CircRNA Information

General Information
circRNA Basic Information
CircID chr1:156700611|156700958
Strand +
CircType exon
Host Gene ENSG00000143320.7;
Algorism CIRI2;
Sequence CTCCACCACCGTGCGCACCACAGAGATTAACTTCAAGGTTGGGGAGGAGTTTGAGGAGCAGACTGTGGATGGGAGGCCCTGTAAGAGCCTGGTGAAATGGGAGAGTGAGAATAAAATGGTCTGTGAGCAGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr1:156700611|156700958 hsa-miR-197-5p 0 0 1
chr1:156700611|156700958 hsa-miR-197-3p 0 0 1
chr1:156700611|156700958 hsa-miR-216a-5p 0 0 1
chr1:156700611|156700958 hsa-miR-216a-3p 0 0 1
chr1:156700611|156700958 hsa-miR-150-5p 0 0 1
chr1:156700611|156700958 hsa-miR-150-3p 0 0 1
chr1:156700611|156700958 hsa-miR-185-5p 0 0 1
chr1:156700611|156700958 hsa-miR-185-3p 0 0 1
chr1:156700611|156700958 hsa-miR-484 0 0 1
chr1:156700611|156700958 hsa-miR-504-5p 0 0 1
chr1:156700611|156700958 hsa-miR-504-3p 0 0 1
chr1:156700611|156700958 hsa-miR-552-5p 0 0 1
chr1:156700611|156700958 hsa-miR-552-3p 0 0 1
chr1:156700611|156700958 hsa-miR-558 0 0 1
chr1:156700611|156700958 hsa-miR-573 0 0 1
chr1:156700611|156700958 hsa-miR-596 0 0 1
chr1:156700611|156700958 hsa-miR-600 0 0 1
chr1:156700611|156700958 hsa-miR-621 0 0 1
chr1:156700611|156700958 hsa-miR-622 0 1 1
chr1:156700611|156700958 hsa-miR-657 0 0 1
chr1:156700611|156700958 hsa-miR-675-5p 0 0 1
chr1:156700611|156700958 hsa-miR-675-3p 0 0 1
chr1:156700611|156700958 hsa-miR-760 0 0 1
chr1:156700611|156700958 hsa-miR-216b-5p 0 0 1
chr1:156700611|156700958 hsa-miR-216b-3p 0 0 1
chr1:156700611|156700958 hsa-miR-933 0 0 1
chr1:156700611|156700958 hsa-miR-940 0 1 1
chr1:156700611|156700958 hsa-miR-1178-5p 0 0 1
chr1:156700611|156700958 hsa-miR-1178-3p 0 0 1
chr1:156700611|156700958 hsa-miR-1226-5p 0 0 1
chr1:156700611|156700958 hsa-miR-1226-3p 0 0 1
chr1:156700611|156700958 hsa-miR-1229-5p 0 0 1
chr1:156700611|156700958 hsa-miR-1229-3p 0 0 1
chr1:156700611|156700958 hsa-miR-1237-5p 0 0 1
chr1:156700611|156700958 hsa-miR-1237-3p 0 0 1
chr1:156700611|156700958 hsa-miR-1290 0 0 1
chr1:156700611|156700958 hsa-miR-1827 0 0 1
chr1:156700611|156700958 hsa-miR-1225-3p 1 1 1
chr1:156700611|156700958 hsa-miR-296-5p 0 0 1
chr1:156700611|156700958 hsa-miR-532-3p 0 0 1
chr1:156700611|156700958 hsa-miR-767-3p 1 1 1
chr1:156700611|156700958 hsa-miR-875-3p 0 1 1
chr1:156700611|156700958 hsa-miR-1207-5p 1 1 1
chr1:156700611|156700958 hsa-miR-1302 0 0 1
chr1:156700611|156700958 hsa-miR-220b 0 0 1
chr1:156700611|156700958 hsa-miR-371-5p 0 0 1
chr1:156700611|156700958 hsa-miR-1254 0 0 1
chr1:156700611|156700958 hsa-miR-3155a 0 1 0
chr1:156700611|156700958 hsa-miR-3183 1 0 0
chr1:156700611|156700958 hsa-miR-4298 1 1 0
chr1:156700611|156700958 hsa-miR-4308 1 1 0
chr1:156700611|156700958 hsa-miR-4258 0 1 0
chr1:156700611|156700958 hsa-miR-4254 0 1 0
chr1:156700611|156700958 hsa-miR-3686 0 1 0
chr1:156700611|156700958 hsa-miR-3943 0 1 0
chr1:156700611|156700958 hsa-miR-4469 1 0 0
chr1:156700611|156700958 hsa-miR-3155b 0 1 0
chr1:156700611|156700958 hsa-miR-4512 0 1 0
chr1:156700611|156700958 hsa-miR-4656 1 0 0
chr1:156700611|156700958 hsa-miR-4688 1 1 0
chr1:156700611|156700958 hsa-miR-4706 1 0 0
chr1:156700611|156700958 hsa-miR-4739 1 0 0
chr1:156700611|156700958 hsa-miR-5193 0 1 0
chr1:156700611|156700958 hsa-miR-5698 1 0 0
chr1:156700611|156700958 hsa-miR-6127 1 0 0
chr1:156700611|156700958 hsa-miR-7150 0 1 0
chr1:156700611|156700958 hsa-miR-7703 1 0 0
chr1:156700611|156700958 hsa-miR-7974 1 0 0
chr1:156700611|156700958 hsa-miR-8085 0 1 0
chr1:156700611|156700958 hsa-miR-12115 1 0 0
chr1:156700611|156700958 hsa-miR-370-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6749-3p 1 1 0
chr1:156700611|156700958 hsa-miR-6822-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6892-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6510-5p 0 1 0
chr1:156700611|156700958 hsa-miR-3692-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6873-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6746-5p 1 0 0
chr1:156700611|156700958 hsa-miR-4653-3p 1 1 0
chr1:156700611|156700958 hsa-miR-4755-3p 0 1 0
chr1:156700611|156700958 hsa-miR-6727-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6721-5p 1 0 0
chr1:156700611|156700958 hsa-miR-432-5p 1 1 0
chr1:156700611|156700958 hsa-miR-7110-3p 1 0 0
chr1:156700611|156700958 hsa-miR-7845-5p 1 0 0
chr1:156700611|156700958 hsa-miR-4725-5p 1 1 0
chr1:156700611|156700958 hsa-miR-6760-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6881-5p 1 1 0
chr1:156700611|156700958 hsa-miR-6728-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6810-5p 1 0 0
chr1:156700611|156700958 hsa-miR-4713-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6772-3p 0 1 0
chr1:156700611|156700958 hsa-miR-1247-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6749-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6809-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6739-3p 1 0 0
chr1:156700611|156700958 hsa-miR-149-3p 1 0 0
chr1:156700611|156700958 hsa-miR-4733-3p 0 1 0
chr1:156700611|156700958 hsa-miR-2276-3p 0 1 0
chr1:156700611|156700958 hsa-miR-6878-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6769a-3p 0 1 0
chr1:156700611|156700958 hsa-miR-6825-3p 1 0 0
chr1:156700611|156700958 hsa-miR-7112-5p 1 0 0
chr1:156700611|156700958 hsa-miR-423-5p 0 1 0
chr1:156700611|156700958 hsa-miR-4695-3p 1 0 0
chr1:156700611|156700958 hsa-miR-3158-3p 1 1 0
chr1:156700611|156700958 hsa-miR-1911-3p 0 1 0
chr1:156700611|156700958 hsa-miR-6828-3p 0 1 0
chr1:156700611|156700958 hsa-miR-6758-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6738-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6777-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6794-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6760-3p 1 0 0
chr1:156700611|156700958 hsa-miR-1285-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6768-3p 1 0 0
chr1:156700611|156700958 hsa-miR-2681-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6779-3p 1 0 0
chr1:156700611|156700958 hsa-miR-2116-3p 0 1 0
chr1:156700611|156700958 hsa-miR-550b-3p 1 0 0
chr1:156700611|156700958 hsa-miR-4763-3p 1 1 0
chr1:156700611|156700958 hsa-miR-6812-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6865-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6893-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6743-5p 1 1 0
chr1:156700611|156700958 hsa-miR-6754-5p 1 0 0
chr1:156700611|156700958 hsa-miR-7107-5p 1 0 0
chr1:156700611|156700958 hsa-miR-1249-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6722-3p 1 1 0
chr1:156700611|156700958 hsa-miR-6780a-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6797-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6808-5p 0 1 0
chr1:156700611|156700958 hsa-miR-3127-3p 0 1 0
chr1:156700611|156700958 hsa-miR-3620-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6836-5p 0 1 0
chr1:156700611|156700958 hsa-miR-1909-3p 1 1 0
chr1:156700611|156700958 hsa-miR-328-5p 1 0 0
chr1:156700611|156700958 hsa-miR-4726-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6794-5p 1 0 0
chr1:156700611|156700958 hsa-miR-4769-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6758-5p 0 1 0
chr1:156700611|156700958 hsa-miR-6856-5p 1 1 0
chr1:156700611|156700958 hsa-miR-3116 0 1 0
chr1:156700611|156700958 hsa-miR-4646-5p 1 0 0
chr1:156700611|156700958 hsa-miR-6724-5p 1 1 0
chr1:156700611|156700958 hsa-miR-6862-3p 1 0 0
chr1:156700611|156700958 hsa-miR-483-3p 1 0 0
chr1:156700611|156700958 hsa-miR-6823-3p 0 1 0
chr1:156700611|156700958 hsa-miR-550a-3p 1 0 0
chr1:156700611|156700958 hsa-miR-5571-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr1:156700611|156700958
ORF Type ORF1
Protein Length 43
Nucleotide Length 129
Protein Sequence MLTDHFILTLPFHQALTGPPIHSLLLKLLPNLEVNLCGAHGGG
Nucleotide Sequence CTGCTCACAGACCATTTTATTCTCACTCTCCCATTTCACCAGGCTCTTACAGGGCCTCCCATCCACAGTCTGCTCCTCAAACTCCTCCCCAACCTTGAAGTTAATCTCTGTGGTGCGCACGGTGGTGGA
CircID chr1:156700611|156700958
ORF Type ORF1
Protein Length 28
Nucleotide Length 84
Protein Sequence MGPAHLATCLLQSLVKWESENKMVCEQK
Nucleotide Sequence ATGGGCCCAGCTCACTTGGCCACCTGTCTCTTGCAGAGCCTGGTGAAATGGGAGAGTGAGAATAAAATGGTCTGTGAGCAGAAG
CircID chr1:156700611|156700958
ORF Type ORF2
Protein Length 42
Nucleotide Length 129
Protein Sequence MLTDHFILTLPFHQALQETGGQVSWAHSRGNAVRGIRERAPF
Nucleotide Sequence CTGCTCACAGACCATTTTATTCTCACTCTCCCATTTCACCAGGCTCTGCAAGAGACAGGTGGCCAAGTGAGCTGGGCCCATAGCAGGGGCAATGCAGTGAGAGGGATAAGGGAGAGAGCCCCTTTCTAG
CircID chr1:156700611|156700958
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MTLEPLLALTLQGLPSTVCSSNSSPTLKLISVVRTVVE
Nucleotide Sequence ATGACCCTGGAGCCCCTTCTGGCACTCACCTTACAGGGCCTCCCATCCACAGTCTGCTCCTCAAACTCCTCCCCAACCTTGAAGTTAATCTCTGTGGTGCGCACGGTGGTGGAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab