CircNet

General Information

circRNA Basic Information

CircID	chr1:155915873\|155921918
Strand	-
CircType	exon
Host Gene	ENSG00000132680.10;
Algorism	find_circ;CIRI2;CIRC
Sequence	GTTCATGCTGAATACTCTAGATTTGTGAATCAGATTAATACTGCTGTACCTTTACCAGGCTATACACAACCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTACCCTGTTGTTCCCCCTCCTCAGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTGTTTCATTAGCACCTGGAGTCTTGCCGGCATTACCTACTGGAGTCCCACCTGTGCCAACACAATACCCGATAACACAAGTGCAGCCTCCAGCTAGCACTGGACAGAGTCCGATGGGTGGTCCTTTTATTCCTGCTGCTCCTGTCAAAACTGCCTTGCCTGCTGGCCCCCAGCCCCAGCCCCAGCCCCAGCCCCCACTCCCAAGTCAGCCCCAGGCACAGAAGAGACGATTCACAGAGGAGCTACCAGATGAACGGGAATCTGGACTGCTTGGATACCAGCATGGACCCATTCATATGACTAATTTAGGTACAGGCTTCTCCAGTCAGAATGAGATTGAAGGTGCAGGATCGAAGCCAGCAAGTTCCTCAGGCAAAGAGAGAGAGAGGGACAGGCAGTTGATGCCTCCACCAGCCTTTCCAGTGACTGGAATAAAAACAGAGTCCGATGAAAGGAATGGGTCTGGGACCTTAACAGGGAGCCATG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:155915873\|155921918	hsa-miR-134-5p	0	1	1
chr1:155915873\|155921918	hsa-miR-125b-2-3p	0	1	1

Target Genes

Note about Function Analysis:
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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:155915873\|155921918
ORF Type	ORF1
Protein Length	222
Nucleotide Length	666
Protein Sequence	VNQINTAVPLPGYTQPSAISSVPPQPPYYPSNGYQSGYPVVPPPQQPVQPPYGVPSIVPPAVSLAPGVLPALPTGVPPVPTQYPITQVQPPASTGQSPMGGPFIPAAPVKTALPAGPQPQPQPQPPLPSQPQAQKRRFTEELPDERESGLLGYQHGPIHMTNLGTGFSSQNEIEGAGSKPASSSGKERERDRQLMPPPAFPVTGIKTESDERNGSGTLTGSH
Nucleotide Sequence	GTGAATCAGATTAATACTGCTGTACCTTTACCAGGCTATACACAACCCTCTGCTATAAGTAGTGTCCCTCCTCAACCACCATATTATCCATCCAATGGCTATCAGTCTGGTTACCCTGTTGTTCCCCCTCCTCAGCAGCCAGTTCAACCTCCCTACGGAGTACCAAGCATAGTGCCACCAGCTGTTTCATTAGCACCTGGAGTCTTGCCGGCATTACCTACTGGAGTCCCACCTGTGCCAACACAATACCCGATAACACAAGTGCAGCCTCCAGCTAGCACTGGACAGAGTCCGATGGGTGGTCCTTTTATTCCTGCTGCTCCTGTCAAAACTGCCTTGCCTGCTGGCCCCCAGCCCCAGCCCCAGCCCCAGCCCCCACTCCCAAGTCAGCCCCAGGCACAGAAGAGACGATTCACAGAGGAGCTACCAGATGAACGGGAATCTGGACTGCTTGGATACCAGCATGGACCCATTCATATGACTAATTTAGGTACAGGCTTCTCCAGTCAGAATGAGATTGAAGGTGCAGGATCGAAGCCAGCAAGTTCCTCAGGCAAAGAGAGAGAGAGGGACAGGCAGTTGATGCCTCCACCAGCCTTTCCAGTGACTGGAATAAAAACAGAGTCCGATGAAAGGAATGGGTCTGGGACCTTAACAGGGAGCCAT

CircID	chr1:155915873\|155921918
ORF Type	ORF2
Protein Length	54
Nucleotide Length	162
Protein Sequence	MPARLQVLMKQLVALCLVLRREVELAAEEGEQQGNQTDSHWMDNMVVEEGHYL*
Nucleotide Sequence	ATGCCGGCAAGACTCCAGGTGCTAATGAAACAGCTGGTGGCACTATGCTTGGTACTCCGTAGGGAGGTTGAACTGGCTGCTGAGGAGGGGGAACAACAGGGTAACCAGACTGATAGCCATTGGATGGATAATATGGTGGTTGAGGAGGGACACTACTTATAG

CircID	chr1:155915873\|155921918
ORF Type	ORF3
Protein Length	59
Nucleotide Length	177
Protein Sequence	LTGAAGIKGPPIGLCPVLAGGCTCVIGYCVGTGGTPVGNAGKTPGANETAGGTMLGTP*
Nucleotide Sequence	TTGACAGGAGCAGCAGGAATAAAAGGACCACCCATCGGACTCTGTCCAGTGCTAGCTGGAGGCTGCACTTGTGTTATCGGGTATTGTGTTGGCACAGGTGGGACTCCAGTAGGTAATGCCGGCAAGACTCCAGGTGCTAATGAAACAGCTGGTGGCACTATGCTTGGTACTCCGTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:155915873\|155921918	SAFB2	0	5	0
chr1:155915873\|155921918	GTF2F1	0	3	0
chr1:155915873\|155921918	NOP56	3	4	0
chr1:155915873\|155921918	MOV10	0	3	1
chr1:155915873\|155921918	ELAVL1	3	15	6
chr1:155915873\|155921918	ZNF184	0	3	5
chr1:155915873\|155921918	DDX42	0	1	0
chr1:155915873\|155921918	SF3B4	1	2	1
chr1:155915873\|155921918	FAM120A	0	3	1
chr1:155915873\|155921918	KHDRBS1	0	11	0
chr1:155915873\|155921918	CNBP	1	1	1
chr1:155915873\|155921918	SLBP	0	1	0
chr1:155915873\|155921918	ATXN2	0	2	0
chr1:155915873\|155921918	TAF15	0	11	0
chr1:155915873\|155921918	FMR1	0	4	4
chr1:155915873\|155921918	CPSF6	0	6	0
chr1:155915873\|155921918	NUDT21	0	3	0
chr1:155915873\|155921918	VIM	0	2	1
chr1:155915873\|155921918	TROVE2	0	2	0
chr1:155915873\|155921918	FUS	1	8	0
chr1:155915873\|155921918	GNL3	1	2	0
chr1:155915873\|155921918	DGCR8	0	1	0
chr1:155915873\|155921918	SRSF7	0	1	2
chr1:155915873\|155921918	CPSF4	0	1	0
chr1:155915873\|155921918	SRSF1	3	26	19
chr1:155915873\|155921918	NOP58	1	6	10
chr1:155915873\|155921918	SRSF3	0	1	0
chr1:155915873\|155921918	U2AF1	2	3	5
chr1:155915873\|155921918	TNRC6A	0	1	0
chr1:155915873\|155921918	U2AF2	9	40	14
chr1:155915873\|155921918	SRSF9	0	1	4
chr1:155915873\|155921918	HNRNPU	0	12	0
chr1:155915873\|155921918	DDX54	0	4	18
chr1:155915873\|155921918	LSM11	0	1	0
chr1:155915873\|155921918	HNRNPK	0	1	5
chr1:155915873\|155921918	PCBP2	0	0	3
chr1:155915873\|155921918	HNRNPM	0	1	0
chr1:155915873\|155921918	AUH	0	1	0
chr1:155915873\|155921918	FIP1L1	0	1	0
chr1:155915873\|155921918	MBNL2	0	5	0
chr1:155915873\|155921918	HNRNPC	7	3	0
chr1:155915873\|155921918	HNRNPD	0	1	0
chr1:155915873\|155921918	YWHAG	1	1	1
chr1:155915873\|155921918	HNRNPA2B1	0	8	0
chr1:155915873\|155921918	DHX9	5	0	1
chr1:155915873\|155921918	HNRNPA1	4	28	0
chr1:155915873\|155921918	DDX3X	0	1	0
chr1:155915873\|155921918	WDR33	0	1	0
chr1:155915873\|155921918	KHSRP	0	3	0
chr1:155915873\|155921918	RBM10	1	4	0
chr1:155915873\|155921918	ACIN1	3	10	15
chr1:155915873\|155921918	LIN28B	0	15	1
chr1:155915873\|155921918	RANGAP1	0	2	0
chr1:155915873\|155921918	FXR1	0	1	1
chr1:155915873\|155921918	FXR2	0	1	0
chr1:155915873\|155921918	TIA1	0	2	0
chr1:155915873\|155921918	NUMA1	0	8	0
chr1:155915873\|155921918	IGF2BP1	0	0	8
chr1:155915873\|155921918	DICER1	3	0	0
chr1:155915873\|155921918	IGF2BP3	0	5	3
chr1:155915873\|155921918	IGF2BP2	2	6	15
chr1:155915873\|155921918	FTO	1	1	0
chr1:155915873\|155921918	TARDBP	4	0	3
chr1:155915873\|155921918	FBL	0	4	7
chr1:155915873\|155921918	BUD13	0	1	6
chr1:155915873\|155921918	RBFOX2	0	1	3
chr1:155915873\|155921918	PRPF8	0	5	1
chr1:155915873\|155921918	RTCB	0	0	1
chr1:155915873\|155921918	RBM47	0	0	3
chr1:155915873\|155921918	CSTF2T	0	10	5
chr1:155915873\|155921918	BCCIP	0	1	0
chr1:155915873\|155921918	TRA2A	0	0	3
chr1:155915873\|155921918	TARBP2	1	0	0
chr1:155915873\|155921918	CPSF7	0	1	0
chr1:155915873\|155921918	EIF4A3	2	7	11
chr1:155915873\|155921918	XRN2	0	2	1
chr1:155915873\|155921918	EIF4G2	0	0	1
chr1:155915873\|155921918	AIFM1	0	1	1
chr1:155915873\|155921918	AGO1	0	0	1
chr1:155915873\|155921918	ADAR	0	6	0
chr1:155915873\|155921918	ILF3	1	0	1
chr1:155915873\|155921918	AGO2	0	2	4

CircRNA Information