CircRNA Information

General Information
circRNA Basic Information
CircID chr1:155191986|155192171
Strand +
CircType exon
Host Gene ENSG00000185499.15;
Algorism CIRI2;
Sequence CAGCAGCGTACTCTCCAGCCACAGCCCCGGTTCAGGCTCCTCCACCACTCAGGGACAGGATGTCACTCTGGCCCCGGCCACGGAACCAGCTTCAGGTTCAGCTGCCACCTGGGGACAGGATGTCACCTCGGTCCCAGTCACCAGGCCAGCCCTGGGCTCCACCACCCCGCCAGCCCACGATGTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:155191986|155192171 hsa-miR-134-5p 0 0 1
chr1:155191986|155192171 hsa-miR-134-3p 0 0 1
chr1:155191986|155192171 hsa-miR-185-5p 0 0 1
chr1:155191986|155192171 hsa-miR-185-3p 0 0 1
chr1:155191986|155192171 hsa-miR-489-5p 0 0 1
chr1:155191986|155192171 hsa-miR-489-3p 0 0 1
chr1:155191986|155192171 hsa-miR-608 1 1 1
chr1:155191986|155192171 hsa-miR-765 0 0 1
chr1:155191986|155192171 hsa-miR-1204 0 1 1
chr1:155191986|155192171 hsa-miR-1293 0 0 1
chr1:155191986|155192171 hsa-miR-127-5p 0 0 1
chr1:155191986|155192171 hsa-miR-885-3p 0 0 1
chr1:155191986|155192171 hsa-miR-125a-5p 0 0 1
chr1:155191986|155192171 hsa-miR-125b 0 0 1
chr1:155191986|155192171 hsa-miR-663 0 0 1
chr1:155191986|155192171 hsa-miR-638 1 0 0
chr1:155191986|155192171 hsa-miR-663a 1 1 0
chr1:155191986|155192171 hsa-miR-762 1 1 0
chr1:155191986|155192171 hsa-miR-663b 1 0 0
chr1:155191986|155192171 hsa-miR-1538 1 0 0
chr1:155191986|155192171 hsa-miR-3176 1 1 0
chr1:155191986|155192171 hsa-miR-4299 0 1 0
chr1:155191986|155192171 hsa-miR-4322 1 0 0
chr1:155191986|155192171 hsa-miR-4265 1 0 0
chr1:155191986|155192171 hsa-miR-3652 0 1 0
chr1:155191986|155192171 hsa-miR-4421 1 0 0
chr1:155191986|155192171 hsa-miR-4430 0 1 0
chr1:155191986|155192171 hsa-miR-4440 1 0 0
chr1:155191986|155192171 hsa-miR-3135b 0 1 0
chr1:155191986|155192171 hsa-miR-3689e 1 1 0
chr1:155191986|155192171 hsa-miR-3689f 1 1 0
chr1:155191986|155192171 hsa-miR-4492 0 1 0
chr1:155191986|155192171 hsa-miR-4498 1 1 0
chr1:155191986|155192171 hsa-miR-4505 1 0 0
chr1:155191986|155192171 hsa-miR-4507 1 0 0
chr1:155191986|155192171 hsa-miR-4508 1 1 0
chr1:155191986|155192171 hsa-miR-1587 1 1 0
chr1:155191986|155192171 hsa-miR-4539 1 1 0
chr1:155191986|155192171 hsa-miR-4642 1 1 0
chr1:155191986|155192171 hsa-miR-4651 1 1 0
chr1:155191986|155192171 hsa-miR-4656 1 0 0
chr1:155191986|155192171 hsa-miR-4669 1 0 0
chr1:155191986|155192171 hsa-miR-4675 0 1 0
chr1:155191986|155192171 hsa-miR-4682 1 0 0
chr1:155191986|155192171 hsa-miR-4706 1 0 0
chr1:155191986|155192171 hsa-miR-4741 1 1 0
chr1:155191986|155192171 hsa-miR-5090 1 0 0
chr1:155191986|155192171 hsa-miR-5787 1 1 0
chr1:155191986|155192171 hsa-miR-6075 1 0 0
chr1:155191986|155192171 hsa-miR-6085 1 0 0
chr1:155191986|155192171 hsa-miR-8089 1 0 0
chr1:155191986|155192171 hsa-miR-12115 1 0 0
chr1:155191986|155192171 hsa-miR-6747-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4726-3p 0 1 0
chr1:155191986|155192171 hsa-miR-6765-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6894-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4687-3p 1 0 0
chr1:155191986|155192171 hsa-miR-218-1-3p 0 1 0
chr1:155191986|155192171 hsa-miR-6799-5p 1 0 0
chr1:155191986|155192171 hsa-miR-7114-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6089 1 0 0
chr1:155191986|155192171 hsa-miR-6880-5p 1 1 0
chr1:155191986|155192171 hsa-miR-1301-3p 1 0 0
chr1:155191986|155192171 hsa-miR-6741-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6727-5p 1 1 0
chr1:155191986|155192171 hsa-miR-4474-3p 1 1 0
chr1:155191986|155192171 hsa-miR-6759-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4655-5p 1 1 0
chr1:155191986|155192171 hsa-miR-6742-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6748-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6793-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6796-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6829-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6827-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6782-5p 1 1 0
chr1:155191986|155192171 hsa-miR-6821-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6735-3p 1 0 0
chr1:155191986|155192171 hsa-miR-345-3p 1 0 0
chr1:155191986|155192171 hsa-miR-6786-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4793-5p 1 1 0
chr1:155191986|155192171 hsa-miR-3944-3p 1 0 0
chr1:155191986|155192171 hsa-miR-6784-5p 1 1 0
chr1:155191986|155192171 hsa-miR-4640-5p 0 1 0
chr1:155191986|155192171 hsa-miR-3127-5p 1 0 0
chr1:155191986|155192171 hsa-miR-1228-5p 1 0 0
chr1:155191986|155192171 hsa-miR-296-3p 1 0 0
chr1:155191986|155192171 hsa-miR-3677-3p 1 1 0
chr1:155191986|155192171 hsa-miR-6749-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4446-3p 1 1 0
chr1:155191986|155192171 hsa-miR-6824-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4724-5p 0 1 0
chr1:155191986|155192171 hsa-miR-744-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6748-3p 0 1 0
chr1:155191986|155192171 hsa-miR-3670 0 1 0
chr1:155191986|155192171 hsa-miR-1306-3p 1 0 0
chr1:155191986|155192171 hsa-miR-670-5p 0 1 0
chr1:155191986|155192171 hsa-miR-10400-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4763-3p 1 0 0
chr1:155191986|155192171 hsa-miR-6769b-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6787-5p 1 1 0
chr1:155191986|155192171 hsa-miR-6865-5p 0 1 0
chr1:155191986|155192171 hsa-miR-6870-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6775-5p 1 0 0
chr1:155191986|155192171 hsa-miR-1343-5p 1 0 0
chr1:155191986|155192171 hsa-miR-5001-5p 1 1 0
chr1:155191986|155192171 hsa-miR-6737-5p 1 1 0
chr1:155191986|155192171 hsa-miR-6752-5p 1 1 0
chr1:155191986|155192171 hsa-miR-6756-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6803-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6813-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6815-5p 0 1 0
chr1:155191986|155192171 hsa-miR-6819-5p 1 1 0
chr1:155191986|155192171 hsa-miR-6851-5p 1 0 0
chr1:155191986|155192171 hsa-miR-7110-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6751-5p 1 0 0
chr1:155191986|155192171 hsa-miR-3620-5p 1 1 0
chr1:155191986|155192171 hsa-miR-10396a-5p 1 0 0
chr1:155191986|155192171 hsa-miR-10396b-5p 1 1 0
chr1:155191986|155192171 hsa-miR-1909-3p 1 0 0
chr1:155191986|155192171 hsa-miR-328-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4685-5p 1 1 0
chr1:155191986|155192171 hsa-miR-4726-5p 1 1 0
chr1:155191986|155192171 hsa-miR-4749-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6846-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6848-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4723-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6845-5p 0 1 0
chr1:155191986|155192171 hsa-miR-939-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4758-5p 1 1 0
chr1:155191986|155192171 hsa-miR-5586-3p 0 1 0
chr1:155191986|155192171 hsa-miR-3940-5p 1 0 0
chr1:155191986|155192171 hsa-miR-1199-5p 1 0 0
chr1:155191986|155192171 hsa-miR-4665-5p 1 0 0
chr1:155191986|155192171 hsa-miR-3184-5p 1 1 0
chr1:155191986|155192171 hsa-miR-6790-5p 1 0 0
chr1:155191986|155192171 hsa-miR-550a-5p 1 0 0
chr1:155191986|155192171 hsa-miR-6762-5p 1 1 0
chr1:155191986|155192171 hsa-miR-6764-5p 0 1 0
chr1:155191986|155192171 hsa-miR-3922-3p 0 1 0
chr1:155191986|155192171 hsa-miR-3689a-5p 1 1 0
chr1:155191986|155192171 hsa-miR-3689b-5p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:155191986|155192171
ORF Type ORF1
Protein Length 26
Nucleotide Length 78
Protein Sequence MGTGCHLGPSHQASPGLHHPASPRCH
Nucleotide Sequence CTGGGGACAGGATGTCACCTCGGTCCCAGTCACCAGGCCAGCCCTGGGCTCCACCACCCCGCCAGCCCACGATGTCAC
CircID chr1:155191986|155192171
ORF Type ORF2
Protein Length 39
Nucleotide Length 117
Protein Sequence MAPATEPASGSAATWGQDVTSVPVTRPALGSTTPPAHDV
Nucleotide Sequence CTGGCCCCGGCCACGGAACCAGCTTCAGGTTCAGCTGCCACCTGGGGACAGGATGTCACCTCGGTCCCAGTCACCAGGCCAGCCCTGGGCTCCACCACCCCGCCAGCCCACGATGTC
CircID chr1:155191986|155192171
ORF Type ORF3
Protein Length 42
Nucleotide Length 126
Protein Sequence MSLWPRPRNQLQVQLPPGDRMSPRSQSPGQPWAPPPRQPTMS
Nucleotide Sequence ATGTCACTCTGGCCCCGGCCACGGAACCAGCTTCAGGTTCAGCTGCCACCTGGGGACAGGATGTCACCTCGGTCCCAGTCACCAGGCCAGCCCTGGGCTCCACCACCCCGCCAGCCCACGATGTCA
CircID chr1:155191986|155192171
ORF Type ORF4
Protein Length 31
Nucleotide Length 96
Protein Sequence MVTGTEVTSCPQVAAEPEAGSVAGARVTSCP
Nucleotide Sequence CTGGTGACTGGGACCGAGGTGACATCCTGTCCCCAGGTGGCAGCTGAACCTGAAGCTGGTTCCGTGGCCGGGGCCAGAGTGACATCCTGTCCCTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab