CircRNA Information

General Information
circRNA Basic Information
CircID chr1:155254428|155254680
Strand -
CircType exon
Host Gene ENSG00000160767.19;
Algorism CIRI2;
Sequence ACAATGCCAACCACCCCGGAGAACGCCAGCTGGGGACAGAGTGGGCACAGGCTCAGCCTGGCAGGGGAGGCTCCTGAGTGAGCCCCTCACCACAGGATGCACCCAGCCCTGTAAGGAGGCAGAGGACCAGGAGAGGGAGGAGAGGCAAGCATGTGGACTTGCAGCTGGTGTGGAGGGTGGGGCCCGAGGAGCCTCCCCCACCCAACAACTGTGCACCCAACTCACCGAGAACCCAGCCCAAGACGGGCAGGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:155254428|155254680 hsa-miR-510-5p 0 0 1
chr1:155254428|155254680 hsa-miR-510-3p 0 0 1
chr1:155254428|155254680 hsa-miR-571 0 0 1
chr1:155254428|155254680 hsa-miR-600 0 0 1
chr1:155254428|155254680 hsa-miR-608 0 0 1
chr1:155254428|155254680 hsa-miR-625-5p 0 0 1
chr1:155254428|155254680 hsa-miR-625-3p 0 0 1
chr1:155254428|155254680 hsa-miR-635 0 0 1
chr1:155254428|155254680 hsa-miR-1226-5p 0 0 1
chr1:155254428|155254680 hsa-miR-1226-3p 0 0 1
chr1:155254428|155254680 hsa-miR-1293 0 1 1
chr1:155254428|155254680 hsa-miR-1256 0 0 1
chr1:155254428|155254680 hsa-miR-1262 0 0 1
chr1:155254428|155254680 hsa-miR-1275 0 0 1
chr1:155254428|155254680 hsa-miR-296-5p 0 1 1
chr1:155254428|155254680 hsa-miR-324-5p 0 0 1
chr1:155254428|155254680 hsa-miR-423-5p 0 0 1
chr1:155254428|155254680 hsa-miR-1207-3p 0 0 1
chr1:155254428|155254680 hsa-miR-331-3p 0 0 1
chr1:155254428|155254680 hsa-miR-876-3p 0 0 1
chr1:155254428|155254680 hsa-miR-642 0 0 1
chr1:155254428|155254680 hsa-miR-219-1-3p 0 0 1
chr1:155254428|155254680 hsa-miR-636 1 0 0
chr1:155254428|155254680 hsa-miR-762 0 1 0
chr1:155254428|155254680 hsa-miR-764 1 0 0
chr1:155254428|155254680 hsa-miR-940 1 0 0
chr1:155254428|155254680 hsa-miR-1976 1 0 0
chr1:155254428|155254680 hsa-miR-3183 1 0 0
chr1:155254428|155254680 hsa-miR-4259 0 1 0
chr1:155254428|155254680 hsa-miR-4326 1 0 0
chr1:155254428|155254680 hsa-miR-4268 1 0 0
chr1:155254428|155254680 hsa-miR-4279 1 1 0
chr1:155254428|155254680 hsa-miR-3909 0 1 0
chr1:155254428|155254680 hsa-miR-4469 1 1 0
chr1:155254428|155254680 hsa-miR-4478 0 1 0
chr1:155254428|155254680 hsa-miR-4492 0 1 0
chr1:155254428|155254680 hsa-miR-4498 0 1 0
chr1:155254428|155254680 hsa-miR-4505 0 1 0
chr1:155254428|155254680 hsa-miR-1587 1 1 0
chr1:155254428|155254680 hsa-miR-4651 1 1 0
chr1:155254428|155254680 hsa-miR-4741 1 0 0
chr1:155254428|155254680 hsa-miR-5787 1 1 0
chr1:155254428|155254680 hsa-miR-103a-2-5p 0 1 0
chr1:155254428|155254680 hsa-miR-6749-3p 1 1 0
chr1:155254428|155254680 hsa-miR-6836-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6861-5p 1 0 0
chr1:155254428|155254680 hsa-miR-6892-3p 1 1 0
chr1:155254428|155254680 hsa-miR-874-5p 1 1 0
chr1:155254428|155254680 hsa-miR-6741-5p 0 1 0
chr1:155254428|155254680 hsa-miR-5589-5p 0 1 0
chr1:155254428|155254680 hsa-miR-6776-5p 0 1 0
chr1:155254428|155254680 hsa-miR-7110-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6787-3p 1 0 0
chr1:155254428|155254680 hsa-miR-1915-5p 1 0 0
chr1:155254428|155254680 hsa-miR-6845-3p 1 1 0
chr1:155254428|155254680 hsa-miR-6793-5p 1 0 0
chr1:155254428|155254680 hsa-miR-877-3p 1 1 0
chr1:155254428|155254680 hsa-miR-185-3p 0 1 0
chr1:155254428|155254680 hsa-miR-4655-3p 1 0 0
chr1:155254428|155254680 hsa-miR-2467-5p 0 1 0
chr1:155254428|155254680 hsa-miR-6728-3p 1 0 0
chr1:155254428|155254680 hsa-miR-7855-5p 0 1 0
chr1:155254428|155254680 hsa-miR-4713-5p 1 0 0
chr1:155254428|155254680 hsa-miR-7109-3p 0 1 0
chr1:155254428|155254680 hsa-miR-1343-3p 1 1 0
chr1:155254428|155254680 hsa-miR-939-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6772-3p 1 0 0
chr1:155254428|155254680 hsa-miR-3944-3p 0 1 0
chr1:155254428|155254680 hsa-miR-1229-5p 1 0 0
chr1:155254428|155254680 hsa-miR-6894-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6803-3p 1 0 0
chr1:155254428|155254680 hsa-miR-5001-3p 1 1 0
chr1:155254428|155254680 hsa-miR-7113-3p 1 0 0
chr1:155254428|155254680 hsa-miR-296-3p 1 1 0
chr1:155254428|155254680 hsa-miR-3667-3p 1 1 0
chr1:155254428|155254680 hsa-miR-642b-5p 1 0 0
chr1:155254428|155254680 hsa-miR-6878-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6818-3p 1 1 0
chr1:155254428|155254680 hsa-miR-7111-3p 1 1 0
chr1:155254428|155254680 hsa-miR-6780a-3p 1 1 0
chr1:155254428|155254680 hsa-miR-4667-3p 1 0 0
chr1:155254428|155254680 hsa-miR-4446-3p 0 1 0
chr1:155254428|155254680 hsa-miR-1306-5p 1 0 0
chr1:155254428|155254680 hsa-miR-4646-3p 1 0 0
chr1:155254428|155254680 hsa-miR-211-5p 1 0 0
chr1:155254428|155254680 hsa-miR-4707-5p 1 0 0
chr1:155254428|155254680 hsa-miR-1236-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6811-3p 0 1 0
chr1:155254428|155254680 hsa-miR-6889-3p 0 1 0
chr1:155254428|155254680 hsa-miR-4758-3p 0 1 0
chr1:155254428|155254680 hsa-miR-1238-3p 1 0 0
chr1:155254428|155254680 hsa-miR-2276-5p 1 1 0
chr1:155254428|155254680 hsa-miR-6895-3p 1 0 0
chr1:155254428|155254680 hsa-miR-501-5p 1 0 0
chr1:155254428|155254680 hsa-miR-6826-3p 0 1 0
chr1:155254428|155254680 hsa-miR-1914-5p 0 1 0
chr1:155254428|155254680 hsa-miR-4749-3p 1 0 0
chr1:155254428|155254680 hsa-miR-502-5p 1 0 0
chr1:155254428|155254680 hsa-miR-3124-3p 0 1 0
chr1:155254428|155254680 hsa-miR-204-5p 1 0 0
chr1:155254428|155254680 hsa-miR-6767-3p 1 1 0
chr1:155254428|155254680 hsa-miR-4433a-5p 0 1 0
chr1:155254428|155254680 hsa-miR-6734-3p 1 0 0
chr1:155254428|155254680 hsa-miR-642a-5p 1 1 0
chr1:155254428|155254680 hsa-miR-6800-3p 1 0 0
chr1:155254428|155254680 hsa-miR-3162-3p 0 1 0
chr1:155254428|155254680 hsa-miR-3664-5p 0 1 0
chr1:155254428|155254680 hsa-miR-3152-5p 0 1 0
chr1:155254428|155254680 hsa-miR-4716-5p 1 0 0
chr1:155254428|155254680 hsa-miR-5001-5p 0 1 0
chr1:155254428|155254680 hsa-miR-6737-5p 0 1 0
chr1:155254428|155254680 hsa-miR-6756-5p 1 0 0
chr1:155254428|155254680 hsa-miR-7111-5p 0 1 0
chr1:155254428|155254680 hsa-miR-4685-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6754-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6852-3p 0 1 0
chr1:155254428|155254680 hsa-miR-6866-3p 1 0 0
chr1:155254428|155254680 hsa-miR-3620-5p 1 1 0
chr1:155254428|155254680 hsa-miR-3940-5p 1 0 0
chr1:155254428|155254680 hsa-miR-1199-5p 0 1 0
chr1:155254428|155254680 hsa-miR-6791-3p 1 0 0
chr1:155254428|155254680 hsa-miR-4472 0 1 0
chr1:155254428|155254680 hsa-miR-6766-5p 0 1 0
chr1:155254428|155254680 hsa-miR-3184-5p 0 1 0
chr1:155254428|155254680 hsa-miR-2682-3p 1 1 0
chr1:155254428|155254680 hsa-miR-6756-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6792-3p 0 1 0
chr1:155254428|155254680 hsa-miR-6801-3p 0 1 0
chr1:155254428|155254680 hsa-miR-6829-3p 1 0 0
chr1:155254428|155254680 hsa-miR-3059-5p 1 0 0
chr1:155254428|155254680 hsa-miR-4723-3p 1 0 0
chr1:155254428|155254680 hsa-miR-483-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6751-3p 0 1 0
chr1:155254428|155254680 hsa-miR-6769b-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6823-3p 0 1 0
chr1:155254428|155254680 hsa-miR-6891-3p 1 0 0
chr1:155254428|155254680 hsa-miR-6744-3p 1 1 0
chr1:155254428|155254680 hsa-miR-6783-3p 1 0 0
chr1:155254428|155254680 hsa-miR-10394-5p 1 1 0
chr1:155254428|155254680 hsa-miR-6781-3p 1 0 0
chr1:155254428|155254680 hsa-miR-103a-1-5p 0 1 0
chr1:155254428|155254680 hsa-miR-5699-3p 1 0 0
chr1:155254428|155254680 hsa-miR-412-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr1:155254428|155254680
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MPTTPENASWGQSGHRLSLAGEAPE
Nucleotide Sequence ATGCCAACCACCCCGGAGAACGCCAGCTGGGGACAGAGTGGGCACAGGCTCAGCCTGGCAGGGGAGGCTCCTGAGTGA

CircID chr1:155254428|155254680
ORF Type ORF2
Protein Length 34
Nucleotide Length 102
Protein Sequence MWTCSWCGGWGPRSLPHPTTVHPTHREPSPRRAG
Nucleotide Sequence ATGTGGACTTGCAGCTGGTGTGGAGGGTGGGGCCCGAGGAGCCTCCCCCACCCAACAACTGTGCACCCAACTCACCGAGAACCCAGCCCAAGACGGGCAGGA

CircID chr1:155254428|155254680
ORF Type ORF3
Protein Length 60
Nucleotide Length 180
Protein Sequence MSEPLTTGCTQPCKEAEDQEREERQACGLAAGVEGGARGASPTQQLCTQLTENPAQDGQD
Nucleotide Sequence CTGAGTGAGCCCCTCACCACAGGATGCACCCAGCCCTGTAAGGAGGCAGAGGACCAGGAGAGGGAGGAGAGGCAAGCATGTGGACTTGCAGCTGGTGTGGAGGGTGGGGCCCGAGGAGCCTCCCCCACCCAACAACTGTGCACCCAACTCACCGAGAACCCAGCCCAAGACGGGCAGGAC

CircID chr1:155254428|155254680
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MQLVWRVGPEEPPPPNNCAPNSPRTQPKTGR
Nucleotide Sequence TTGCAGCTGGTGTGGAGGGTGGGGCCCGAGGAGCCTCCCCCACCCAACAACTGTGCACCCAACTCACCGAGAACCCAGCCCAAGACGGGCAGG

CircID chr1:155254428|155254680
ORF Type ORF5
Protein Length 65
Nucleotide Length 198
Protein Sequence MPVLGWVLGELGAQLLGGGGSSGPTLHTSCKSTCLPLLPLLVLCLLTGLGASCGEGLTQEPPLPG
Nucleotide Sequence CTGCCCGTCTTGGGCTGGGTTCTCGGTGAGTTGGGTGCACAGTTGTTGGGTGGGGGAGGCTCCTCGGGCCCCACCCTCCACACCAGCTGCAAGTCCACATGCTTGCCTCTCCTCCCTCTCCTGGTCCTCTGCCTCCTTACAGGGCTGGGTGCATCCTGTGGTGAGGGGCTCACTCAGGAGCCTCCCCTGCCAGGCTGA

CircID chr1:155254428|155254680
ORF Type ORF6
Protein Length 25
Nucleotide Length 78
Protein Sequence MQVHMLASPPSPGPLPPYRAGCILW
Nucleotide Sequence CTGCAAGTCCACATGCTTGCCTCTCCTCCCTCTCCTGGTCCTCTGCCTCCTTACAGGGCTGGGTGCATCCTGTGGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites