CircNet

General Information

circRNA Basic Information

CircID	chr1:15638307\|15656679
Strand	+
CircType	exon
Host Gene	ENSG00000197312.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	GCAACAGAACATTGAGGAAAACATGACAATAGCTATGGAAGAGGCTCCGGAAAGTTTTGGCCAAGTAGTGATGCTTTATATTAACTGCAAAGTGAATGGACATCCTGTGAAAGCCTTTGTTGACTCAGAGCGTCAGAAGCCATGATGCATGTAGTGTGTGTGTACTGCAGCTGGAGTGGGCCCCAGACCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr1:15638307\|15656679	hsa-miR-17-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr1:15638307\|15656679
ORF Type	ORF1
Protein Length	41
Nucleotide Length	123
Protein Sequence	MTIAMEEAPESFGQVVMLYINCKVNGHPVKAFVDSERQKP*
Nucleotide Sequence	ATGACAATAGCTATGGAAGAGGCTCCGGAAAGTTTTGGCCAAGTAGTGATGCTTTATATTAACTGCAAAGTGAATGGACATCCTGTGAAAGCCTTTGTTGACTCAGAGCGTCAGAAGCCATGA

CircID	chr1:15638307\|15656679
ORF Type	ORF2
Protein Length	34
Nucleotide Length	102
Protein Sequence	MSIHFAVNIKHHYLAKTFRSLFHSYCHVFLNVLL
Nucleotide Sequence	ATGTCCATTCACTTTGCAGTTAATATAAAGCATCACTACTTGGCCAAAACTTTCCGGAGCCTCTTCCATAGCTATTGTCATGTTTTCCTCAATGTTCTGTTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr1:15638307\|15656679	KHSRP	3	3	0
chr1:15638307\|15656679	ELAVL1	7	4	3
chr1:15638307\|15656679	DHX9	0	2	0
chr1:15638307\|15656679	SF3B4	2	0	0
chr1:15638307\|15656679	CELF2	0	1	2
chr1:15638307\|15656679	PRPF8	4	4	1
chr1:15638307\|15656679	TAF15	1	2	0
chr1:15638307\|15656679	FMR1	0	1	2
chr1:15638307\|15656679	CPSF6	1	1	1
chr1:15638307\|15656679	TIA1	0	1	0
chr1:15638307\|15656679	TROVE2	1	1	0
chr1:15638307\|15656679	FUS	3	3	0
chr1:15638307\|15656679	GNL3	0	1	1
chr1:15638307\|15656679	DGCR8	1	0	0
chr1:15638307\|15656679	SRSF7	1	1	0
chr1:15638307\|15656679	SRSF1	0	1	2
chr1:15638307\|15656679	NOP58	1	0	0
chr1:15638307\|15656679	U2AF1	1	0	4
chr1:15638307\|15656679	U2AF2	14	2	6
chr1:15638307\|15656679	SRSF9	0	0	2
chr1:15638307\|15656679	NOP56	1	0	0
chr1:15638307\|15656679	DDX54	0	0	4
chr1:15638307\|15656679	LSM11	0	1	0
chr1:15638307\|15656679	HNRNPK	0	2	0
chr1:15638307\|15656679	HNRNPL	0	1	0
chr1:15638307\|15656679	HNRNPUL1	1	1	0
chr1:15638307\|15656679	SF3A3	3	0	1
chr1:15638307\|15656679	PTBP1	7	2	3
chr1:15638307\|15656679	HNRNPC	18	3	0
chr1:15638307\|15656679	HNRNPD	1	0	0
chr1:15638307\|15656679	TRA2A	2	1	0
chr1:15638307\|15656679	ZNF184	0	0	1
chr1:15638307\|15656679	DDX3X	0	0	1
chr1:15638307\|15656679	SMNDC1	2	0	0
chr1:15638307\|15656679	MSI2	0	0	1
chr1:15638307\|15656679	HNRNPA1	3	1	0
chr1:15638307\|15656679	LIN28B	0	1	2
chr1:15638307\|15656679	FXR1	0	0	1
chr1:15638307\|15656679	FXR2	0	0	1
chr1:15638307\|15656679	SND1	1	0	0
chr1:15638307\|15656679	GTF2F1	0	1	0
chr1:15638307\|15656679	IGF2BP3	0	1	2
chr1:15638307\|15656679	IGF2BP2	0	3	2
chr1:15638307\|15656679	AUH	1	0	0
chr1:15638307\|15656679	TARDBP	0	2	2
chr1:15638307\|15656679	BUD13	1	1	2
chr1:15638307\|15656679	RBFOX2	1	0	0
chr1:15638307\|15656679	SLTM	1	0	0
chr1:15638307\|15656679	DDX42	0	0	1
chr1:15638307\|15656679	CSTF2T	0	1	1
chr1:15638307\|15656679	BCCIP	0	0	1
chr1:15638307\|15656679	YWHAG	0	2	0
chr1:15638307\|15656679	RBM22	0	3	0
chr1:15638307\|15656679	EIF4A3	4	4	3
chr1:15638307\|15656679	FBL	1	0	1

CircRNA Information