CircRNA Information

General Information
circRNA Basic Information
CircID chr1:156134931|156135257
Strand +
CircType exon
Host Gene ENSG00000160789.18;
Algorism CIRI2;
Sequence TGCTGCAGCTCCTCGTGGGCAGCCCCCACCAGGTTGCTGTTCCTCTCAGCAGACTGCCTGGCATTGTCCAGCTGGAGGGGAGGACAAAGGGTTAGGACTGTGGTGACTGGGAGGGGTGGAGGCACAGGCCTGAGTTGGGCATCACTGCTACAGCCCCAGGTCCTGGGCCACCCTGAGCTCCCTGCCACCATCTGCCTGATCCCCAGAAGGCATAGCCCAGCGTGGGTAAGGGTAGGGCTGCCAAGGGCAGAGGCAGTGAGGGAACCAATCGAGAGCAAGCACCTTGGCAGAATAAGTCTTCTCCAGCTCCTTCTTATACTGCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:156134931|156135257 hsa-miR-18a-5p 0 0 1
chr1:156134931|156135257 hsa-miR-18a-3p 0 0 1
chr1:156134931|156135257 hsa-miR-107 0 0 1
chr1:156134931|156135257 hsa-miR-197-5p 0 0 1
chr1:156134931|156135257 hsa-miR-197-3p 0 0 1
chr1:156134931|156135257 hsa-miR-18b-5p 0 0 1
chr1:156134931|156135257 hsa-miR-18b-3p 0 0 1
chr1:156134931|156135257 hsa-miR-492 0 0 1
chr1:156134931|156135257 hsa-miR-510-5p 0 0 1
chr1:156134931|156135257 hsa-miR-510-3p 0 0 1
chr1:156134931|156135257 hsa-miR-558 0 0 1
chr1:156134931|156135257 hsa-miR-622 1 1 1
chr1:156134931|156135257 hsa-miR-631 0 0 1
chr1:156134931|156135257 hsa-miR-636 1 1 1
chr1:156134931|156135257 hsa-miR-637 0 0 1
chr1:156134931|156135257 hsa-miR-659-5p 0 0 1
chr1:156134931|156135257 hsa-miR-659-3p 0 0 1
chr1:156134931|156135257 hsa-miR-766-5p 0 0 1
chr1:156134931|156135257 hsa-miR-766-3p 0 0 1
chr1:156134931|156135257 hsa-miR-541-5p 0 0 1
chr1:156134931|156135257 hsa-miR-541-3p 0 0 1
chr1:156134931|156135257 hsa-miR-708-5p 0 0 1
chr1:156134931|156135257 hsa-miR-708-3p 0 0 1
chr1:156134931|156135257 hsa-miR-920 0 1 1
chr1:156134931|156135257 hsa-miR-938 0 0 1
chr1:156134931|156135257 hsa-miR-1237-5p 0 0 1
chr1:156134931|156135257 hsa-miR-1237-3p 0 0 1
chr1:156134931|156135257 hsa-miR-663b 0 1 1
chr1:156134931|156135257 hsa-miR-1253 0 0 1
chr1:156134931|156135257 hsa-miR-1266-5p 0 0 1
chr1:156134931|156135257 hsa-miR-1266-3p 0 0 1
chr1:156134931|156135257 hsa-miR-885-3p 0 0 1
chr1:156134931|156135257 hsa-miR-1184 0 0 1
chr1:156134931|156135257 hsa-miR-490-3p 0 0 1
chr1:156134931|156135257 hsa-miR-654-5p 0 0 1
chr1:156134931|156135257 hsa-miR-532-5p 0 0 1
chr1:156134931|156135257 hsa-miR-509-3p 0 0 1
chr1:156134931|156135257 hsa-miR-28-5p 0 0 1
chr1:156134931|156135257 hsa-miR-1207-3p 0 0 1
chr1:156134931|156135257 hsa-miR-140-3p 0 0 1
chr1:156134931|156135257 hsa-miR-1207-5p 0 1 1
chr1:156134931|156135257 hsa-miR-324-3p 0 0 1
chr1:156134931|156135257 hsa-miR-151-5p 0 0 1
chr1:156134931|156135257 hsa-miR-220b 0 0 1
chr1:156134931|156135257 hsa-miR-550 0 0 1
chr1:156134931|156135257 hsa-miR-642 0 0 1
chr1:156134931|156135257 hsa-miR-103 0 0 1
chr1:156134931|156135257 hsa-miR-346 0 1 0
chr1:156134931|156135257 hsa-miR-612 1 0 0
chr1:156134931|156135257 hsa-miR-638 1 1 0
chr1:156134931|156135257 hsa-miR-151b 0 1 0
chr1:156134931|156135257 hsa-miR-935 1 0 0
chr1:156134931|156135257 hsa-miR-1538 0 1 0
chr1:156134931|156135257 hsa-miR-4270 0 1 0
chr1:156134931|156135257 hsa-miR-3661 0 1 0
chr1:156134931|156135257 hsa-miR-3916 0 1 0
chr1:156134931|156135257 hsa-miR-4447 0 1 0
chr1:156134931|156135257 hsa-miR-4514 0 1 0
chr1:156134931|156135257 hsa-miR-4531 0 1 0
chr1:156134931|156135257 hsa-miR-4656 1 0 0
chr1:156134931|156135257 hsa-miR-4688 1 0 0
chr1:156134931|156135257 hsa-miR-4692 0 1 0
chr1:156134931|156135257 hsa-miR-4706 1 0 0
chr1:156134931|156135257 hsa-miR-4741 1 1 0
chr1:156134931|156135257 hsa-miR-5092 0 1 0
chr1:156134931|156135257 hsa-miR-6081 1 1 0
chr1:156134931|156135257 hsa-miR-6085 1 1 0
chr1:156134931|156135257 hsa-miR-7150 0 1 0
chr1:156134931|156135257 hsa-miR-7974 1 0 0
chr1:156134931|156135257 hsa-miR-8087 0 1 0
chr1:156134931|156135257 hsa-miR-8089 1 1 0
chr1:156134931|156135257 hsa-miR-12118 1 1 0
chr1:156134931|156135257 hsa-miR-6749-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6840-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6836-3p 0 1 0
chr1:156134931|156135257 hsa-miR-212-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6857-5p 0 1 0
chr1:156134931|156135257 hsa-miR-218-1-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6854-5p 0 1 0
chr1:156134931|156135257 hsa-miR-4755-3p 0 1 0
chr1:156134931|156135257 hsa-miR-185-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6829-5p 1 1 0
chr1:156134931|156135257 hsa-miR-656-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6798-5p 1 0 0
chr1:156134931|156135257 hsa-miR-6735-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6882-3p 0 1 0
chr1:156134931|156135257 hsa-miR-3934-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6852-5p 0 1 0
chr1:156134931|156135257 hsa-miR-4640-5p 1 0 0
chr1:156134931|156135257 hsa-miR-6514-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6749-5p 1 0 0
chr1:156134931|156135257 hsa-miR-4638-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6811-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6889-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6887-3p 0 1 0
chr1:156134931|156135257 hsa-miR-1910-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6872-3p 1 0 0
chr1:156134931|156135257 hsa-miR-3140-3p 1 0 0
chr1:156134931|156135257 hsa-miR-1914-5p 0 1 0
chr1:156134931|156135257 hsa-miR-204-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6851-3p 0 1 0
chr1:156134931|156135257 hsa-miR-4750-3p 1 0 0
chr1:156134931|156135257 hsa-miR-6779-3p 1 0 0
chr1:156134931|156135257 hsa-miR-4772-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6732-3p 1 0 0
chr1:156134931|156135257 hsa-miR-6890-3p 0 1 0
chr1:156134931|156135257 hsa-miR-3162-3p 0 1 0
chr1:156134931|156135257 hsa-miR-4650-5p 0 1 0
chr1:156134931|156135257 hsa-miR-4763-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6726-5p 1 1 0
chr1:156134931|156135257 hsa-miR-6754-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6756-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6803-5p 1 0 0
chr1:156134931|156135257 hsa-miR-6722-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6751-5p 0 1 0
chr1:156134931|156135257 hsa-miR-3620-5p 1 0 0
chr1:156134931|156135257 hsa-miR-5189-5p 1 1 0
chr1:156134931|156135257 hsa-miR-6780b-5p 1 0 0
chr1:156134931|156135257 hsa-miR-328-5p 1 0 0
chr1:156134931|156135257 hsa-miR-449c-5p 0 1 0
chr1:156134931|156135257 hsa-miR-4685-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6846-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6848-5p 0 1 0
chr1:156134931|156135257 hsa-miR-939-5p 0 1 0
chr1:156134931|156135257 hsa-miR-34b-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6511a-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6856-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6877-3p 1 1 0
chr1:156134931|156135257 hsa-miR-4700-5p 0 1 0
chr1:156134931|156135257 hsa-miR-4667-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6791-5p 0 1 0
chr1:156134931|156135257 hsa-miR-7107-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6529-3p 0 1 0
chr1:156134931|156135257 hsa-miR-6859-5p 0 1 0
chr1:156134931|156135257 hsa-miR-151a-5p 0 1 0
chr1:156134931|156135257 hsa-miR-2682-5p 0 1 0
chr1:156134931|156135257 hsa-miR-6737-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:156134931|156135257
ORF Type ORF1
Protein Length 98
Nucleotide Length 294
Protein Sequence MLFLSADCLALSSWRGGQRVRTVVTGRGGGTGLSWASLLQPQVLGHPELPATICLIPRRHSPAWVRVGLPRAEAVREPIESKHLGRISLLQLLLILLH
Nucleotide Sequence TTGCTGTTCCTCTCAGCAGACTGCCTGGCATTGTCCAGCTGGAGGGGAGGACAAAGGGTTAGGACTGTGGTGACTGGGAGGGGTGGAGGCACAGGCCTGAGTTGGGCATCACTGCTACAGCCCCAGGTCCTGGGCCACCCTGAGCTCCCTGCCACCATCTGCCTGATCCCCAGAAGGCATAGCCCAGCGTGGGTAAGGGTAGGGCTGCCAAGGGCAGAGGCAGTGAGGGAACCAATCGAGAGCAAGCACCTTGGCAGAATAAGTCTTCTCCAGCTCCTTCTTATACTGCTCCAC
CircID chr1:156134931|156135257
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence LQLLVGSPHQVAVPLSRLPGIVQLEGRTKG
Nucleotide Sequence CTGCAGCTCCTCGTGGGCAGCCCCCACCAGGTTGCTGTTCCTCTCAGCAGACTGCCTGGCATTGTCCAGCTGGAGGGGAGGACAAAGGGTTAG
CircID chr1:156134931|156135257
ORF Type ORF3
Protein Length 52
Nucleotide Length 159
Protein Sequence MEKTYSAKVLALDWFPHCLCPWQPYPYPRWAMPSGDQADGGRELRVAQDLGL
Nucleotide Sequence CTGGAGAAGACTTATTCTGCCAAGGTGCTTGCTCTCGATTGGTTCCCTCACTGCCTCTGCCCTTGGCAGCCCTACCCTTACCCACGCTGGGCTATGCCTTCTGGGGATCAGGCAGATGGTGGCAGGGAGCTCAGGGTGGCCCAGGACCTGGGGCTGTAG
CircID chr1:156134931|156135257
ORF Type ORF4
Protein Length 96
Nucleotide Length 288
Protein Sequence MPRCLLSIGSLTASALGSPTLTHAGLCLLGIRQMVAGSSGWPRTWGCSSDAQLRPVPPPLPVTTVLTLCPPLQLDNARQSAERNSNLVGAAHEELQ
Nucleotide Sequence CTGCCAAGGTGCTTGCTCTCGATTGGTTCCCTCACTGCCTCTGCCCTTGGCAGCCCTACCCTTACCCACGCTGGGCTATGCCTTCTGGGGATCAGGCAGATGGTGGCAGGGAGCTCAGGGTGGCCCAGGACCTGGGGCTGTAGCAGTGATGCCCAACTCAGGCCTGTGCCTCCACCCCTCCCAGTCACCACAGTCCTAACCCTTTGTCCTCCCCTCCAGCTGGACAATGCCAGGCAGTCTGCTGAGAGGAACAGCAACCTGGTGGGGGCTGCCCACGAGGAGCTGCAG
CircID chr1:156134931|156135257
ORF Type ORF5
Protein Length 58
Nucleotide Length 177
Protein Sequence MVPSLPLPLAALPLPTLGYAFWGSGRWWQGAQGGPGPGAVAVMPNSGLCLHPSQSPQS
Nucleotide Sequence TTGGTTCCCTCACTGCCTCTGCCCTTGGCAGCCCTACCCTTACCCACGCTGGGCTATGCCTTCTGGGGATCAGGCAGATGGTGGCAGGGAGCTCAGGGTGGCCCAGGACCTGGGGCTGTAGCAGTGATGCCCAACTCAGGCCTGTGCCTCCACCCCTCCCAGTCACCACAGTCCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab