CircRNA Information

General Information
circRNA Basic Information
CircID chr1:156592197|156592471
Strand -
CircType exon
Host Gene ENSG00000163382.10;
Algorism CIRI2;
Sequence AGCCATCGCCAAGGTCAGTGGCACAACTCTCGACCTTTGGGAGCAGCCAGGGAGGAGTCACTGTCCCAGCCCCCTGGCCTAGGCACAAAGGGGTGGGAGAGACAGCTGGGCCAATATGGTCTATTACCGCCTGAAACCCCGCCGAACCACCCTTGACTCTGCCTTCAGGCATATCCCCCCACGTCCATGTCCAGGAGCCCCCCTACTGTCCTGGTCATCTGTGGCCCGGGGAATAATGGAGGAGATGGTCTGGTCTGTGCTCGACACCTCAAACT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:156592197|156592471 hsa-miR-136-5p 0 0 1
chr1:156592197|156592471 hsa-miR-136-3p 0 0 1
chr1:156592197|156592471 hsa-miR-150-5p 0 0 1
chr1:156592197|156592471 hsa-miR-150-3p 0 0 1
chr1:156592197|156592471 hsa-miR-328-5p 0 0 1
chr1:156592197|156592471 hsa-miR-328-3p 0 0 1
chr1:156592197|156592471 hsa-miR-593-5p 0 0 1
chr1:156592197|156592471 hsa-miR-593-3p 0 0 1
chr1:156592197|156592471 hsa-miR-604 0 0 1
chr1:156592197|156592471 hsa-miR-626 0 0 1
chr1:156592197|156592471 hsa-miR-647 0 0 1
chr1:156592197|156592471 hsa-miR-1227-5p 0 0 1
chr1:156592197|156592471 hsa-miR-1227-3p 0 0 1
chr1:156592197|156592471 hsa-miR-1293 0 1 1
chr1:156592197|156592471 hsa-miR-1304-5p 0 0 1
chr1:156592197|156592471 hsa-miR-1304-3p 0 0 1
chr1:156592197|156592471 hsa-miR-1279 0 0 1
chr1:156592197|156592471 hsa-miR-532-3p 0 1 1
chr1:156592197|156592471 hsa-miR-1224-3p 0 0 1
chr1:156592197|156592471 hsa-miR-532-5p 0 0 1
chr1:156592197|156592471 hsa-miR-876-3p 0 0 1
chr1:156592197|156592471 hsa-miR-885-5p 0 0 1
chr1:156592197|156592471 hsa-miR-1302 0 0 1
chr1:156592197|156592471 hsa-miR-1260 0 0 1
chr1:156592197|156592471 hsa-miR-1280 0 0 1
chr1:156592197|156592471 hsa-miR-550 0 0 1
chr1:156592197|156592471 hsa-miR-1201 0 0 1
chr1:156592197|156592471 hsa-miR-663 0 0 1
chr1:156592197|156592471 hsa-miR-608 1 0 0
chr1:156592197|156592471 hsa-miR-663a 1 0 0
chr1:156592197|156592471 hsa-miR-762 0 1 0
chr1:156592197|156592471 hsa-miR-933 1 0 0
chr1:156592197|156592471 hsa-miR-1260a 0 1 0
chr1:156592197|156592471 hsa-miR-1469 1 0 0
chr1:156592197|156592471 hsa-miR-3135a 0 1 0
chr1:156592197|156592471 hsa-miR-3138 0 1 0
chr1:156592197|156592471 hsa-miR-3937 1 1 0
chr1:156592197|156592471 hsa-miR-3945 1 0 0
chr1:156592197|156592471 hsa-miR-4505 0 1 0
chr1:156592197|156592471 hsa-miR-4525 0 1 0
chr1:156592197|156592471 hsa-miR-4651 1 0 0
chr1:156592197|156592471 hsa-miR-4706 1 0 0
chr1:156592197|156592471 hsa-miR-6125 1 0 0
chr1:156592197|156592471 hsa-miR-6860 0 1 0
chr1:156592197|156592471 hsa-miR-8055 1 0 0
chr1:156592197|156592471 hsa-miR-8072 1 0 0
chr1:156592197|156592471 hsa-miR-12122 0 1 0
chr1:156592197|156592471 hsa-miR-6749-3p 0 1 0
chr1:156592197|156592471 hsa-miR-15a-3p 0 1 0
chr1:156592197|156592471 hsa-miR-4433a-3p 1 0 0
chr1:156592197|156592471 hsa-miR-6765-5p 1 0 0
chr1:156592197|156592471 hsa-miR-3663-3p 1 0 0
chr1:156592197|156592471 hsa-miR-6089 1 0 0
chr1:156592197|156592471 hsa-miR-6730-5p 0 1 0
chr1:156592197|156592471 hsa-miR-6762-3p 1 1 0
chr1:156592197|156592471 hsa-miR-181a-2-3p 0 1 0
chr1:156592197|156592471 hsa-miR-23b-5p 0 1 0
chr1:156592197|156592471 hsa-miR-7110-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6845-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6742-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6796-5p 1 0 0
chr1:156592197|156592471 hsa-miR-185-3p 1 0 0
chr1:156592197|156592471 hsa-miR-23a-5p 1 1 0
chr1:156592197|156592471 hsa-miR-6798-5p 0 1 0
chr1:156592197|156592471 hsa-miR-2467-3p 1 0 0
chr1:156592197|156592471 hsa-miR-6782-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6786-5p 1 0 0
chr1:156592197|156592471 hsa-miR-7109-5p 0 1 0
chr1:156592197|156592471 hsa-miR-3944-3p 1 0 0
chr1:156592197|156592471 hsa-miR-193b-5p 0 1 0
chr1:156592197|156592471 hsa-miR-6753-5p 1 1 0
chr1:156592197|156592471 hsa-miR-619-3p 0 1 0
chr1:156592197|156592471 hsa-miR-1908-5p 1 0 0
chr1:156592197|156592471 hsa-miR-7113-3p 0 1 0
chr1:156592197|156592471 hsa-miR-1228-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6771-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6823-5p 1 0 0
chr1:156592197|156592471 hsa-miR-7854-3p 1 0 0
chr1:156592197|156592471 hsa-miR-6818-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6802-5p 1 0 0
chr1:156592197|156592471 hsa-miR-550b-2-5p 0 1 0
chr1:156592197|156592471 hsa-miR-1236-3p 0 1 0
chr1:156592197|156592471 hsa-miR-4750-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6814-5p 0 1 0
chr1:156592197|156592471 hsa-miR-1295b-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6895-3p 0 1 0
chr1:156592197|156592471 hsa-miR-34a-5p 1 0 0
chr1:156592197|156592471 hsa-miR-493-3p 0 1 0
chr1:156592197|156592471 hsa-miR-4645-3p 0 1 0
chr1:156592197|156592471 hsa-miR-5587-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6502-3p 0 1 0
chr1:156592197|156592471 hsa-miR-1207-5p 1 0 0
chr1:156592197|156592471 hsa-miR-4763-3p 1 0 0
chr1:156592197|156592471 hsa-miR-6787-5p 1 1 0
chr1:156592197|156592471 hsa-miR-6816-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6893-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6775-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6737-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6752-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6756-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6803-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6819-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6722-3p 1 0 0
chr1:156592197|156592471 hsa-miR-6808-5p 1 0 0
chr1:156592197|156592471 hsa-miR-186-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6836-5p 1 0 0
chr1:156592197|156592471 hsa-miR-10396b-5p 1 0 0
chr1:156592197|156592471 hsa-miR-1909-3p 1 0 0
chr1:156592197|156592471 hsa-miR-4632-5p 1 0 0
chr1:156592197|156592471 hsa-miR-4649-5p 1 0 0
chr1:156592197|156592471 hsa-miR-4749-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6795-5p 0 1 0
chr1:156592197|156592471 hsa-miR-6846-5p 1 1 0
chr1:156592197|156592471 hsa-miR-6848-5p 1 1 0
chr1:156592197|156592471 hsa-miR-3187-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6831-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6885-5p 0 1 0
chr1:156592197|156592471 hsa-miR-1910-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6511a-5p 1 1 0
chr1:156592197|156592471 hsa-miR-3940-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6855-5p 1 0 0
chr1:156592197|156592471 hsa-miR-6829-3p 1 0 0
chr1:156592197|156592471 hsa-miR-10400-3p 1 1 0
chr1:156592197|156592471 hsa-miR-4723-3p 1 1 0
chr1:156592197|156592471 hsa-miR-3085-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6876-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6827-3p 0 1 0
chr1:156592197|156592471 hsa-miR-6504-5p 0 1 0
chr1:156592197|156592471 hsa-miR-6820-3p 1 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr1:156592197|156592471
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MGAAREESLSQPPGLGTKGWERQLGQYGLLPPETPPNHP
Nucleotide Sequence TTGGGAGCAGCCAGGGAGGAGTCACTGTCCCAGCCCCCTGGCCTAGGCACAAAGGGGTGGGAGAGACAGCTGGGCCAATATGGTCTATTACCGCCTGAAACCCCGCCGAACCACCCTTGA
CircID chr1:156592197|156592471
ORF Type ORF2
Protein Length 29
Nucleotide Length 87
Protein Sequence MSRSPPTVLVICGPGNNGGDGLVCARHLK
Nucleotide Sequence ATGTCCAGGAGCCCCCCTACTGTCCTGGTCATCTGTGGCCCGGGGAATAATGGAGGAGATGGTCTGGTCTGTGCTCGACACCTCAAA
CircID chr1:156592197|156592471
ORF Type ORF3
Protein Length 53
Nucleotide Length 159
Protein Sequence MVYYRLKPRRTTLDSAFRHIPPRPCPGAPLLSWSSVARGIMEEMVWSVLDTSN
Nucleotide Sequence ATGGTCTATTACCGCCTGAAACCCCGCCGAACCACCCTTGACTCTGCCTTCAGGCATATCCCCCCACGTCCATGTCCAGGAGCCCCCCTACTGTCCTGGTCATCTGTGGCCCGGGGAATAATGGAGGAGATGGTCTGGTCTGTGCTCGACACCTCAAAC
CircID chr1:156592197|156592471
ORF Type ORF4
Protein Length 27
Nucleotide Length 84
Protein Sequence MTLPSGISPHVHVQEPPYCPGHLWPGE
Nucleotide Sequence TTGACTCTGCCTTCAGGCATATCCCCCCACGTCCATGTCCAGGAGCCCCCCTACTGTCCTGGTCATCTGTGGCCCGGGGAATAA
CircID chr1:156592197|156592471
ORF Type ORF5
Protein Length 35
Nucleotide Length 108
Protein Sequence MRCRAQTRPSPPLFPGPQMTRTVGGLLDMDVGGYA
Nucleotide Sequence TTGAGGTGTCGAGCACAGACCAGACCATCTCCTCCATTATTCCCCGGGCCACAGATGACCAGGACAGTAGGGGGGCTCCTGGACATGGACGTGGGGGGATATGCCTGA
CircID chr1:156592197|156592471
ORF Type ORF6
Protein Length 57
Nucleotide Length 171
Protein Sequence MPEGRVKGGSAGFQAVIDHIGPAVSPTPLCLGQGAGTVTPPWLLPKVESCATDLGDG
Nucleotide Sequence ATGCCTGAAGGCAGAGTCAAGGGTGGTTCGGCGGGGTTTCAGGCGGTAATAGACCATATTGGCCCAGCTGTCTCTCCCACCCCTTTGTGCCTAGGCCAGGGGGCTGGGACAGTGACTCCTCCCTGGCTGCTCCCAAAGGTCGAGAGTTGTGCCACTGACCTTGGCGATGGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab