CircRNA Information

General Information
circRNA Basic Information
CircID chr1:156293010|156293172
Strand +
CircType exon
Host Gene ENSG00000163472.17;
Algorism CIRI2;
Sequence GGCTTGTCCCCACTAGTCCTGGGCATCATGGCAGTGGCCCTGGGTGCCCCAGGGCTCATGCTGCTAGGGGGCGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTACCAGTCCATAAATTAAGGCCCGCTCTCTGGAGGGAAGGACATTACTGAAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:156293010|156293172 hsa-miR-15a-5p 0 0 1
chr1:156293010|156293172 hsa-miR-15a-3p 0 0 1
chr1:156293010|156293172 hsa-miR-107 0 1 1
chr1:156293010|156293172 hsa-miR-15b-5p 0 0 1
chr1:156293010|156293172 hsa-miR-15b-3p 0 0 1
chr1:156293010|156293172 hsa-miR-195-5p 0 0 1
chr1:156293010|156293172 hsa-miR-195-3p 0 0 1
chr1:156293010|156293172 hsa-miR-424-5p 0 0 1
chr1:156293010|156293172 hsa-miR-424-3p 0 0 1
chr1:156293010|156293172 hsa-miR-497-5p 0 0 1
chr1:156293010|156293172 hsa-miR-497-3p 0 0 1
chr1:156293010|156293172 hsa-miR-503-5p 0 0 1
chr1:156293010|156293172 hsa-miR-503-3p 0 0 1
chr1:156293010|156293172 hsa-miR-578 0 0 1
chr1:156293010|156293172 hsa-miR-581 0 0 1
chr1:156293010|156293172 hsa-miR-646 0 0 1
chr1:156293010|156293172 hsa-miR-922 0 0 1
chr1:156293010|156293172 hsa-miR-1288-5p 0 0 1
chr1:156293010|156293172 hsa-miR-1288-3p 0 0 1
chr1:156293010|156293172 hsa-miR-1322 0 0 1
chr1:156293010|156293172 hsa-miR-1225-3p 0 0 1
chr1:156293010|156293172 hsa-miR-491-5p 0 0 1
chr1:156293010|156293172 hsa-miR-486-3p 0 0 1
chr1:156293010|156293172 hsa-miR-525-5p 0 1 1
chr1:156293010|156293172 hsa-miR-520a-5p 0 1 1
chr1:156293010|156293172 hsa-miR-1233 0 0 1
chr1:156293010|156293172 hsa-miR-642 0 0 1
chr1:156293010|156293172 hsa-miR-103 0 0 1
chr1:156293010|156293172 hsa-miR-16 0 0 1
chr1:156293010|156293172 hsa-miR-1269 0 0 1
chr1:156293010|156293172 hsa-miR-762 1 0 0
chr1:156293010|156293172 hsa-miR-1286 0 1 0
chr1:156293010|156293172 hsa-miR-2861 1 0 0
chr1:156293010|156293172 hsa-miR-3131 1 0 0
chr1:156293010|156293172 hsa-miR-4313 0 1 0
chr1:156293010|156293172 hsa-miR-4292 0 1 0
chr1:156293010|156293172 hsa-miR-3907 1 0 0
chr1:156293010|156293172 hsa-miR-3918 0 1 0
chr1:156293010|156293172 hsa-miR-3921 0 1 0
chr1:156293010|156293172 hsa-miR-4515 1 1 0
chr1:156293010|156293172 hsa-miR-1587 1 0 0
chr1:156293010|156293172 hsa-miR-5572 1 0 0
chr1:156293010|156293172 hsa-miR-6840-3p 1 1 0
chr1:156293010|156293172 hsa-miR-4697-3p 1 0 0
chr1:156293010|156293172 hsa-miR-6810-5p 0 1 0
chr1:156293010|156293172 hsa-miR-6852-5p 0 1 0
chr1:156293010|156293172 hsa-miR-3667-3p 1 0 0
chr1:156293010|156293172 hsa-miR-6749-5p 1 1 0
chr1:156293010|156293172 hsa-miR-103a-3p 0 1 0
chr1:156293010|156293172 hsa-miR-3944-5p 0 1 0
chr1:156293010|156293172 hsa-miR-508-5p 1 0 0
chr1:156293010|156293172 hsa-miR-4632-3p 0 1 0
chr1:156293010|156293172 hsa-miR-6746-3p 0 1 0
chr1:156293010|156293172 hsa-miR-509-3p 1 0 0
chr1:156293010|156293172 hsa-miR-6734-3p 0 1 0
chr1:156293010|156293172 hsa-miR-6890-3p 0 1 0
chr1:156293010|156293172 hsa-miR-5001-5p 1 0 0
chr1:156293010|156293172 hsa-miR-4755-5p 1 1 0
chr1:156293010|156293172 hsa-miR-1915-3p 0 1 0
chr1:156293010|156293172 hsa-miR-3620-5p 1 0 0
chr1:156293010|156293172 hsa-miR-4685-5p 1 1 0
chr1:156293010|156293172 hsa-miR-6773-5p 0 1 0
chr1:156293010|156293172 hsa-miR-324-3p 0 1 0
chr1:156293010|156293172 hsa-miR-10398-3p 1 0 0
chr1:156293010|156293172 hsa-miR-6791-5p 0 1 0
chr1:156293010|156293172 hsa-miR-6805-3p 1 0 0
chr1:156293010|156293172 hsa-miR-6837-5p 0 1 0
chr1:156293010|156293172 hsa-miR-6817-5p 0 1 0
chr1:156293010|156293172 hsa-miR-6764-5p 0 1 0
chr1:156293010|156293172 hsa-miR-6838-5p 0 1 0
chr1:156293010|156293172 hsa-miR-4524a-5p 0 1 0
chr1:156293010|156293172 hsa-miR-4524b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:156293010|156293172
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MSPLVLGIMAVALGAPGLMLLGGGLVLLLHHKKYSEYQSIN
Nucleotide Sequence TTGTCCCCACTAGTCCTGGGCATCATGGCAGTGGCCCTGGGTGCCCCAGGGCTCATGCTGCTAGGGGGCGGCTTGGTTCTGCTGCTGCACCACAAGAAGTACTCAGAGTACCAGTCCATAAATTAA
CircID chr1:156293010|156293172
ORF Type ORF2
Protein Length 40
Nucleotide Length 120
Protein Sequence MDWYSEYFLWCSSRTKPPPSSMSPGAPRATAMMPRTSGDK
Nucleotide Sequence ATGGACTGGTACTCTGAGTACTTCTTGTGGTGCAGCAGCAGAACCAAGCCGCCCCCTAGCAGCATGAGCCCTGGGGCACCCAGGGCCACTGCCATGATGCCCAGGACTAGTGGGGACAAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab