-661 1 0 0
chr1:155187815|155188205 hsa-miR-762 1 1 0
chr1:155187815|155188205 hsa-miR-3132 1 0 0
chr1:155187815|155188205 hsa-miR-3138 1 0 0
chr1:155187815|155188205 hsa-miR-3141 1 0 0
chr1:155187815|155188205 hsa-miR-4322 1 1 0
chr1:155187815|155188205 hsa-miR-4281 1 0 0
chr1:155187815|155188205 hsa-miR-3652 1 0 0
chr1:155187815|155188205 hsa-miR-3911 1 1 0
chr1:155187815|155188205 hsa-miR-1268b 1 0 0
chr1:155187815|155188205 hsa-miR-4443 1 0 0
chr1:155187815|155188205 hsa-miR-4507 1 0 0
chr1:155187815|155188205 hsa-miR-4508 1 0 0
chr1:155187815|155188205 hsa-miR-4534 1 0 0
chr1:155187815|155188205 hsa-miR-1587 1 0 0
chr1:155187815|155188205 hsa-miR-4651 1 0 0
chr1:155187815|155188205 hsa-miR-4658 1 0 0
chr1:155187815|155188205 hsa-miR-4706 1 0 0
chr1:155187815|155188205 hsa-miR-4739 1 0 0
chr1:155187815|155188205 hsa-miR-4748 1 0 0
chr1:155187815|155188205 hsa-miR-5192 1 0 0
chr1:155187815|155188205 hsa-miR-5787 1 0 0
chr1:155187815|155188205 hsa-miR-6077 0 1 0
chr1:155187815|155188205 hsa-miR-6081 1 0 0
chr1:155187815|155188205 hsa-miR-6085 1 0 0
chr1:155187815|155188205 hsa-miR-6127 1 0 0
chr1:155187815|155188205 hsa-miR-6133 1 0 0
chr1:155187815|155188205 hsa-miR-6745 1 0 0
chr1:155187815|155188205 hsa-miR-6860 1 0 0
chr1:155187815|155188205 hsa-miR-8052 1 0 0
chr1:155187815|155188205 hsa-miR-12125 0 1 0
chr1:155187815|155188205 hsa-miR-150-3p 1 1 0
chr1:155187815|155188205 hsa-miR-4433b-3p 1 0 0
chr1:155187815|155188205 hsa-miR-93-3p 1 0 0
chr1:155187815|155188205 hsa-miR-504-3p 1 1 0
chr1:155187815|155188205 hsa-miR-4700-3p 1 0 0
chr1:155187815|155188205 hsa-miR-323a-5p 1 1 0
chr1:155187815|155188205 hsa-miR-4433a-3p 1 0 0
chr1:155187815|155188205 hsa-miR-7106-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6825-5p 1 1 0
chr1:155187815|155188205 hsa-miR-1972 0 1 0
chr1:155187815|155188205 hsa-miR-6892-3p 1 1 0
chr1:155187815|155188205 hsa-miR-6799-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6515-5p 1 1 0
chr1:155187815|155188205 hsa-miR-7160-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6741-5p 1 0 0
chr1:155187815|155188205 hsa-miR-8069 1 0 0
chr1:155187815|155188205 hsa-miR-6849-3p 1 0 0
chr1:155187815|155188205 hsa-miR-6783-5p 0 1 0
chr1:155187815|155188205 hsa-miR-6716-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6748-5p 1 1 0
chr1:155187815|155188205 hsa-miR-6732-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6805-5p 1 0 0
chr1:155187815|155188205 hsa-miR-3126-5p 0 1 0
chr1:155187815|155188205 hsa-miR-6782-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6821-5p 1 0 0
chr1:155187815|155188205 hsa-miR-345-3p 0 1 0
chr1:155187815|155188205 hsa-miR-3691-3p 1 0 0
chr1:155187815|155188205 hsa-miR-615-3p 1 0 0
chr1:155187815|155188205 hsa-miR-6835-5p 1 0 0
chr1:155187815|155188205 hsa-miR-939-3p 1 0 0
chr1:155187815|155188205 hsa-miR-7109-5p 1 0 0
chr1:155187815|155188205 hsa-miR-193b-5p 0 1 0
chr1:155187815|155188205 hsa-miR-4640-5p 1 0 0
chr1:155187815|155188205 hsa-miR-296-3p 0 1 0
chr1:155187815|155188205 hsa-miR-6771-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6834-5p 1 0 0
chr1:155187815|155188205 hsa-miR-4787-5p 1 0 0
chr1:155187815|155188205 hsa-miR-4446-5p 0 1 0
chr1:155187815|155188205 hsa-miR-149-3p 1 1 0
chr1:155187815|155188205 hsa-miR-937-5p 1 1 0
chr1:155187815|155188205 hsa-miR-6824-5p 1 0 0
chr1:155187815|155188205 hsa-miR-3162-5p 1 1 0
chr1:155187815|155188205 hsa-miR-146b-3p 0 1 0
chr1:155187815|155188205 hsa-miR-3158-5p 0 1 0
chr1:155187815|155188205 hsa-miR-1236-3p 1 0 0
chr1:155187815|155188205 hsa-miR-1911-3p 0 1 0
chr1:155187815|155188205 hsa-miR-7112-3p 1 0 0
chr1:155187815|155188205 hsa-miR-6872-3p 1 0 0
chr1:155187815|155188205 hsa-miR-4649-3p 1 0 0
chr1:155187815|155188205 hsa-miR-3124-3p 0 1 0
chr1:155187815|155188205 hsa-miR-6851-3p 1 0 0
chr1:155187815|155188205 hsa-miR-3620-3p 1 0 0
chr1:155187815|155188205 hsa-miR-5584-3p 0 1 0
chr1:155187815|155188205 hsa-miR-6734-3p 0 1 0
chr1:155187815|155188205 hsa-miR-6759-3p 1 0 0
chr1:155187815|155188205 hsa-miR-3680-3p 0 1 0
chr1:155187815|155188205 hsa-miR-329-5p 1 1 0
chr1:155187815|155188205 hsa-miR-6731-3p 1 0 0
chr1:155187815|155188205 hsa-miR-6885-3p 1 0 0
chr1:155187815|155188205 hsa-miR-5581-3p 0 1 0
chr1:155187815|155188205 hsa-miR-6769b-5p 1 1 0
chr1:155187815|155188205 hsa-miR-6812-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6752-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6754-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6756-5p 1 1 0
chr1:155187815|155188205 hsa-miR-6803-5p 1 1 0
chr1:155187815|155188205 hsa-miR-6813-5p 0 1 0
chr1:155187815|155188205 hsa-miR-6842-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6851-5p 1 0 0
chr1:155187815|155188205 hsa-miR-7110-5p 1 0 0
chr1:155187815|155188205 hsa-miR-10401-5p 1 0 0
chr1:155187815|155188205 hsa-miR-1249-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6751-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6763-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6779-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6780a-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6788-5p 0 1 0
chr1:155187815|155188205 hsa-miR-6797-5p 1 0 0
chr1:155187815|155188205 hsa-miR-7111-5p 1 0 0
chr1:155187815|155188205 hsa-miR-320a-5p 0 1 0
chr1:155187815|155188205 hsa-miR-3620-5p 1 0 0
chr1:155187815|155188205 hsa-miR-4728-5p 1 0 0
chr1:155187815|155188205 hsa-miR-5196-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6780b-5p 1 1 0
chr1:155187815|155188205 hsa-miR-4685-5p 0 1 0
chr1:155187815|155188205 hsa-miR-4701-3p 1 0 0
chr1:155187815|155188205 hsa-miR-4725-3p 1 0 0
chr1:155187815|155188205 hsa-miR-4726-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6729-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6794-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6795-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6846-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6848-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6858-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6883-5p 1 1 0
chr1:155187815|155188205 hsa-miR-6887-5p 0 1 0
chr1:155187815|155188205 hsa-miR-4723-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6885-5p 1 0 0
chr1:155187815|155188205 hsa-miR-365a-5p 1 0 0
chr1:155187815|155188205 hsa-miR-1199-5p 0 1 0
chr1:155187815|155188205 hsa-miR-4665-5p 1 1 0
chr1:155187815|155188205 hsa-miR-6736-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6766-5p 1 1 0
chr1:155187815|155188205 hsa-miR-6785-5p 0 1 0
chr1:155187815|155188205 hsa-miR-6724-5p 1 0 0
chr1:155187815|155188205 hsa-miR-6784-3p 0 1 0
chr1:155187815|155188205 hsa-miR-6810-3p 1 0 0
chr1:155187815|155188205 hsa-miR-5581-5p 0 1 0
chr1:155187815|155188205 hsa-miR-6744-3p 0 1 0
chr1:155187815|155188205 hsa-miR-6783-3p 1 0 0
chr1:155187815|155188205 hsa-miR-4690-3p 1 0 0
chr1:155187815|155188205 hsa-miR-4482-5p 0 1 0
chr1:155187815|155188205 hsa-miR-6874-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:155187815|155188205
ORF Type ORF1
Protein Length 72
Nucleotide Length 219
Protein Sequence MAWSQGNGHFSHGSQLWLSTLPPTLSAPVPPYGHDHHPPSNHHTGSTPRTVPELNIGEAQKTPLFINLQKLG
Nucleotide Sequence CTGGCCTGGTCACAGGGAAATGGGCACTTCAGCCACGGGTCCCAGCTCTGGCTCAGCACTCTTCCCCCAACCTTAAGTGCACCAGTCCCTCCCTACGGTCATGACCACCACCCACCCTCCAACCACCACACTGGGTCCACACCCAGAACTGTACCTGAACTTAATATTGGAGAGGCCCAGAAAACCCCCTTGTTTATAAATCTGCAAAAACTGGGGTGA
CircID chr1:155187815|155188205
ORF Type ORF2
Protein Length 38
Nucleotide Length 114
Protein Sequence MMQRVWTVLMAASGEHGEGKADTHHFRNVSLQLLVVVG
Nucleotide Sequence TTGATGCAAAGGGTGTGGACAGTTCTGATGGCTGCTTCAGGGGAGCATGGGGAAGGAAAGGCCGATACTCACCATTTCAGAAATGTCTCTCTGCAGCTCTTGGTAGTAGTCGGT
CircID chr1:155187815|155188205
ORF Type ORF3
Protein Length 30
Nucleotide Length 93
Protein Sequence MYHHRSWPGHREMGTSATGPSSGSALFPQP
Nucleotide Sequence TTGTACCACCACAGATCCTGGCCTGGTCACAGGGAAATGGGCACTTCAGCCACGGGTCCCAGCTCTGGCTCAGCACTCTTCCCCCAACCTTAA
CircID chr1:155187815|155188205
ORF Type ORF4
Protein Length 32
Nucleotide Length 99
Protein Sequence MTTTHPPTTTLGPHPELYLNLILERPRKPPCL
Nucleotide Sequence ATGACCACCACCCACCCTCCAACCACCACACTGGGTCCACACCCAGAACTGTACCTGAACTTAATATTGGAGAGGCCCAGAAAACCCCCTTGTTTATAA
CircID chr1:155187815|155188205
ORF Type ORF5
Protein Length 32
Nucleotide Length 99
Protein Sequence MVTGKWALQPRVPALAQHSSPNLKCTSPSLRS
Nucleotide Sequence CTGGTCACAGGGAAATGGGCACTTCAGCCACGGGTCCCAGCTCTGGCTCAGCACTCTTCCCCCAACCTTAAGTGCACCAGTCCCTCCCTACGGTCATGA
CircID chr1:155187815|155188205
ORF Type ORF6
Protein Length 27
Nucleotide Length 84
Protein Sequence MKQPSELSTPFASSLSPFPLTPVFADL
Nucleotide Sequence CTGAAGCAGCCATCAGAACTGTCCACACCCTTTGCATCAAGCCTGAGTCCTTTCCCTCTCACCCCAGTTTTTGCAGATTTATAA
CircID chr1:155187815|155188205
ORF Type ORF7
Protein Length 44
Nucleotide Length 135
Protein Sequence MQIYKQGGFLGLSNIKFRYSSGCGPSVVVGGWVVVMTVGRDWCT
Nucleotide Sequence TTGCAGATTTATAAACAAGGGGGTTTTCTGGGCCTCTCCAATATTAAGTTCAGGTACAGTTCTGGGTGTGGACCCAGTGTGGTGGTTGGAGGGTGGGTGGTGGTCATGACCGTAGGGAGGGACTGGTGCACTTAA
CircID chr1:155187815|155188205
ORF Type ORF8
Protein Length 31
Nucleotide Length 93
Protein Sequence MSQSWDPWLKCPFPCDQARICGGTIDSGLPR
Nucleotide Sequence CTGAGCCAGAGCTGGGACCCGTGGCTGAAGTGCCCATTTCCCTGTGACCAGGCCAGGATCTGTGGTGGTACAATTGACTCTGGCCTTCCGAGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab