CircRNA Information

General Information
circRNA Basic Information
CircID chr1:155188187|155188465
Strand +
CircType exon
Host Gene ENSG00000185499.15;
Algorism CIRI2;
Sequence GGCACCTCTGCCAGGGCTACCACAACCCCAGCCAGCAAGAGCACTCCATTCTCAATTCCCAGCCACCACTCTGATACTCCTACCACCCTTGCCAGCCATAGCACCAAGACTGATGCCAGTAGCACTCACCATAGCACGGTACCTCCTCTCACCTCCTCCAATCACAGCACTTCTCCCCAGTTGTCTACTGGGGTCTCTTTCTTTTTCCTGTCTTTTCACATTTCAAACCTCCAGTTTAATTCCTCTCTGGAAGATCCCAGCACCGACTACTACCAAGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:155188187|155188465 hsa-miR-31-5p 0 0 1
chr1:155188187|155188465 hsa-miR-31-3p 0 0 1
chr1:155188187|155188465 hsa-miR-122-5p 0 0 1
chr1:155188187|155188465 hsa-miR-122-3p 0 0 1
chr1:155188187|155188465 hsa-miR-302a-5p 0 0 1
chr1:155188187|155188465 hsa-miR-302a-3p 0 0 1
chr1:155188187|155188465 hsa-miR-302b-5p 0 0 1
chr1:155188187|155188465 hsa-miR-302b-3p 0 0 1
chr1:155188187|155188465 hsa-miR-302c-5p 0 0 1
chr1:155188187|155188465 hsa-miR-302c-3p 0 0 1
chr1:155188187|155188465 hsa-miR-302d-5p 0 0 1
chr1:155188187|155188465 hsa-miR-302d-3p 0 0 1
chr1:155188187|155188465 hsa-miR-372-5p 0 0 1
chr1:155188187|155188465 hsa-miR-372-3p 0 0 1
chr1:155188187|155188465 hsa-miR-373-5p 0 0 1
chr1:155188187|155188465 hsa-miR-373-3p 0 0 1
chr1:155188187|155188465 hsa-miR-135b-5p 0 0 1
chr1:155188187|155188465 hsa-miR-135b-3p 0 0 1
chr1:155188187|155188465 hsa-miR-193b-5p 0 0 1
chr1:155188187|155188465 hsa-miR-193b-3p 0 0 1
chr1:155188187|155188465 hsa-miR-520e-5p 0 0 1
chr1:155188187|155188465 hsa-miR-520e-3p 0 0 1
chr1:155188187|155188465 hsa-miR-520b-5p 0 0 1
chr1:155188187|155188465 hsa-miR-520b-3p 0 0 1
chr1:155188187|155188465 hsa-miR-580-5p 0 0 1
chr1:155188187|155188465 hsa-miR-580-3p 0 0 1
chr1:155188187|155188465 hsa-miR-622 1 0 1
chr1:155188187|155188465 hsa-miR-638 0 0 1
chr1:155188187|155188465 hsa-miR-411-5p 0 0 1
chr1:155188187|155188465 hsa-miR-411-3p 0 0 1
chr1:155188187|155188465 hsa-miR-765 1 1 1
chr1:155188187|155188465 hsa-miR-892b 0 0 1
chr1:155188187|155188465 hsa-miR-936 0 0 1
chr1:155188187|155188465 hsa-miR-939-5p 0 0 1
chr1:155188187|155188465 hsa-miR-939-3p 0 0 1
chr1:155188187|155188465 hsa-miR-1293 1 1 1
chr1:155188187|155188465 hsa-miR-1250-5p 0 0 1
chr1:155188187|155188465 hsa-miR-1250-3p 0 0 1
chr1:155188187|155188465 hsa-miR-548g-5p 0 0 1
chr1:155188187|155188465 hsa-miR-548g-3p 0 0 1
chr1:155188187|155188465 hsa-miR-302e 0 0 1
chr1:155188187|155188465 hsa-miR-512-3p 1 1 1
chr1:155188187|155188465 hsa-miR-361-5p 0 0 1
chr1:155188187|155188465 hsa-miR-525-5p 0 0 1
chr1:155188187|155188465 hsa-miR-509-3p 1 0 1
chr1:155188187|155188465 hsa-miR-1244 0 0 1
chr1:155188187|155188465 hsa-miR-520a-5p 0 1 1
chr1:155188187|155188465 hsa-miR-769-3p 0 1 1
chr1:155188187|155188465 hsa-miR-520d-3p 1 1 1
chr1:155188187|155188465 hsa-miR-450b-3p 0 0 1
chr1:155188187|155188465 hsa-miR-520a-3p 0 0 1
chr1:155188187|155188465 hsa-miR-520c-3p 0 0 1
chr1:155188187|155188465 hsa-miR-193a-3p 0 0 1
chr1:155188187|155188465 hsa-miR-1300 0 0 1
chr1:155188187|155188465 hsa-miR-135a 0 0 1
chr1:155188187|155188465 hsa-miR-129-3p 0 0 1
chr1:155188187|155188465 hsa-miR-768-5p 0 0 1
chr1:155188187|155188465 hsa-miR-203 0 0 1
chr1:155188187|155188465 hsa-miR-549 0 0 1
chr1:155188187|155188465 hsa-miR-198 0 1 0
chr1:155188187|155188465 hsa-miR-608 1 0 0
chr1:155188187|155188465 hsa-miR-637 1 0 0
chr1:155188187|155188465 hsa-miR-762 1 0 0
chr1:155188187|155188465 hsa-miR-1275 1 0 0
chr1:155188187|155188465 hsa-miR-3138 1 0 0
chr1:155188187|155188465 hsa-miR-3147 1 0 0
chr1:155188187|155188465 hsa-miR-3175 1 1 0
chr1:155188187|155188465 hsa-miR-4311 0 1 0
chr1:155188187|155188465 hsa-miR-3652 1 0 0
chr1:155188187|155188465 hsa-miR-3907 1 0 0
chr1:155188187|155188465 hsa-miR-3916 0 1 0
chr1:155188187|155188465 hsa-miR-3936 1 0 0
chr1:155188187|155188465 hsa-miR-4430 1 0 0
chr1:155188187|155188465 hsa-miR-4458 1 0 0
chr1:155188187|155188465 hsa-miR-3689c 1 0 0
chr1:155188187|155188465 hsa-miR-4481 1 0 0
chr1:155188187|155188465 hsa-miR-4498 1 0 0
chr1:155188187|155188465 hsa-miR-4505 1 1 0
chr1:155188187|155188465 hsa-miR-4510 1 0 0
chr1:155188187|155188465 hsa-miR-4525 1 0 0
chr1:155188187|155188465 hsa-miR-4533 1 0 0
chr1:155188187|155188465 hsa-miR-4534 1 0 0
chr1:155188187|155188465 hsa-miR-4642 0 1 0
chr1:155188187|155188465 hsa-miR-4651 1 0 0
chr1:155188187|155188465 hsa-miR-4656 1 0 0
chr1:155188187|155188465 hsa-miR-4673 1 0 0
chr1:155188187|155188465 hsa-miR-4675 1 0 0
chr1:155188187|155188465 hsa-miR-4706 1 0 0
chr1:155188187|155188465 hsa-miR-4710 1 0 0
chr1:155188187|155188465 hsa-miR-4739 1 1 0
chr1:155188187|155188465 hsa-miR-5093 1 0 0
chr1:155188187|155188465 hsa-miR-5192 1 0 0
chr1:155188187|155188465 hsa-miR-5698 1 1 0
chr1:155188187|155188465 hsa-miR-5787 1 1 0
chr1:155188187|155188465 hsa-miR-6086 1 0 0
chr1:155188187|155188465 hsa-miR-6124 0 1 0
chr1:155188187|155188465 hsa-miR-6127 1 0 0
chr1:155188187|155188465 hsa-miR-6133 1 0 0
chr1:155188187|155188465 hsa-miR-6134 1 1 0
chr1:155188187|155188465 hsa-miR-6860 1 0 0
chr1:155188187|155188465 hsa-miR-7150 1 0 0
chr1:155188187|155188465 hsa-miR-7974 1 0 0
chr1:155188187|155188465 hsa-miR-8073 0 1 0
chr1:155188187|155188465 hsa-miR-8074 1 0 0
chr1:155188187|155188465 hsa-miR-8085 1 0 0
chr1:155188187|155188465 hsa-miR-8089 1 1 0
chr1:155188187|155188465 hsa-miR-1843 1 0 0
chr1:155188187|155188465 hsa-miR-12115 1 0 0
chr1:155188187|155188465 hsa-miR-134-5p 1 0 0
chr1:155188187|155188465 hsa-miR-370-3p 1 0 0
chr1:155188187|155188465 hsa-miR-4433b-3p 1 0 0
chr1:155188187|155188465 hsa-miR-92a-1-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6734-5p 1 0 0
chr1:155188187|155188465 hsa-miR-4731-5p 1 0 0
chr1:155188187|155188465 hsa-miR-504-3p 1 0 0
chr1:155188187|155188465 hsa-miR-7155-5p 0 1 0
chr1:155188187|155188465 hsa-miR-6809-5p 0 1 0
chr1:155188187|155188465 hsa-miR-4433a-3p 1 0 0
chr1:155188187|155188465 hsa-miR-93-5p 1 0 0
chr1:155188187|155188465 hsa-miR-3150a-3p 1 1 0
chr1:155188187|155188465 hsa-miR-7106-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6825-5p 1 1 0
chr1:155188187|155188465 hsa-miR-6894-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6799-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6510-5p 1 0 0
chr1:155188187|155188465 hsa-miR-766-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6833-5p 1 1 0
chr1:155188187|155188465 hsa-miR-1236-5p 1 0 0
chr1:155188187|155188465 hsa-miR-7114-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6515-5p 1 0 0
chr1:155188187|155188465 hsa-miR-3192-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6880-5p 1 0 0
chr1:155188187|155188465 hsa-miR-7847-3p 1 1 0
chr1:155188187|155188465 hsa-miR-6746-5p 1 0 0
chr1:155188187|155188465 hsa-miR-4722-5p 1 0 0
chr1:155188187|155188465 hsa-miR-3064-5p 1 1 0
chr1:155188187|155188465 hsa-miR-7160-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6741-5p 1 0 0
chr1:155188187|155188465 hsa-miR-4474-3p 1 1 0
chr1:155188187|155188465 hsa-miR-3622b-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6842-3p 1 0 0
chr1:155188187|155188465 hsa-miR-6759-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6721-5p 1 0 0
chr1:155188187|155188465 hsa-miR-8069 1 0 0
chr1:155188187|155188465 hsa-miR-5589-5p 1 0 0
chr1:155188187|155188465 hsa-miR-7108-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6871-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6748-5p 1 0 0
chr1:155188187|155188465 hsa-miR-185-3p 1 0 0
chr1:155188187|155188465 hsa-miR-6732-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6805-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6760-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6782-5p 1 1 0
chr1:155188187|155188465 hsa-miR-6514-5p 1 1 0
chr1:155188187|155188465 hsa-miR-6835-5p 1 0 0
chr1:155188187|155188465 hsa-miR-7109-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6740-5p 1 0 0
chr1:155188187|155188465 hsa-miR-1909-5p 1 0 0
chr1:155188187|155188465 hsa-miR-30c-2-3p 1 0 0
chr1:155188187|155188465 hsa-miR-885-3p 1 0 0
chr1:155188187|155188465 hsa-miR-1908-5p 1 0 0
chr1:155188187|155188465 hsa-miR-296-3p 1 0 0
chr1:155188187|155188465 hsa-miR-6823-5p 1 0 0
chr1:155188187|155188465 hsa-miR-877-5p 1 0 0
chr1:155188187|155188465 hsa-miR-485-5p 1 0 0
chr1:155188187|155188465 hsa-miR-4787-5p 1 0 0
chr1:155188187|155188465 hsa-miR-4446-3p 1 0 0
chr1:155188187|155188465 hsa-miR-149-3p 1 0 0
chr1:155188187|155188465 hsa-miR-202-3p 1 0 0
chr1:155188187|155188465 hsa-miR-6824-5p 1 0 0
chr1:155188187|155188465 hsa-let-7e-5p 1 0 0
chr1:155188187|155188465 hsa-miR-616-3p 1 0 0
chr1:155188187|155188465 hsa-miR-4746-3p 1 0 0
chr1:155188187|155188465 hsa-miR-216a-3p 1 0 0
chr1:155188187|155188465 hsa-miR-483-5p 0 1 0
chr1:155188187|155188465 hsa-miR-1207-5p 1 0 0
chr1:155188187|155188465 hsa-miR-1233-5p 1 0 0
chr1:155188187|155188465 hsa-miR-3689b-3p 1 0 0
chr1:155188187|155188465 hsa-miR-4763-3p 1 0 0
chr1:155188187|155188465 hsa-miR-6769b-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6778-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6787-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6812-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6870-5p 1 0 0
chr1:155188187|155188465 hsa-miR-1343-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6737-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6752-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6754-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6756-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6803-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6819-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6851-5p 1 1 0
chr1:155188187|155188465 hsa-miR-7110-5p 1 0 0
chr1:155188187|155188465 hsa-miR-11181-3p 1 0 0
chr1:155188187|155188465 hsa-miR-1249-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6722-3p 1 0 0
chr1:155188187|155188465 hsa-miR-6751-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6763-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6779-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6788-5p 1 1 0
chr1:155188187|155188465 hsa-miR-6797-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6808-5p 1 0 0
chr1:155188187|155188465 hsa-miR-7111-5p 1 0 0
chr1:155188187|155188465 hsa-miR-3620-5p 1 0 0
chr1:155188187|155188465 hsa-miR-4728-5p 1 0 0
chr1:155188187|155188465 hsa-miR-5196-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6780b-5p 1 0 0
chr1:155188187|155188465 hsa-miR-1237-5p 1 0 0
chr1:155188187|155188465 hsa-miR-328-5p 1 0 0
chr1:155188187|155188465 hsa-miR-3689a-3p 1 0 0
chr1:155188187|155188465 hsa-miR-4649-5p 1 0 0
chr1:155188187|155188465 hsa-miR-4745-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6729-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6738-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6795-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6846-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6848-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6858-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6887-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6889-5p 1 0 0
chr1:155188187|155188465 hsa-miR-4723-5p 1 0 0
chr1:155188187|155188465 hsa-miR-3085-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6731-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6856-5p 1 1 0
chr1:155188187|155188465 hsa-miR-4665-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6736-5p 1 0 0
chr1:155188187|155188465 hsa-miR-6855-5p 1 1 0
chr1:155188187|155188465 hsa-miR-4700-5p 1 1 0
chr1:155188187|155188465 hsa-miR-4646-5p 1 1 0
chr1:155188187|155188465 hsa-miR-4716-3p 1 0 0
chr1:155188187|155188465 hsa-miR-6766-5p 1 0 0
chr1:155188187|155188465 hsa-miR-4667-5p 1 1 0
chr1:155188187|155188465 hsa-miR-6790-5p 1 0 0
chr1:155188187|155188465 hsa-miR-9851-5p 1 1 0
chr1:155188187|155188465 hsa-miR-320a-3p 1 0 0
chr1:155188187|155188465 hsa-miR-320b 1 0 0
chr1:155188187|155188465 hsa-miR-619-5p 0 1 0
chr1:155188187|155188465 hsa-miR-549a-3p 0 1 0
chr1:155188187|155188465 hsa-miR-5588-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:155188187|155188465
ORF Type ORF1
Protein Length 33
Nucleotide Length 99
Protein Sequence MSTGVSFFFLSFHISNLQFNSSLEDPSTDYYQE
Nucleotide Sequence TTGTCTACTGGGGTCTCTTTCTTTTTCCTGTCTTTTCACATTTCAAACCTCCAGTTTAATTCCTCTCTGGAAGATCCCAGCACCGACTACTACCAAGAG
CircID chr1:155188187|155188465
ORF Type ORF2
Protein Length 90
Nucleotide Length 270
Protein Sequence MPGLPQPQPARALHSQFPATTLILLPPLPAIAPRLMPVALTIARYLLSPPPITALLPSCLLGSLSFSCLFTFQTSSLIPLWKIPAPTTTK
Nucleotide Sequence CTGCCAGGGCTACCACAACCCCAGCCAGCAAGAGCACTCCATTCTCAATTCCCAGCCACCACTCTGATACTCCTACCACCCTTGCCAGCCATAGCACCAAGACTGATGCCAGTAGCACTCACCATAGCACGGTACCTCCTCTCACCTCCTCCAATCACAGCACTTCTCCCCAGTTGTCTACTGGGGTCTCTTTCTTTTTCCTGTCTTTTCACATTTCAAACCTCCAGTTTAATTCCTCTCTGGAAGATCCCAGCACCGACTACTACCAAG
CircID chr1:155188187|155188465
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MGRSAVIGGGERRYRAMVSATGISLGAMAGKGGRSIRVVAGN
Nucleotide Sequence CTGGGGAGAAGTGCTGTGATTGGAGGAGGTGAGAGGAGGTACCGTGCTATGGTGAGTGCTACTGGCATCAGTCTTGGTGCTATGGCTGGCAAGGGTGGTAGGAGTATCAGAGTGGTGGCTGGGAATTGA
CircID chr1:155188187|155188465
ORF Type ORF4
Protein Length 39
Nucleotide Length 117
Protein Sequence MASVLVLWLARVVGVSEWWLGIENGVLLLAGVVVALAEV
Nucleotide Sequence CTGGCATCAGTCTTGGTGCTATGGCTGGCAAGGGTGGTAGGAGTATCAGAGTGGTGGCTGGGAATTGAGAATGGAGTGCTCTTGCTGGCTGGGGTTGTGGTAGCCCTGGCAGAGGTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab